Acanthopagrus latus (yellowfin seabream): 119007255
Help
Entry
119007255 CDS
T08233
Symbol
vimr2
Name
(RefSeq) peripherin isoform X1
KO
K07606
vimentin
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119007255 (vimr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119007255 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alat04812
]
119007255 (vimr2)
04147 Exosome [BR:
alat04147
]
119007255 (vimr2)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
119007255 (vimr2)
Cytoskeleton proteins [BR:
alat04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
119007255 (vimr2)
Exosome [BR:
alat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119007255 (vimr2)
Exosomal proteins of other cancer cells
119007255 (vimr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
ATG16
DUF7801
EAD9
RNase_E_G
ACBP4_C
AAA_13
BBP1_C
UPF0242
Motif
Other DBs
NCBI-GeneID:
119007255
NCBI-ProteinID:
XP_036932689
LinkDB
All DBs
Position
18:complement(25484888..25504327)
Genome browser
AA seq
389 aa
AA seq
DB search
MAVLRVSSYRKLFEEESWSRNGGLSSSIRGAAVDKCDCDKLDFVAAKELNKEGLTRFVQD
RNVIAALNDRLVRLIELAHCFEEENESLEWQIAELEEKLKGRQASSSSGITSAVLVPDYS
LDAVVERLRREKDEILCHTEELQKELERLMQEYEAAAQQRIFLQQERHDVAEEVDAVTAG
CLALREQVAIYEEQLANMEAQHKTEVETLLDPAEGAAGAVAAIRFGSPDITPALDVKEYY
CQLAESLQYDRGAASSAQVRSGDGKQLEVGGAAGSTVRDLSEMKDPSEMKALISELRKEL
AELEKCNEELEDEVDVKTAAYMDEIAELECTIDEMRHQDADFQVQMQEQVEDYKQLLSEK
MARDMEITAYRCHVQHEGGRGDAGTTWSD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgctcagagtgtcttcttaccgcaagctgttcgaggaggaaagctggagtcga
aatggagggttgagttcctccatcaggggtgcggctgttgacaagtgcgactgtgacaag
ttggacttcgtcgctgccaaggagctgaacaaggagggtctgacccggtttgtccaggac
cgcaacgtcatcgctgccctcaacgaccgcctggtccggctgattgaactggctcattgt
ttcgaggaggagaacgagtctctggaatggcagattgccgaactggaggagaagctgaag
ggtcgtcaggcctcctcctcctccggcatcacctccgccgtgctggtgcccgactacagc
ctggacgcggtggtggaaagactgcgcagggagaaggatgagattctgtgccacaccgag
gagctgcagaaggagctggagcgtctgatgcaggagtacgaggcggcggcgcagcagagg
atcttcttacagcaggagcgacacgacgttgcagaggaagtggacgccgtgacagcagga
tgtttggcactgagggagcaagtggctatctacgaggagcagctggccaacatggaggcc
cagcacaagacggaggtggagactctgctggatccagctgaaggggctgcaggggcggtg
gcagccattagatttggcagccccgacatcactccggccttggatgtaaaggagtactac
tgccagctggccgagagcctccagtacgatcgcggtgcagcgtcgtctgctcaggttcgc
agcggtgatggaaaacaactggaagtgggcggagctgcagggtcgacagtcagagacctg
tcagagatgaaggaccccagtgagatgaaggcgctgatttcagagctgcggaaggagctc
gctgagctggagaagtgtaacgaggagctggaggacgaggtcgacgtgaagacggctgcg
tacatggacgagatcgctgagctggagtgtaccatagatgaaatgcggcaccaggacgcc
gacttccaagtgcagatgcaggagcaggttgaagactacaagcagctgctgagtgagaag
atggccagagacatggagatcactgcctacagatgtcatgtgcagcacgagggaggacga
ggagacgctgggacaacgtggtccgactga
DBGET
integrated database retrieval system
