Acanthopagrus latus (yellowfin seabream): 119007589
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Entry
119007589 CDS
T08233
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119007589 (ssrp1a)
03036 Chromosome and associated proteins [BR:
alat03036
]
119007589 (ssrp1a)
Transcription factors [BR:
alat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
119007589 (ssrp1a)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
119007589 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
119007589
NCBI-ProteinID:
XP_036933255
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All DBs
Position
18:21604029..21616950
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AA seq
708 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPASELNLAQWRRVCLGH
GIKLGTSSGHVYKYDGFRDTDFEKISEFFKTNYKLELAEKDMCVKGWNWGTAKFSGPLLS
FDVNDNTAFEVPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQSDERQDPVE
AFAQSVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGNIDEYSDSDEDQHDAYLERMKAEGKIREEGNDSDESDAESD
ESFNPGEEDDDIAEEYDSNASASDSSEDGDDSEDDSAKKKKAKKPKPVKEKKERKPRKEK
KKKQKDTGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWD
AKAGEAKRDYDKAKKEYKESGGGSASVSKKESKKSGGKKDEKKRKSAGGDKDKDRGGNDS
FKSREFIETSESSSDSDHKSKSKRKKESDDDEEEEAMTTPASSEEESD
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgggggacacactggagttcaacgagatttaccaggaggtcaaaggatcctggaatgac
gggcggctgcgtttcagcaaacagaatgtggtttataagagcagcaagacggggaaggtg
gacagcatcccagctagtgagctcaacctggctcagtggagacgagtgtgtttaggtcac
ggcatcaagctgggcaccagctcaggacatgtctacaagtatgatggcttcagggacaca
gactttgagaagatctctgagtttttcaagactaactacaaattggagctggcagagaag
gacatgtgtgtgaagggatggaactggggaacagccaagttctcggggccactgttatcg
tttgatgtaaatgacaacacagcatttgaggtcccactgtccaacgtgtcccagtgtgcc
acagggaagaacgaagtcactctggagttccaccagaacgacgacactgaggtctcgctc
atggaggtccgattctacgtcccgcccagccagtccgatgaacgacaagaccctgttgag
gcgtttgctcagagcgtgttgtctaaggctgatgtgatccaggccacaggagatgctgtg
tgtatcttcaaagagctgcagtgtcttacgcccagaggaagatatgacatccgtatctac
ccgacattccttcacctccacggtaagaccttcgattacaagattccctacaccaccgtg
ctacgtctgttcctgctgccacacaaggaccagaggcagatgttttttgttatcagcctg
gatcctccgatcaagcagggtcaaacacgttatcacttcctcatattgctcttctccaag
gaggaggacatcagcctcactctcaacatgagcgaggaggatgtggagcgccgctttgag
ggcaagctcagtaaaaacatgtcaggctctctgtatgagatggtcagcagggtgatgaag
gcgctggttaaccgaaagatcactgtacctggaaacttccagggtcactctggagctcag
tgcatcacctgctcctacaaggcctcctcaggcctcctctaccctctggagaggggcttc
atttatgtccacaagccccccgtacacctgcgcttcgaggagatctcctgtgtgaacttc
gcccgaggcaccactacaacccggtcgtttgactttgagatcgagacaaagcagggaaat
cagtacaccttcagcagcattgagagagaagaatatggcaaactgtttgactttgtaaat
gccaagaagctcaacatcaagaacagagggttcaaagagaagaagggcatgaaaggtaac
attgacgagtacagcgactcagacgaagaccagcacgatgcctacctggagaggatgaag
gctgagggcaagatcagagaggaaggcaacgacagcgacgaatcagatgctgaaagtgat
gagtcgtttaatcccggagaagaagatgacgacattgcagaagagtacgacagtaatgcc
tctgcaagcgatagtagtgaagatggggacgatagtgaggatgacagcgcaaagaagaag
aaggcaaagaaacccaaaccggttaaggagaaaaaagaaaggaaaccacggaaagagaag
aagaagaagcagaaggacactggcggccccaagaggcccatgagtgcctacatgctgtgg
ctcaactcaagccgcgagcgcatcaagtctgagaacccgggaatctccatcacagagata
tccaagaaggccggagagatgtggagacaactgggcaaagacgagaaggaggagtgggac
gcgaaggctggagaggccaagagggattatgataaagcaaagaaggagtacaaagagagc
ggtggaggatcagcctccgtttccaagaaggagagtaaaaaatctggtggtaaaaaggat
gagaagaagaggaagtctgcagggggagacaaggacaaggatcggggcggcaacgacagc
ttcaagagtcgagagttcatcgagacgagcgagagttcatctgactcggaccacaagagc
aagtccaagaggaagaaggaatcagacgacgacgaggaggaagaggctatgaccacacct
gccagctcagaggaagagtctgactaa
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