Acanthopagrus latus (yellowfin seabream): 119007437
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Entry
119007437 CDS
T08233
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119007437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119007437
Membrane trafficking [BR:
alat04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119007437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
119007437
NCBI-ProteinID:
XP_036933016
LinkDB
All DBs
Position
18:complement(27399975..27416525)
Genome browser
AA seq
1506 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTIIQVGKDKYTTGLVEKAEV
PEWNEECCFELLPGILEDGGRGAFPHGSGDLVLTVMHRVLIGLDVFLGQTIIPLDKIFQE
GMCPRDEWFKLNSKAGRKEKERGELQVTVQFTRNNMTASMFDLTMKDKPRSAFGKLKDRV
TGRKRGDVESSSAIVPGRYAALSGSQGFGEEGGVMVEPPDVEVVEEKRSKMKDFFKGRLR
KSSDTRSCSSLASESSVSSENTGPPPSLDLLSDPPSSPIYTSKVRVDTHYGEADLAKKVL
TSQHTTKVLTHKRAFSDEASKITTAFPRPNPAVESLKGSTMTQSKSSLCINGSHVYESEP
STPKSSAAHPSKLVLLEKCSPLSRSLQNLTKRGEDKGSFAEGRRWSFDKTKKEEKEGQKE
AQASSSTAQQAQTGGQPVQAVMPGAVSGAGSPDKGRKLRMTLFSGGRSDSLPAKSDLNQA
APTSEGRLKGWFGSGDSQNKPRLEISPKVESSSDVPPPLPPRSPVAPQCSSPSALPSGHV
SPGDCNHTNPFTPSPSPASTPLSPSNPFSSQHNPFLEELVAEESQTSPPVAPCSSSSSSP
FHYTTLPSQPCAPSTAHDVYASNTASIKRERPRPVARQVSLPAILPKAARPNSPNHSAPC
SASGCVGEWDDWFDAFASSRLNSPKGSLPHKQPRTSPNSSQRYSYPPVNHAQELQTCEEE
PPPLPPRRLVRTPVNEIYSDGWLHRGQELAVHKEAYLLSQTGVASLQRGREGESKRNSIS
PDPHTSSEISDSLSVNSQPYTNVTSPGFISEEKLKKFKYEPLEDDTDCWGGMLFEQDLYG
RACRGNYGQPRVNSHRSENSVNKITSVNSGPKMVLEREISVAELLNLPSKTSVTSSSKPD
AKVQDMLNDEGLSGNKITSMNSEPKMVLNSETSAADLMNFSSTTSTTTSSSKPDATVPEI
TTTPEEETEFDPPDTPGINNNVSFSLTLGDLNMNVNNSDFSFIDSDGSSQSEVVDTLKGI
SSFGGTFPQTSEASVIAGYHSEAVTSPQGMFTLKDTYIPEMNSSFEITASSNKLCKVSPV
CHDNCRTQDCRCDLNNSRVTRREMAALSPQSGTSVPLDLESKADLTRSVGDFKKTIDDNG
NPEGKIVPLDQKESFSGVVSARFRPKGVSRQNSSGSPHHQSRSGDFGEFEQLLSLVQNIS
RVSEGPLSYQPTKSALSTLMAFNKQADLQGDNTNKEEANCNESNSLRKSRLTEKCISFED
LHAKVAPYSRTLSESKIGQSLQEPEPSSPSIPCAPSLSADAQSTLHPSPFCCPSLHPSSM
GPSVGASTTLAVAPYTSSFSYSTTSTTDQPLVDARHSLLPEETQPASNLPRQESRPHPVK
PLTSSQSEKKEGRSVLEKLKSSIHPGRTAQQVAAEPERSQEPAVDRSAQYQHLTNMELIS
LLLQQEMDMQKQQAASEQQEAQLYKCEAELRKVKLQVRDLEDYIDNLLLRIMEQTPTLLQ
VRTRHK
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcactgatcgatctggacgatgatcagcggtgggtgcccacacatgtcaatgtc
accgtcctccgcgcgagaggactgcgcaccaagggcaagcacggcagccgctacctctac
accatcatccaggtggggaaggataagtacaccaccgggctggtggagaaggcggaggtg
cccgagtggaacgaggagtgctgcttcgagctgctccccgggatcctggaggacggcggc
cggggcgcgttcccccacgggagcggggacctggtcctcaccgtcatgcaccgggtcctc
atcggtctggacgtgttcctcggtcaaaccatcatcccgctcgataagatctttcaggag
ggaatgtgtccgagagatgaatggttcaagctcaactccaaggcggggagaaaggagaag
gagcgcggtgaacttcaggtgacggtccagttcactcgcaacaacatgacggccagcatg
ttcgacctcaccatgaaggacaaaccccgctctgctttcggcaagctgaaggatcgtgtg
acagggaggaagaggggggacgtggagtcgtcctccgccatcgtgccgggccgatacgcc
gccctgtcaggatcccaggggtttggcgaggagggcggagtgatggtggagccgccagat
gtggaggtggtggaggagaagaggagcaagatgaaagatttcttcaaaggaaggctgcgc
aagtcgtccgacaccaggtcgtgctcgtcgctggcgtcggagagcagcgtgtccagcgag
aacaccggacctccgcccagtctggacctgctgtccgaccctcccagctctcccatctac
acaagcaaagtgagagtggacacccattatggagaggctgacttagctaaaaaagtgctc
accagccagcacacaacaaaggtcctcacacacaagcgagccttcagcgacgaagctagc
aagatcacaacagccttccctcgtccaaatcctgcggtggagtctctcaagggttcgacc
atgactcagtccaagtcttccttgtgtataaatggaagccacgtctacgaatctgagccg
tccactccgaagagctccgcagcccatccgtccaaactggtcctgctggagaagtgttcc
ccgctgtcgcgctccctgcagaacctcaccaagagaggcgaggacaaaggttcctttgcc
gaaggccgacgctggtccttcgacaagacgaagaaagaggaaaaagagggtcaaaaagag
