Acanthopagrus latus (yellowfin seabream): 119007210
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Entry
119007210 CDS
T08233
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119007210 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119007210 (atrx)
03036 Chromosome and associated proteins [BR:
alat03036
]
119007210 (atrx)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
119007210 (atrx)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
119007210 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119007210
NCBI-ProteinID:
XP_036932595
LinkDB
All DBs
Position
18:complement(18026723..18056384)
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AA seq
2013 aa
AA seq
DB search
MSLASSESNLDQMADKAEEPGSSAETMKPSSSRNKRKPATVAKHTGLNESDTSPDSENED
ATSDNPSDSNTGSASKGTLVMRPAGNENKGAMKLRVDFKLKTSDDTLQKKVSCTACGKQV
NQFQCNSVYEHPVLKVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNA
FCKKCILRNLGRKELSAITDENSKWHCYVCRSEPLQDLVSKCHSVIQKQLIQQKKDKTEG
RESKRHKNKAVKEHKAIVNGKEHNEGSGTMTFSYKKLQVPKELIKKTKKLVETTTGLNNT
FVQFIQQAAEEQGDKSIRYRHLKAFKAVLADLKKAHSALEEALGPEFKNMEMRNGNERQH
IVRKSTDVLAPVENDHVDNVEDEVDEADGADEEDEPQDEEQAEEQHAEQAVDNDQVSGDT
EMKDDQTETDDTKKDIKTDVSEDGLVSAGEMSLDHDIMSVPPSVPEELFQMVESLADSNM
LSQTETDSVTDAEKDTENKKSNGNATDAKRPQPKVKNLIVKLTPVPVVTTCGSRSSRSKN
KEKDEGTQKEPKEESENQGEEQEKDIASDTLDGTNSPPPSRRSSRVKTTPLRKQAENKSK
EDSSDSESEDDSKSQAKSSKKLSNTKKEDEKQSRASEKKTVDSDSDEVPSALLEKAAAGH
STDEEPESTSAKKRLFKLNNTSTDSASKRKRKSESSDSDLENKSRKTYKKKKQKGSDSSN
SDSDQEKETKRKGGTAKRRSSRVKKQDGAKEDSSPEKKAADRKRSYEKKRKGRSSKSASK
LQSSSSEDEEEQQDDSGEDSDAQKIKPIVEDNVMEGGGPFQQSSGDEVDDKGKVSRVCED
DDDDDPENRIAKKMLLAQIKSNYSSGAESSSDNEGADKDKNSSNKVKKEDEDEDEEAQEE
DSEASSSDVEVKKRGRGHKLLRHKLSLSEGESGEEKTEKKKGGKKKSQNKVDSDDSEDSD
FEKSESSAESGISEELSESENEGKRRKTRSSKKKKDEEKQRSYNQKKKRRRIKVQESSSS
NEKSGEEGDEEDRKGRKKLRKILKDDKLRTETRDALKEEEERRKRIAEREELRKKLREVI
EVEESPQVTCPITTKLVLDEDEETKEPVVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKK
IEKSPGSGCILAHCMGLGKTLQVVTFLHTLLLCDKLDFTTALVVCPLNTVLNWLNEFEKW
QEGMKDEESLEVTELATVKRPQERAYALQQWQENGGVMIIGYEMYRNLTQGRNIKSKKLK
ETFQKTLVDPGPDLVICDEGHILKNEASAVSKAMNSVRTRRRVILTGTPLQNNLIEYHCM
VNFIKENLLGSVKEFRNRFINPIQNGQCADSTLHDVRIMKKRAHILYEMLAGCVQRKDYT
ALTKFLPPKHEYVLSVRVTPIQCKLYRYYLEHFTGVGNAMEGGRGRAGTKLFQDFQMLSR
IWTHPWCLQLDYISKENRGFFDEDSMDEFIASETEESSMSMTSEDERMKKKKKQGKGKKK
GSDDSDSDDVEVIKEWNTSSRGRNGEGRKREPPVEEPPPAPSSTPGSPTPDWHKEFVTEA
DAEILEHSGKMVLLFEILRMAEEVGDKVLVFSQSLISLDLIEDFLELSTRAKDDEEKISP
YKGDGVWYRNIDYYRLDGSTSATTRKKWAEEFNDTSNTRGRLFLISTRAGSLGINLVASN
RVIIFDASWNPSYDVQSIFRVYRFGQLKTVYVYRFLAQGTMEEKIYDRQVTKQSLSFRVV
DQQQIERHFTTNELAELYTFEPDLLDDPSEKKSKKATPLLPKDPFLAEMLQNNKDQIACY
HEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRTNYQASYAQMDMGSTSYFSYNVA
ALASMTNQQLEDLVNQGRQKVIEATNALKTLSRETLEDIIARVWKENPSLTESQVQSMAL
GRQASVELEFKRREVVYRDVLTRQQTLMMFVQKLITNRKVQEQQMAMANQASYLNQLVQN
SMLGGNQLSQMDLLGIYQQLHGLGKNPGPSKGL
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcctcttctgaatcaaacttagaccaaatggcagacaaagcagaagagcct
ggtagctcagcagaaactatgaagccctcctcttctcgcaacaagaggaagcccgctact
gtagctaagcacactggactgaatgaatccgacacctctcctgacagtgaaaatgaagat
