Acanthopagrus latus (yellowfin seabream): 119007580
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Entry
119007580 CDS
T08233
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119007580 (sh3tc2)
Membrane trafficking [BR:
alat04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119007580 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_1
TPR_2
SH3_2
SH3_9
SH3_1
TPR_MalT
TPR_10
TPR_7
SNAP
Motif
Other DBs
NCBI-GeneID:
119007580
NCBI-ProteinID:
XP_036933240
LinkDB
All DBs
Position
18:15287791..15308781
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AA seq
1584 aa
AA seq
DB search
MALICGSCRLLGQMASCCCRPLLNSSCCGPFIKVCLSSFTDISPAELDALWREPPYTLGG
ANEHFSGHDIMTQGAGEEEGGPAVESGEGGVEPDSYWKKKEAFLRGSTVSLGDKFSSEIV
LLFTGRRRSSADPDRALQEALRTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDSFVLTF
KTVEEIWKFSTYLALGYVARCLENFLCDQSFWLDPELLSDLQINVTVDEEHLATLYLGLV
LQEGSFFAKALFTRSEEDEDDEEQLSFKKNDLLMVRDTGQDDTWEGTLLSTGNHGQVPVN
AMQPLPYPFYQWFLRKYPGNAGCSPTEKEAFEHSIVTGSCVAVADYSPVGPDELQLRQGD
VVGIQGLLVRGLGVFVGKHASTGHTGFVHKAHVKPLDAEPLDGQLVFLTEEERASLAQVN
PGSSEPSDSGLLERLFSSDISSVYRLDRLDESDFMYIRSRPKHDHNVPGSTRQSAVSERS
GGTPPYHSSPRSSLSHSHPRLSLYHSHNPLPQEGERLSFTLDDTFRELDEFQEDPPLFLE
ENSWEGEDPERSDPTLTLLNCQHFQEDFLPLYDLQYSFLWVTFSGKTEDELPGHLESVRE
CAKRMGMHWAHRRACFLLGRLCARRLKFSQARVYYEEALSVQVDSFSDTPLLVALFTNLT
AVYLKQRMTDKLPQTLEKAGALLLCLPCHAFTSTDEVELLNLLLRRSVVMGDKHLEARVC
YLTSSLFLQLKKTDDALPFVERLQFLSATLSATDGHPIAPVDLNWLLSWLYHRKYMPYLA
LASLSLDTRQDHSLSDAFQRIGLFIKNSVRLNPRWKEGTSLLPAQIVVYLQQALAVAERG
EDIKTQRDLCQGLASVYQQYNALDNAVRCAQQAVETGGHINEEEGFEASVLLGWLLVLTG
QAERAQSILQPLLTSLQGTDSPTQRGVIHNLLALCLRRQDRIPEAGWHLHSALVISRESG
NQRNQALALANLGCLALDAGASLMAERFLVRSLRLFLELWESPTDEEHVQTYLWLGRSYK
DRGRRQDSRACFEMGLLIALHARNLHSQMVVAKVLSRLYADMLLYGQSIVYNEHCVSVSR
ELKDKRLEGEHLEILSSLYLSLNTEKSSRKSLDYTKQSLRISIDLGKREEESETWLQVGR
IYYLVQEDELADMYLQAAVKTALRMNDAHFAMSIYEEAGDVYFKGHRNRMASLPFYRDGS
LPFARSIKDIHSEFRLLSKLTELLMKQGEQEEALQYATLAVQIASKTGVLANERTAYHRL
ATVYYSLQQYEMAENYYLKSLSLCPPVMQHPREARYYTKIYCRLGNLTLHKLKDAFDAVG
YFHLALAAALEDRANPEALYVVYMKLAEIHGNHMPDAQLCQVYRDRAQTLKRVLAGEDGN
VDDGDTGPGHKTEKDSNVERAEIAVRRNGVLTSTPDNNNSFPRTCVMRGDTEDARRDANT
GDSNGRESHSTSPPDADGPFVDAETDFITSRSYSESIFTESFDTAKEQISDSSSSTDTLQ
THHNQTGGGDCDTARSRAPAHINHASEITRHAGAPNTDSEIRDEENSLSKETDAPADQSD
ADQSDTVSMSTDKAEHMDLDDVYT
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctgtgggagctgccggctcctgggccagatggcgtcttgttgctgcaga
ccgctgctcaactcctcctgctgtggaccgttcatcaaagtgtgcctctcctccttcaca
