Acanthopagrus latus (yellowfin seabream): 119007258
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Entry
119007258 CDS
T08233
Name
(RefSeq) coatomer subunit beta'-like
KO
K17302
coatomer subunit beta'
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119007258
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119007258
Membrane trafficking [BR:
alat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119007258
Exosome [BR:
alat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119007258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_Vps41
PH_SPO71
Motif
Other DBs
NCBI-GeneID:
119007258
NCBI-ProteinID:
XP_036932706
LinkDB
All DBs
Position
2:complement(25185277..25198208)
Genome browser
AA seq
1216 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMVVSLYSGTLVVWNHESQTMVKTFELCDLPV
RVAKFVARKHWVIAGADDMLIRVFNYNTLERVHMFEAHADYIRCIAVHPTQPYILTSSDD
MLIKLWDWDRKWSCSQVFEGHTHYVMEIVINPKDNNQFASASLDRTIKVWQLGSKTPNFT
LEGHEKGVNCIDYYCGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVTCVSFHPE
LPIILTGSEDGTVRVWHSNTYRLENTLNYGMERVWCISGQPGSNSVAIGYDEGSIIIKLG
REEPAMSMDSSGKVMWARHSEVQQANLKAMGDTEIRDGERLPLGVKDMGSCEIYPQTIQH
SPNGRFVMVCGDGEYIIYTAMALRNKSFGSAQEFIWAHDSSQYATREGNSMVKIFKNFKE
KKAFKPDFGAEGIFGGFLLGVRSNSGLAFYDWETAELIRRIEIQPKHIFWSDSGELVSIA
TDESFFVLRYQPERVAAAVESKETIPEDGIEDAFEVLGEVPEVVKTGVWVGDCFIFTSSL
NRLNYYVGGEIITVAHLDRTMYLLGYIPKDDRLYLGDKELNIISFSLLLSVLEYQTAVMR
RDFGTADKVLPTIPKEQRIRVAHFLEKQGFRQQALAVSTDPEHKFELALQLGEVKIAYEL
ALEAESEQKWKQLAELATTKCQFSLAQECLHQAQDYGGLLLLATASGNADMVGKLAEGSE
RDGKTNVAFLTCFMQGRLDKCLELLIKTDRLPEAAFLARTYLPSHVSRVVGLWKESLSKV
NQKAADALADPGQYGNLFPGLQQAVLAEQYLKETHVRVRPAAEYPLVMPNEDRDVLEEFA
SFVLKGGLNEPEEVMKSRNEPVIAAAVTEAAPAEPEVVEELIPPKQEIIDPVSSTEEESI
PAPSSPVPVTVTEEHVEPHQAESVAVTKSEEASVSEEEDVARSTTEITPTEPEMVQSSPM
DDVSSSAETEVEDISPAADDVTAATETLTETTSEIIVATEETPSEAVMTETIATEDVLVE
MGLTVDTDITESIATEVMSVDEEVETDIISSEAPAVTDSVAAAAAAETRVTEELVSETAP
SPVTVEELISFENTHSPVLDAPVQVQTVSDLALDPFLDPFGDIMPVPKPVTAQEPEQEEL
ATTLPVKPEDNLEAAAVPAEGDAAEQGAAPEGTEEMAEDLEAELNEDALDDLDLDNFDLE
DIDTTDVNLDDDFLND
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcggttggacatcaagaggaagctgacggcccggtcagaccgggtgaagagc
gtggacctgcaccccactgagccgtggatggtggtcagcctctacagcggcactctggtg
gtctggaaccacgagtcacagacgatggtgaaaacgttcgagctgtgtgatctgcctgtc
agagtggccaagtttgtagccaggaaacactgggtcatcgccggagcagatgacatgctg
atccgtgtgttcaactacaacactctggagcgggttcacatgttcgaggctcacgctgac
tacatccgctgcatcgccgtccaccccacgcagccctacatcctcaccagcagcgatgac
atgttgatcaagctgtgggactgggacaggaagtggtcatgcagccaagtgtttgagggg
cacactcattacgtcatggagatcgtcatcaaccccaaagataacaaccagttcgccagc
gcctctctggacagaaccattaaggtgtggcagctgggctccaagactcccaacttcact
ctggagggccatgagaagggagtgaactgtatcgactactactgcggaggggacaagccc
tacctcatatcaggggctgacgaccgcctggtgaagatctgggattatcagaacaaaacc
tgcgttcagactctggagggtcacgcccaaaacgtgacctgcgtcagcttccatccagag
ctgcccatcatcctcacgggctccgaggatggcacagttcgagtgtggcactccaacacc
taccgactagaaaacacgctcaactacggcatggagagggtgtggtgtataagtggccag