gccacttctgacaatccttcagacagtaacacaggcagcgcatcaaaaggcactttagtg
atgaggccagctgggaacgaaaataaaggcgccatgaagctcagagtggatttcaaactg
aaaacttcagatgataccctgcagaagaaggtgagctgcactgcctgtggaaaacaagta
aaccagtttcagtgcaactctgtgtatgagcatcctgtgctcaaagtacttatttgcaag
tcatgctacaagtattacacgagtgatgacatcaacagagactctgatgggatggatgag
cagtgcaggtggtgtgccgaaggtggtaagctcatctgctgtgactactgcaacaacgcc
ttctgtaagaagtgcatcctgcgcaacctggggaggaaggagctgtctgccattactgat
gagaactcgaagtggcactgctatgtctgcaggtcagagcccctccaggatctggtctcc
aaatgccacagcgtcattcaaaaacaactaattcaacaaaaaaaggataaaacagaggga
cgagagagcaagagacacaagaacaaagcagtcaaagagcacaaagctattgtcaatgga
aaagaacacaatgaaggctcagggaccatgacattctcctacaaaaaactacaggtaccc
aaagaactcataaagaaaacaaaaaagcttgttgaaactacaacaggtctgaacaatacg
tttgtccagttcatccagcaggcagcagaggagcagggagataagtctatcaggtatcgc
catttgaaagccttcaaggccgtgcttgccgatttgaaaaaagcccacagtgctctggaa
gaggctctcggcccagagttcaaaaacatggagatgcggaatggtaacgagaggcaacat
attgtgagaaagagcactgatgttttggcgcctgtagagaacgaccatgtggataatgtg
gaggatgaagttgatgaggctgacggagcagacgaggaggatgagcctcaggacgaggaa
caggcagaggagcagcatgctgagcaggctgtggacaatgatcaagtgtcaggtgacact
gaaatgaaagatgaccaaacagaaactgatgacaccaaaaaagacattaaaactgatgtc
agtgaggatgggctggtctcagccggtgaaatgtccctagatcacgacattatgtctgtg
cctccctcagtgccggaagagctttttcagatggtcgagagtcttgcagattctaacatg
ctgtcacagactgagactgattcggtcacagatgctgaaaaagacactgaaaataaaaag
tcaaatggtaacgcaacggatgctaagcgcccccaacccaaggtgaagaacctgatagtg
aaactgactcctgtgccagtcgtgacaacgtgtggttcaaggtcatctcggtccaaaaac
aaagaaaaagatgaagggacacagaaagagcctaaagaagaatcagaaaaccaaggagaa
gaacaggagaaagacattgcttctgacacattagatgggacaaatagtccaccacctagc
cgtcgatctagtagagtgaagaccactcccttgaggaaacaggctgagaataagagcaag
gaagattcctctgactctgagtcagaggacgatagtaagagccaggctaaatcctcaaag
aaattgagtaacaccaaaaaagaggatgagaagcagagcagggcttcagagaaaaagaca
gtggactctgactcggatgaagttcctagcgcactgctggagaaagctgcagctggccac
agcacagacgaggaaccggaaagcacaagtgctaaaaaacgtttatttaaactaaataac
acatccacagacagtgcgtcaaagcgcaaaaggaagtctgaaagctctgattcagacttg
gagaacaaaagtagaaagacatataagaagaagaaacagaaaggctcagattcgtctaac
tcggattctgaccaggagaaggagacaaagaggaaagggggcacagcaaagaggaggtcc
agccgcgtgaagaaacaagatggagctaaagaagacagctcacctgagaagaaggcagca
gaccggaaaaggtcttatgaaaagaagcgcaagggaaggagctccaaatcagcctccaaa
ctgcagtcgtcctccagcgaggatgaggaggagcagcaggatgactctggggaggacagt
gacgcacaaaagatcaaacccattgtggaggataacgtgatggaaggaggtggacctttc
caacaatcctcaggagatgaagtggatgataaagggaaagtctctcgggtttgtgaagat
gatgacgacgatgatcctgaaaacaggattgcaaagaaaatgcttcttgcccaaataaaa
tcaaattattcttcaggagcagagagctcctctgataatgaaggagcagataaagataaa
aattcctccaacaaagttaaaaaagaggatgaagatgaagatgaagaagcacaagaagag
gattcagaagcctcaagttctgatgtcgaagtgaagaagcgtggcagaggccacaaattg
cttcgtcataagctgtccctgagtgagggcgaatcgggagaggagaaaactgagaagaag
aaagggggcaagaagaagtcacagaataaagtagacagcgatgactctgaagattcagac
ttcgagaaatcagagtccagcgctgagtctgggataagtgaggagcttagtgagtcagaa
aatgaggggaagcgtcgaaagaccagatcctctaagaagaagaaggatgaggagaaacag
agaagttacaatcagaagaagaagcgacgcaggatcaaagttcaggagtcctcttccagc
aatgagaagagcggagaggaaggtgatgaggaagatcgcaaaggacgcaaaaagcttcgc
aaaattctgaaggacgacaaactgcggacagagacgagagatgcactgaaagaagaggag