gacatctctcctgctgagctggatgctctctggagggaaccaccgtatacccttggtggt
gcgaacgagcacttctccggacatgacatcatgactcaaggcgcaggtgaggaggagggc
ggtccggcggtggagtcgggtgaaggaggggtggagcccgacagctactggaagaagaag
gaggccttcctcagaggaagcaccgtgtcgctgggagacaagttctcctcagaaattgtg
ctgctgttcacggggcggaggcgctccagtgcggatcctgaccgggccctgcaggaggcg
ctgcgcacccggctcagagtggtggagagcaacagccaggacgtcatccagctctttaaa
gacttgtctgcgcgcctggtgtctgtccacgctgagaaggacagcttcgtgctcacattc
aagactgtggaggaaatctggaagttttcaacctatctagcattaggttacgtggctcgc
tgcctggagaacttcctgtgtgatcagtccttctggctggacccagagctgctcagcgac
ctgcagatcaatgtgaccgtggatgaggaacatctggcaaccctttacctgggactcgta
ctacaggaggggtccttcttcgctaaggcgctgttcacaaggagtgaggaggatgaagac
gatgaagaacagctgtccttcaagaagaacgacctgctgatggtgagggacacggggcag
gacgacacgtgggagggcaccctgctgtccaccggaaaccacggccaggtgccggtcaac
gccatgcagccgctgccttaccccttctatcagtggttcctgaggaagtacccgggcaac
gctggatgctcgccaacagaaaaggaagcattcgaacactcgatcgtgacgggttcctgt
gtagcagtggccgactacagtccagtgggcccagatgagcttcagctgagacaaggcgat
gttgtggggatccagggtctgctggtccgaggcctgggcgtgttcgtaggaaaacacgcc
tccacagggcacactggtttcgttcacaaggcccatgtcaaacctctggacgctgaacct
ctagacggacaattggtctttctgactgaggaggagagggccagcctggctcaggttaac
ccgggcagctctgagccgagtgacagtggcctgctggagagactcttctcgtctgacatc
agctccgtgtacaggctagatagactggacgagagtgacttcatgtacatcaggagtcgg
ccaaaacacgatcacaacgtccccgggagcacccgccagagcgccgtgtcagagaggagc
ggagggacgcccccgtaccactcctctccacgctcctctctctcccactcccatcctcgc
ctgtccctctaccactcccacaatcctctgcctcaggagggagagcgcctgtccttcacg
ctggatgacacattcagagagctggacgagttccaggaagaccctcccctcttcttggag
gagaacagctgggagggggaggacccggagcgcagtgaccccacactgaccctgctcaac
tgccaacacttccaggaggacttcctgcctctgtacgacctgcagtattccttcctgtgg
gtgaccttcagtggtaagactgaggatgagctaccggggcacctggagagtgtcagggag
tgtgccaagaggatgggcatgcactgggcacatcgacgggcctgcttcctcctgggaaga
ctctgcgcccggaggctgaagttctcccaggctcgggtgtactacgaggaggctctgagt
gttcaggtggacagtttctctgacacgccgctcctcgtcgctctcttcaccaacctcacc
gctgtctacctgaagcagcgtatgacggacaaactgcctcagactctggagaaggccggc
gctctgctcctctgcctcccttgccacgccttcacctccacggacgaggtcgaactgctg
aatctgctcctgaggagatcggtggtgatgggggacaagcacctggaggctcgcgtctgc
tacctcacctccagcctcttcctgcagctcaagaagacggacgatgcccttccgtttgtt
gagcgactccagttcctctcggcgaccctctctgccaccgacgggcatcctatagctccc
gtggacctcaactggctcctgagctggctctatcatcgtaaatacatgccgtacttggcg
ctggcctctctgagcctggacacgagacaagaccactcccttagcgatgctttccagagg
atcgggctgtttatcaagaactctgttcgcctcaacccacgctggaaggaaggaacctcc
