Acanthopagrus latus (yellowfin seabream): 119007280
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Entry
119007280 CDS
T08233
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat02010
ABC transporters
alat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119007280 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119007280 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alat02000
]
119007280 (abca1b)
Transporters [BR:
alat02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119007280 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
119007280
NCBI-ProteinID:
XP_036932729
LinkDB
All DBs
Position
18:complement(1096723..1142428)
Genome browser
AA seq
2295 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLVEIIWPLLIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWLQGILCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
NLDGFKELAQALQALQNSQSGFQLRHFLQDEETVSDFLRSNASFSEHDVQQIRDADINLE
KVLLRGFGVHLRDMCPRRGSGRSLEDFVMISDRQVSMQVQEVICQAPPTWLNHAEELFLS
NLDFFKPIQREVRSDPEAVKQVARATNNLLDSLGSLAVELASMKSWIDLRNEIIFLTQNA
TSSPSTMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDEQAALYDNSST
PFCNSLVKNMDSNPMSRMIWQALKPLLMGKILYTPDTPATQRVIHEVNRTFQELGVFRDL
GGMWEEMRPKVWNFMENSEQMDVIRTLLKNNITARFFHAQLTDTDWTVADISNFLSKRRE
DTRLPGSAITWREVFNETDQAIMSISRFMECVNLDKLEPVSTEERLVSQSMVLLEDRKFW
AGIVFPDVDPNTTELPPNLSYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGF
TYLQDVIEHGIIRAMTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVA
IILKSVVYEKEARLKETMRIMGLNNGILWFSWFISSLIPLLISAGLLVLLLKKGNLLPYS
DPGVVFLFLGSFAVVTIMQCFLLSTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGF
GAKVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLEEDDFSLRTAITMMYLDSF
VYGVLTWYIEAVFPGQYGIPRPWYFPFTKSYWLGEKDTKSKNKVPLSRKGNPDVVCIEEE
PAHLELGVYIENLVKVYRHGKKLAIDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFP
PTSGTAYILGKDIRSELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYGRLKGLSEEQVKGE
IQQILKDTGLPHKRHSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIW
DLLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVK
KEPEPSLSSCRNSSSTVSFTKKEEECASVSSSDAGLGSEHESEAATIENGPAASICDVPF
VPPDVSLVSGLILCHVPAARLVEDLGHELTYILPYSAAKDGAFVELFKDLDLKLPDLGIS
SYGVSDTTLEEIFLKVAEDNGVDTDVPSDGTLPVRRRRRTHAFGGGDHQSCLRPLTEDDN
NENESDADAVSRETDWLNCSDGKGSYQVSGWGLKRQQFVALMWKRFLYARRSRKGFFAQI
VLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPADSNMQQLLNALLDP
PGFGTRCMDGFPIPEAPCTMGDEDWRTPDVPESVQQLFSSSNWTMEDPSPACVCSCDGKK
KMLPDCPAGAGGLPPPEMKLSATDTLQNLTGRNISDYLVKTYAEIIGKSLKNKVWVNEFR
YGGFSLGARSTQVLPPANEIDDAIERVRKIFELQKGAAADRFLDSLSGFINGLDTKNNVK
IWFNNKGWHSIGAFINVMNNGILRANLPEGRDASQYGIRAFNHPLNLTKEQLSQVALVTT
SVDVLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPLLYWVANFIWDMCNYI
VPATLVVIIFICFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLT
SVNILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADA
LERFGENRFRSPLEWDMVGKNLFAMAVEGVVFFVITILIQYRFFIKPRSVSKLTKLGALG
EEDEDVARERQRIVHGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNG
AGKTTTFKMLTGDTLVTSGEAFLAGKSILREIDQVHQNMGYCPQFDSINELLTGREHLEL
YAVLRGVPEKEVCDVAEWGIRKLGLVKYADKAAGSYSGGNMRKLSTAMSLIGAPPVVFLD
EPTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQ
HLKNRFGDGYTIILRVAGHNPDLLPVMKFIESELSGSMLKEKHRNMLQYQLPSSLTSLAH
IFSILAKNKDMLRIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDNSVRRRDVAIDVPTLSS
RGAAEEEGSVRESVM
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctccacacagcttggcctgttgctgtggaagaacttcacctacagacgacga
cagacgcttcagctactggtcgagatcatctggccgctgctgatcttcttcatcctcatc
gctgtgcggctgaactaccctccctacgagcagcatgagtgtcatttccccaacaaggcg
atgccatcagctggcacgctgccgtggcttcaaggaatcctctgcaacgctaacaacccc
tgcttcagacacccgacgccgggcgagtctccgggcgttgtcggcaacttcaacgactcc
ataatctctcgtctgttttcggacgccaagaagattcttctgtacagtcagaatgacaag
aacctggatggattcaaggagctggctcaggctttacaggcgctgcagaacagccaatca
ggcttccagcttagacatttcctgcaggacgaggagacggtgtctgacttcctgcggagt
aacgcttcattctctgagcatgatgttcagcagatcagagacgccgacatcaacctggag
aaggtgctcctgagggggtttggggtccacctgagggacatgtgtccccgcaggggcagt
ggacggagcctggaggactttgtgatgatttctgaccgacaggtgtcgatgcaggtacag
gaagtgatctgtcaggccccgcccacttggctgaaccacgctgaggagctcttcctgagc
aacctggacttcttcaaacccatccagagggaagtccggtccgaccccgaggccgtcaaa
caggttgccagggcgaccaacaacctcctggacagcctgggttcacttgcagtcgagttg
gccagtatgaagagctggattgacctgaggaacgagatcatcttcctgacacagaacgcc
acgtcgtcacccagcaccatgtaccaggcagtgtccaggattgtgtgtggtcatcctgaa
gggggcggactgcagatcaaatccctgaactggtacgaggacagcaactacaaggcactg
tttggaaaccataacagcagcgaggacgaacaggcagcgctctacgacaactcgtccact
ccattctgtaacagtctggtgaagaacatggactccaacccgatgtccaggatgatctgg
caggctctgaagcctctgctaatggggaagatcctgtacacccccgacactcccgccacg
cagagggtcatccatgaggtgaaccggaccttccaggagcttggtgtgttcagggacctg
ggtggtatgtgggaggagatgagacccaaagtctggaacttcatggagaacagcgagcag
atggacgtgatcaggacgctgctgaagaacaacatcaccgccagattcttccatgctcag
ctgaccgacaccgactggaccgtggccgacatctctaacttcctgtccaagcggagggag
gacacccggctgccgggtagcgccatcacctggagggaagtgttcaacgagacggaccag
gccatcatgagtatctcccgcttcatggagtgtgtgaacctggacaaactggagccggtc
tccactgaggagagactggtgagccagtccatggtgctgctggaggacaggaagttctgg
gcggggatcgtgtttccggatgttgaccccaacaccactgagctgccgccaaacctcagc
tacaagatccgcatggacatcgacaacgtggagcggaccaataagatcaaagacgcgtac
tgggatccgggtcctcgtgccgacccatttgaggacatgcggtacatctggggcggattc
acgtacctgcaggacgtgattgaacatggcatcatcagagcgatgacaggaacaaaggag
