Acanthopagrus latus (yellowfin seabream): 119007262
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Entry
119007262 CDS
T08233
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119007262 (rlim)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119007262 (rlim)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119007262 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Gp5_trimer_C
Prok-RING_4
zf-RING_16
zf-RING_4
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
119007262
NCBI-ProteinID:
XP_036932709
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All DBs
Position
18:complement(17853404..17860287)
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AA seq
808 aa
AA seq
DB search
MEGSDSLEQGGGEQPESQRRRQQDRLGREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEPQNNTPSTENGEDPVEPPESSEDPASGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQETSGQAPGEAPGEA
PGEAPGEAPGEAPGETPDEAPGEAIDVVSSEVAAMVSSEVAAMVSSEVAAAVSSEVVADV
AAEVSSEVAAAASSEVAAAASSEVAAAASSEVAAAASSEVAAAASSEVAAAVSLELADAE
SSEVAAAASSEMAPAVSSEMAPAVSSQMAPEISSEVSSEGQDLAPDAEPQVPMETEVVEE
PVVEELAVIVEPEPELEEVVSQEILGEPPSSPTVLPVQPPPSPSPRRGQRRPRSRSPEPR
RTRARTARSRSPLSLDQLDGLPNPRYVQSLPGSNSGPNALPVPQVEGSSRTRQHILSRQS
TVDSDVQPSLAGAESVPEVPNVGSQEGEAAGGEGGAAGRRPPTIMLDLQVRRVRPGEYRQ
RDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLG
EATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGANTPADLAEALNNADTTPAAAPT
ADVDEPPVAAGVRARTAETDVDESLATGQPASGGRARPRPPISLEEPSSLPFLRLAHFFL
LNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHC
IDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtttagagcaaggtggaggtgagcagccggagtcacagcgcaga
aggcagcaagatcgtctgggcagggaggaggccttctatcagtttgtcaacaatctcagt
gatgaggactatcgtctcatgagagacaacaatcttttgggcaccccaggcgaggtaaca
gaggatgagctgtttagtagacttcagcaaatcaaagatggtccagaaccgcagaacaac
actcccagcactgaaaatggagaagatccagttgagccaccagaaagctctgaagatcct
gccagtggtgacagtctattggactggctgaacacagtgaggcgcactggcaatacaacc
agaactggtcatcgtggaaaccagtcatggcgggcagtgagccagaccaacccaaacagt
ggcgattttcgcttcagcctggaaatcagtgtgaaccgcaacctggctgaacagcaagcc
gctgctgaaggagagcaggagacttcagggcaagctccaggagaagctccaggagaagct
ccaggagaagctccaggagaagctccaggtgaagcaccgggagaaactccggatgaagct
ccaggtgaagctatagatgtggtgtcctcagaggtggctgcaatggtgtcttcagaagtg
gctgcaatggtgtcctcagaggtggctgcagcggtgtcctcagaggtagttgcagatgtg
gctgcagaggtgtcctcggaggtggcagcggccgcgtcctcggaggtggcagcggccgcg
tcctcggaggtggcagcggccgcgtcctcggaggtggcagcggccgcgtcctcggaggtg
gcagcggccgcgtcctcggaggtggctgccgcggtgtccttggagttggctgatgcagaa
tcctcggaggtggctgcagcggcgtcctcggagatggctccagctgtgtcctcggagatg
gctccagctgtgtcctcacagatggctccagagatttcctcagaggtatcttcagagggt
caagatttggcgccagatgctgaaccacaggtccccatggagacagaagtggtggaagaa
ccagttgtagaagagttggcagtcatagttgaaccagaacctgaactagaagaggttgtg
tcacaagagattttaggggaacctcccagctcacctactgttctgccagtacaacccccg
ccttctccttctccgcgcagaggtcaacggagaccccgcagccgcagtccagaaccacgc
aggacaagggcccgtacagccaggagccgctcccctctcagcttggatcaactggatggt
ctccctaatccacgatatgttcagagccttccagggtccaactctggccccaatgccctc
cctgtgcctcaagtggagggcagttcacggactcgacaacacattctttccaggcaaagc
actgttgacagtgatgttcagccatctctggctggtgcagaatcagtcccagaggtccca
aacgttggatctcaggaaggagaagctgctgggggtgaagggggtgcagcggggcggcgc
ccccctactattatgcttgatctccaggtgcgccgtgtgcgtccaggtgaatatcgccaa
agagacagcattgctagtcgtacccgctcacgctctcagaactcaaataacacatttctt
tatgaaagtgaacgtggtggatttcgtaggactttctcacgctctgagcgtgctggtgtg
aggacctacgtcagcacaattcgcatccctatccgtagaatctctgatgcaggtcttgga
gaggctacctcaatggctctccaatcaatgattcggcagataatgactggttttggtgaa
cttggctacctcatggattcagactccgattcttcagattcaaaccgtggagccaacaca
cctgcagatctggctgaagccctcaacaatgcagacactactcctgctgctgctcctact
gctgatgttgatgaaccacctgtagctgctggagtcagagcaaggacagctgagactgac
gtggatgagagccttgccactggtcagcctgcctctggtggcagggcccgacctagacca
cctattagcctagaagagcccagctcgctgcccttcttgaggctcgcccacttcttcctc
ctaaatgatgatgacgaggaccagccccaaggactgaccaaagagcagattgacaacctc
tccatgcgtaactttggtgagagtgatgccttgaagacttgcagtgtctgcataacagag
tatgcagagggcaacaagcttcgtaagctgccctgttctcacgagtaccatgtgcactgc
attgatcgctggctgtctgaaaactcgacatgccccatctgccgcagggctgtcttggta
tcggccaaccgagagagtgtggtgtag
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