ctgctccctgcacagattgtggtttaccttcagcaggccctggctgtcgccgagcgaggg
gaggacataaagacccagagggacctgtgccagggcttggcctctgtctaccagcagtac
aacgccctggataatgcagtgcgctgtgctcagcaagctgtggagacggggggccacatc
aatgaggaggagggcttcgaggcctccgtgctgctcgggtggctgctggtgttgacgggc
caggctgagagggcccagagcatcctacagccactgctcacatcactccagggcacagac
agtcccacgcagcgaggagtgatccacaacctcttggctttgtgtctgaggcggcaggat
cgcatcccagaggcaggctggcacctccattccgccctggtgatctccagggaaagtgga
aaccagaggaaccaggccctggcactggccaacctgggctgcctggcactggatgcggga
gcgtctctgatggcggagcgcttcctggtcagatccctccgtcttttcctggagctgtgg
gaaagccccacggacgaggagcacgttcagacctacctctggctggggcggagctacaaa
gacagggggcggaggcaggacagcagggcgtgcttcgaaatggggctacttattgcacta
catgccagaaacctacacagtcagatggtggtggccaaagtgctgagtcggctgtacgct
gacatgctgctgtacggccagagcatcgtctacaatgagcactgtgtgtccgtatccaga
gagctgaaggacaagaggctggagggagagcatctggaaatcctcagcagcctctacctc
tcactcaacactgaaaaatcgtctcgtaaatctctggactatacgaagcagagcctgagg
atttctatcgatctgggcaagagggaggaggagtcggagacctggctgcaggtgggacgc
atctattacctggtccaggaggacgagctggctgacatgtacctgcaggcagcagtgaag
acagccctgaggatgaatgacgctcactttgccatgagcatctacgaggaggcaggagac
gtctacttcaagggccacaggaaccggatggcctccctgcctttctacagggacggcagt
ctgccatttgcacggagcatcaaggacatccactcagagttccgtttgctgagtaaactg
acggagctgctgatgaagcagggcgagcaggaggaggcgctgcagtacgccacgctggcc
gtccagatcgccagcaaaacaggcgtgcttgcaaacgagaggacagcctaccaccggctg
gctacagtctactacagcctgcagcagtatgagatggcggaaaactactacctcaagtcc
ctgtcgctctgtccgcccgtcatgcagcaccccagggaggctcgatactacaccaagatc
tactgcagactgggcaatctcacgctgcacaaactgaaggacgcctttgatgcagtgggc
tacttccacttagctctggcggcagccctggaggaccgagccaaccccgaggccctgtac
gtggtgtacatgaagctggccgagatccacggcaaccacatgcccgacgctcagctgtgc
caagtttacagagacagagcccagactctgaagagagttctggctggagaggacggaaac
gtggacgatggagacacggggcccggccacaagacggaaaaggactccaatgtggagcgt
gcagaaatcgcggtgaggagaaatggtgttctcacttccacacctgacaataacaactca
tttccaagaacttgtgtaatgcgtggagacacagaggacgcgcgcagagacgctaacact
ggagattcgaatgggagagaaagtcacagcacgagtcctcctgacgccgacggccctttt
gtggacgccgagacggatttcatcaccagtcggtcgtacagcgagagcatctttacagag
tccttcgacacggcgaaggagcagatctcagactccagcagctccacggacactttacag
acccaccacaatcaaacaggcgggggagactgtgataccgcccgcagcagagcgcccgct
catattaatcacgcgagtgagatcacgagacacgcaggcgctccaaacacagattctgaa
atccgggacgaagaaaacagcctctctaaggaaacggacgctccggctgatcagtccgac
gctgaccaatcagacactgttagcatgagcactgacaaagcagaacacatggacctggat
gacgtctacacatag
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