aaaacaggcgtgtacatccagcagatgccttacccgtgctacgtagacgacattttcctg
cgtgtgatgagccgctccatgcctctcttcatgactctggcctggatgtactctgtggcg
atcatcctgaagagtgtggtgtacgagaaggaggcgcggctgaaggagaccatgaggatt
atgggattgaataacggcatcttgtggttcagctggttcatcagcagcctgattcctttg
ctgatcagtgccgggctgctggttctactgctcaagaaggggaacctgctgccctacagc
gaccccggcgtggtcttcctcttcctgggctccttcgctgtggtaaccatcatgcagtgt
ttcctgctcagcacggcgtttgcccgcgctaacctggccgctgcctgtggaggaatcatc
tacttcaccctctacctgccctacgtgctctgcgttgcctggcaggactacatcggcttt
ggggccaaagtctttgctagcctcctgtctccggtggcattcgggtttggctgtgagtac
tttgctctgttcgaggagcagggtgtcgggatccagtggaagaacctggtgtccagtcct
ctggaagaggacgacttcagcctccgcaccgccatcaccatgatgtacctggactccttt
gtgtacggagtcctcacctggtacatcgaggccgtgtttccaggtcaatacggcatcccg
cggccctggtacttccccttcaccaagtcctactggctcggagagaaagacacaaagtcc
aaaaacaaagtccctctgagccgcaaaggaaaccctgacgtggtgtgtatcgaggaggag
ccggctcacctggagctaggcgtctacatcgagaacctggtgaaggtttatcgtcacggg
aagaagctggcaatagatggactgacgctcggcttctacgagggacaaatcacgtccttc
ctcggacacaacggagccggaaaaaccaccaccatgtccatcctgacaggtctcttccct
cccacctcggggacggcctacatcctgggcaaagacatccggtctgagctgagtgccatc
agacagagtctgggcgtctgtcctcagcacaacgtcctcttcagcatgctgacggtggag
gagcacatctggttctatggccggctcaaaggcctgtcggaggagcaagtgaaaggtgag
atccagcaaatcctgaaggacactgggctgccgcacaaacggcactcaaggaccagcacc
ctgtctggcggcatgcagaggaaactatctgtggctctggccttcgtcgggggatcaaag
gtcgtgatcctggacgagcccaccgccggcgtcgacccatatgcccgcagagggatctgg
gacctgctgctgaagtaccgacagggtcggaccatcatcctgtccacgcaccacatggac
gaggcggacatcctgggagaccgcattgccatcatctcccacgggaagctgtgctgtgtg
ggttcatctctgtacctgaagaaccagctggggacgggctactacctgacgctggtcaag
aaagaaccagagccgtcactcagctcctgcaggaactcgtccagcactgtgtccttcacc
aagaaggaggaggagtgcgcctcggtcagcagcagtgatgccggcctcggcagcgaacat
gaaagtgaggctgcgaccattgagaacggccctgccgcatccatctgtgacgtccccttt
gtcccgcccgacgtgtcactggtgtcgggtctgatcctgtgtcacgtccctgccgcccgc
ctggtggaggatctgggtcacgagctgacctacatcctgccgtacagcgccgccaaggac
ggagccttcgtggagctcttcaaagacctggacctgaagctgcccgaccttggcatctcc
agctatggcgtgtcggacaccacgctggaggagattttcctgaaagtggctgaagataat
ggagttgacaccgatgttccctcagatggtacacttcctgttcggaggcgaaggaggact
catgctttcggaggaggagatcatcagagctgtctgaggccgttgacagaggacgacaac
aacgagaacgagtctgatgcagacgcagtgagcagggagacggactggctgaactgctcc
gatggtaaaggttcctaccaggtgagcggttggggtctgaagcggcagcagtttgtggct
ctgatgtggaaacgatttctgtacgctcggcgctccaggaagggcttctttgctcagatc
gttctccccgctgtgtttgtgtgcatcgctctggtcttcagcctcatcgtccccccgttt
ggaaaatatcccagtctggagctgcagccctggatgtatgaggaccaggtcaccttcatc
agtgatgacgctcctgcagattccaacatgcagcagttattgaatgctctgttggaccct
ccgggttttgggactcgctgcatggacggatttcccatcccagaagctccctgtactatg