gagaggaggaaacgtatagcggagagagaggaactcaggaagaaacttcgagaggtgata
gaagtggaagagtctccccaggtgacttgtcccatcaccaccaagctggtgctggatgag
gacgaagagaccaaggagccggtggtgcaggtgcacaggaatcttgtcacaaagcttaaa
cctcaccaggtggatggggtgcagttcatgtgggactgctgctgtgaatctgtgaagaag
atcgagaagtctcctggctctggctgtatcctcgcccactgtatggggctgggaaaaact
ctgcaggtggtgacattccttcacactttgttgctctgtgacaagctcgacttcaccaca
gccctggtggtttgtcccctgaatactgtccttaattggctcaatgagtttgagaagtgg
caggagggaatgaaggatgaggagagtttagaggtaactgagctggccacagtaaagagg
cctcaggagcgagcatacgccctccagcaatggcaagagaatggcggcgttatgatcatt
ggctatgagatgtacagaaatcttacgcagggcaggaacattaagagcaagaagctcaag
gagacctttcagaagacactggtagatccaggtccagacttggtgatctgcgatgaaggg
cacatcctgaagaacgaggcgtctgcggtgtccaaagcgatgaactctgtcaggacgagg
aggagggttatactaactggaactcctctgcaaaacaaccttattgaataccattgcatg
gtgaacttcatcaaggaaaaccttcttggttcagtcaaggagttcagaaaccgcttcatt
aacccaatacagaatggtcagtgtgccgactccacattacatgatgtccggattatgaag
aagagggctcacatcctctatgagatgctggctggctgtgtccagaggaaagattacaca
gcgctcaccaagttcctgcctcccaagcatgaatatgtgttgtcggtgagggtcactcca
atccagtgcaaactctacagatactacctggagcacttcacaggtgtggggaacgctatg
gaagggggccggggccgcgccgggaccaaactcttccaggatttccagatgctaagcaga
atctggacccatccatggtgccttcagctggactacatcagtaaagaaaacaggggcttc
tttgacgaagacagtatggatgagttcatcgcctcagaaactgaagaatcatccatgagt
atgacctctgaagatgaaaggatgaaaaagaaaaagaagcaagggaaggggaaaaagaag
ggatctgatgactcggacagtgatgacgtggaggtcatcaaggagtggaacaccagctct
cggggtagaaacggagagggtcgaaagagagaaccgcctgtagaggaaccacctccggcc
cctagctctacaccaggaagtcccactcctgactggcacaaggagtttgtgacggaggct
gacgctgaaatcctcgagcactctggaaagatggtgctcctctttgagatcctgcgcatg
gccgaagaagtaggagataaagtgttggtgttcagtcagtctctcatctctctggacttg
attgaggatttcctggaactatctacaagagctaaagatgatgaggaaaaaatctctccg
tacaaaggtgatggagtatggtacaggaacatcgactactatcgcctggacggctccacc
agtgccaccaccaggaaaaagtgggctgaagagtttaacgacaccagtaacacaagaggt
cgtttgttcctcatttcaacacgagctggctcacttggaatcaacctggtggcctccaac
agagtcatcatctttgatgcctcctggaacccttcctacgacgtgcagagtatcttcagg
gtctaccgcttcggccagctaaagacggtctatgtgtacaggttcttggcccagggtaca
atggaggagaagatttacgaccggcaggtaaccaaacagtctctgtcattccgggtggtg
gaccagcagcagatagagcgtcactttacgacgaatgagctggccgaactctacaccttt
gagccggacctgctggatgatccctcagagaagaagagcaagaaagccacgcccttgctc
cctaaggatcccttcctggctgagatgctgcagaacaataaggaccagattgcatgttac
catgaacacgactctttgctggaccacaaggaggaggaggccctgagcgaggaggatcgc
aaggctgcctgggccgagtatgaagcagagaaaaagggtctgtccatgaggaccaactac
caggcgtcatacgcccagatggacatgggctccaccagctacttctcctacaacgtggcc
gctttggcctccatgaccaaccagcagctggaggaccttgtaaaccagggacgacagaaa
gtcatcgaagcaacaaatgcattgaagactttgtcacgggagacgctagaggatattatt
gccagagtgtggaaggagaacccgtcactcacagagagtcaggtccagtcgatggctctg
ggtcgacaggccagcgtggagctggagttcaagcgcagggaagttgtgtacagggacgtc
ctcaccaggcagcagacgctgatgatgttcgtgcagaagctgatcaccaacaggaaggtg
caggagcagcagatggccatggccaaccaggccagctacctgaaccagctggtgcagaac
agcatgttgggaggcaaccagctcagtcagatggacctgctggggatttaccagcagctc
cacggcctgggtaaaaatcctgggccctccaagggcctgtag
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integrated database retrieval system