gctcaggcatcgtcttccacggctcaacaagctcagacaggaggtcaacccgtacaggca
gtgatgccaggcgccgtttcgggtgctggttcacctgacaaagggaggaagctaagaatg
acgttattctctggagggaggagtgattccctcccagctaagtcagacctgaaccaggcc
gctccgacatctgaggggaggctcaaaggctggttcggctccggtgactcccagaacaag
ccaaggctggaaatttctcctaaggtagaaagcagctcagatgtaccccctcccctccct
cctcgctcccctgtagcccctcagtgctcctcaccctctgccctcccctccggtcatgtc
tcacctggcgactgcaatcacaccaatcccttcaccccctctccttctcccgcctcgacc
cccctctccccttccaaccctttctcctcacaacacaacccctttcttgaggagctggta
gctgaggagtcgcagacgtcccctcctgttgcgccttgctcctcttctagctcatccccc
tttcattacactacccttccctcccagccctgcgcacccagcactgctcacgatgtgtac
gcttccaacacggcttccataaagcgtgagcggcccaggccggtagctagacaggtgtct
ctccctgcgatactacctaaagcagccaggcctaactccccgaaccattctgccccttgc
tctgcgtcagggtgcgtgggagaatgggatgactggttcgatgccttcgcctccagcagg
ctcaactcacccaaaggaagtcttcctcacaagcagccgaggacaagtccgaattcatct
cagcgatatagttaccctccggttaatcacgcacaagagctgcaaacatgtgaagaagag
cctccacctttacccccaaggagacttgtaagaactccggtgaacgagatttactctgac
ggctggctgcacagaggtcaagagctagctgtccacaaagaagcctacctcctctcacag
accggcgtggcctccttacaacgcggcagagaaggagaaagcaaaagaaacagtatatcc
ccagaccctcacacgagcagcgagatatcggactccctcagcgtgaactcccaaccctac
acaaatgtcacttcgccaggattcatctctgaagaaaagctgaaaaagttcaaatatgaa
cctttagaagatgacaccgactgctggggagggatgttgttcgagcaagacttgtatgga
cgtgcatgtagaggaaactatggacaacccagagtgaacagccatcgctctgaaaactct
gtaaataagatcacatctgtgaactcaggacctaaaatggttcttgagagggagatatct
gttgcagaacttttgaacttgccatctaagacttctgttactagttcctcgaagccggat
gcaaaggtacaagatatgctgaacgacgaaggactttctggcaataagatcacgtccatg
aactcagaaccaaaaatggttctcaacagtgagacatctgctgcagacctcatgaacttt
tcatccactacttctactaccacttcttcctcaaagccagacgcaacggtaccagaaatt
acaaccactccagaggaggagacggagtttgatccgcctgacaccccaggcatcaacaat
aacgtctctttctccttaactttaggagatctgaacatgaacgtgaataattcagatttt
agttttatcgactctgatggctcttcccagtctgaggtagttgatactctcaaaggcatc
agcagctttggtggcactttcccacaaacgtcagaagcctcagtgatcgccggttaccat
tcggaggccgtgacctcacctcagggaatgttcacgttgaaggacacctacatacctgag
atgaactcttcctttgagataactgcgtcatcgaataaactgtgcaaagtctctccggtg
tgccacgacaactgccggacacaagattgtcgatgtgatctgaataactccagggtaacc
agaagagagatggccgccttgtcaccacagagtggaacatctgttcctcttgatcttgaa
tccaaagcagatttaaccagaagtgtgggtgatttcaaaaagacgattgatgataatgga
aatccagagggtaaaatagtcccgctcgaccagaaggagtcattttcgggtgtggttagt
gctcgttttagacccaaaggagtgtcccgacagaacagcagtggcagcccacaccaccaa
agcagaagtggagacttcggagagtttgagcagctgttgtccctcgttcaaaatatctca
cgtgtcagtgaaggaccactgtcataccagcccactaaatcagctctttccaccttaatg
gcttttaataaacaggcagatttgcaaggagacaacaccaacaaagaagaagcaaattgc
aatgagtctaattcactgcggaagtctcggcttacggagaaatgcatcagtttcgaagac
ctccacgccaaagtagcaccctactcgagaactctctcagagtcaaagattgggcaatct
ttgcaagagcctgaaccctcttctccctccatcccttgtgcaccctccctgtcagctgat
gcacaatctacactccacccttcccctttctgttgcccctccttacatccctcaagcatg
gggcccagtgtcggagccagcactacgctggccgtggccccctacacctcctccttctcc
tactctaccacctccaccactgaccagcccctggtcgatgcacggcactcacttttgcct
gaggagacacaaccagctagcaacctgccccgtcaggagagcagacctcatccagtgaag
ccattaacctccagccaatcagagaagaaggagggccgttcagttctggagaagttgaag
tcttccatccacccgggacgcaccgcccagcaggtcgcagccgagcctgagaggagtcag
gagccggcagtggaccgctcggctcagtaccagcacctgaccaacatggagctgatctcc
ctgctgctgcagcaggagatggacatgcagaagcagcaggccgcctccgagcagcaggag
gcgcagctgtacaaatgcgaggccgagctgagaaaggtcaagttacaggtcagagacctg
gaggactacatcgataatctcttgctgcggatcatggagcagacgcccacgctgctgcaa
gtgcgcactcgacacaagtga
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integrated database retrieval system