ggcgatgaggactggaggactccagacgtcccagagagcgttcagcagctcttcagctcc
tctaactggaccatggaggacccgtctcctgcctgcgtctgcagctgcgatgggaagaag
aagatgctgccagactgtcctgctggagctggaggactgccaccacctgagatgaagctg
agcgccaccgacactctgcagaacctgacaggaagaaatatctcagactatctggtgaaa
acctacgctgagatcattggcaagagtttgaagaacaaagtgtgggtgaatgaattcagg
tatggaggcttctcattgggcgccaggagcactcaggtcctcccacccgccaatgagatc
gatgacgccatcgagagagtccgaaagatctttgagttacagaagggagctgcagctgat
cggtttctggatagtttgtctggtttcatcaacggtttggacacaaagaacaacgtgaag
atctggtttaataacaaaggctggcacagtattggagcgtttatcaacgtgatgaataac
ggcatcctgagagcaaacttacctgagggacgggacgccagccagtacggcatcagagcc
ttcaaccaccctctgaacctgaccaaggagcagctgtcacaggtcgcactggtgacaacc
tctgtggatgtcctggtgtccatctgtgtgatcttcgccatgtccttcgtcccggcaagt
ttcgtggtcttcctcatccaggagcgcgtcaataaagccaaacacatgcagttcatcagt
ggagtgcagccactgctctactgggtggccaacttcatctgggacatgtgtaactacatt
gtccctgctacgctggttgtcatcatcttcatctgtttccaacaaaaagcctacgtgtcg
tccaccaacctgccagtgctcgccctgctgctgctgctctacggctggtccatcactcct
ttgatgtacccggcctccttcttctttaagatccccagcacggcgtacgtcgtcctcacc
agcgtcaacatcctcatcggcatcaacggcagcatctccacttttgtcatggagctgttt
ggaaacaatgaaatcggaggaatcaacgatatcttgaagaacgtccttctcatcttccct
cacttctgtcttggtcgaggtctcatcgacatggtgaagaatcaggcaatggccgacgcc
ctcgaaagatttggtgagaacaggttccgctctcctctggagtgggacatggtgggtaaa
aacctgtttgcgatggctgtggagggcgttgtcttcttcgtcatcaccatcctcatccag
tacagattcttcatcaaacccaggtctgtgagtaaactcactaaactgggagctctgggt
gaggaggatgaggacgttgcccgagagaggcagaggatcgtccatggcctcggacacgga
gacatcctggagctgagacagctcaccaaggtgtttaagaggaagcagaagccggcagtg
gatcgactgtgtgtggggattccacctggagagtgtttcgggctgctcggagtgaatgga
gcaggaaagacaacaacctttaagatgctgacaggagacactctggtgaccagtggagag
gccttcctggctgggaagagcatcctgagagagattgatcaggtccatcagaacatgggt
tattgtcctcagtttgactccatcaacgagctgctgacaggcagagaacacctggagctg
tacgctgtcctcagaggagtcccagagaaggaagtgtgtgatgttgcagagtggggcatc
aggaagttgggcctggtgaagtacgctgacaaagcagcaggaagttacagcggaggaaac
atgaggaagctgtccacagccatgtctctgattggagctccacctgtcgtcttcctggac
gagcccacgactggcatggaccccaaagctcgccgcgccctctggaactgcatacacagc
gtcattaaagagggacgctccgtcgtcctcacctcacacagtatggaggagtgtgaggct
ctgtgcaccaggatggccatcatggtgaatggcaggttcagatgtctcggcagcgtccag
cacctgaagaacaggtttggtgacgggtacaccatcatcctgcgggtggcgggacacaat
cccgacctgctgcccgtcatgaagttcatcgagagcgagctgagcggcagcatgctgaag
gagaaacacaggaacatgctgcagtaccagcttccatcatcacttacctccctcgcacac
atcttttccatcctcgccaaaaataaagacatgctcaggatcgaagactactccgtcact
cagaccactctggaccaggtgtttgtgaactttgcaaaggaccagagtgatgactatcac
tccaaagacaactcggtgagacggagagacgtcgccattgatgttcccacgctgagctcg
agaggagcggcggaggaggaggggtctgtgagggagagcgtcatgtga
DBGET
integrated database retrieval system