cctggctccaacagtgtggctataggctacgatgaaggcagcatcatcatcaagctgggt
cgggaggagccggccatgtccatggactccagtgggaaggtcatgtgggcccgccactcc
gaggtgcagcaggccaacctgaaggccatgggagacacggagatcagggacggggagagg
ctgccgctgggtgtcaaagacatgggcagctgcgagatctaccctcagaccatccagcac
agccccaacgggaggtttgtcatggtgtgcggagatggggagtacatcatctacaccgcc
atggccctgaggaacaagagctttggctcagctcaagaatttatctgggcgcatgactcc
tcacagtatgccaccagggaaggcaacagtatggtcaaaatatttaagaactttaaagag
aagaaggcttttaaacctgactttggagcagaaggtatcttcggtggcttcttgctggga
gtgaggtcaaacagcggcctggccttctacgactgggagaccgcggaactgatccgccgc
atcgagatccaacccaaacatatcttctggtctgactctggggagcttgtgtctatcgct
acagatgagtctttctttgtgctgcgctaccagccagagagagtggcagcagccgtggag
tctaaggaaaccatcccagaagatgggatagaggacgcctttgaggtcctgggggaggtc
ccagaggtggtgaagacgggggtttgggtgggagactgcttcatcttcaccagctctctc
aacagactcaactactatgttggaggagagatcatcaccgttgctcacctcgacaggacc
atgtacctgctgggttacatccccaaggacgaccgtctctacctgggagacaaggagctg
aacatcatcagcttctccctgctgctgtcagtgctggaataccaaacagctgtcatgagg
agggacttcggcacagccgacaaggttctacccacaatccccaaggagcagaggattagg
gtagcccactttctggagaaacagggcttcagacagcaggccctggctgtgtccactgac
ccagaacacaagtttgaactggccctgcagctgggagaggtgaagatagcctacgagctg
gccttggaggcagagtcagagcagaaatggaagcagctggcagagctcgccacaacaaag
tgccagtttagcttggcccaggagtgtctgcaccaggctcaggattacgggggattattg
ctgttggccaccgcctcgggcaacgccgacatggtgggcaaactggcagaggggtcagag
agggacgggaagaccaacgtggcctttctcacctgcttcatgcagggaagattggacaaa
tgtctggagcttctcatcaaaacagatcgattgccagaggctgcatttctggcaagaaca
tatctgcccagccatgtgtcaagggtggtggggctgtggaaggagagtctgtccaaggtc
aaccagaaggcggcagatgctctggctgaccccggccagtacggcaacctgttccctggc
ctccagcaagccgtgctggctgagcagtacctcaaggagactcacgtcagggtcaggccc
gctgcagaatacccactcgtcatgccaaatgaggaccgtgatgttctggaggaatttgcg
agttttgtgctcaaaggagggctcaacgagccagaggaagtcatgaagagcaggaatgaa
cccgtcatagcagcagcagtgacagaagctgcacctgcagaaccagaagtggtggaggaa
ctcatcccaccaaaacaggagatcattgatcctgtgtcatcaactgaggaagagtccatc
ccagcaccatcatcccccgtgcctgtcacagtgacagaggagcacgttgaaccgcaccaa
gcagaatctgtcgccgtcactaaatcagaggaggcttcagtctctgaagaggaagatgta
gcacggtcgaccacagagattacccccacagagccagagatggtacagtccagccccatg
gatgatgtcagctcatcagctgagacggaggttgaggacatttctccagccgccgatgac
gttactgctgccactgaaacactaactgagacaacatcagaaatcatcgtggcaacagaa
gaaacgccaagtgaggcagtgatgacagaaaccatagcaacagaggatgtcctagttgag
atgggtctgacagttgataccgatataacagagtctatagcaactgaggtaatgtctgtt
gatgaagaagtggaaacagacatcatctcctcagaagcaccagccgtcacagattcagta
gcagcagcagcagcagcagagactcgtgttactgaggaactggtctcagaaactgcacca
tcacctgtaacagtggaggagcttatctcctttgaaaacacacacagtccagtgctggat
gcgcccgtccaagtccagaccgtttcagatttggccctcgatccattcctagacccgttt
ggagatataatgccagtaccgaagccagtcacagctcaagaaccagaacaagaggaacta
gccacaacactcccagtgaagcctgaggacaacctggaggctgctgccgtccctgcagag
ggcgacgcagcagagcagggggcagctcccgagggaactgaggagatggcagaggacctc
gaggccgagctgaacgaggatgccctggatgatctggatctggacaactttgacctggaa
gacatcgacaccacagatgtcaacctggatgacgatttcttgaatgattag
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integrated database retrieval system
