Acanthopagrus latus (yellowfin seabream): 119007617
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Entry
119007617 CDS
T08233
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119007617 (si:ch211-114c17.1)
Spliceosome [BR:
alat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119007617 (si:ch211-114c17.1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
TPR_12
TPR_2
TPR_15
TPR_11
HrpB1_HrpK
TPR_MalT
DUF6565
TPR_21
Motif
Other DBs
NCBI-GeneID:
119007617
NCBI-ProteinID:
XP_036933302
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All DBs
Position
18:complement(23091549..23099432)
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AA seq
743 aa
AA seq
DB search
MDDVNATDSIMAAEGCEEMSGNGELEESSAMEASEVPASPPTEMVTMSEENGSAAEAHEV
HEAPEAPVDPHPENFSMPTAAEDEEGELPADFERLWKAAHDSPQDFTSWTDLLQYCEQES
HVTASRRALEAFLVRYPLCYGYWKKYADLERRAGYNDKAEEVCIQGLQVIPLSVDLWIHY
INLLLGTLDMNLPESPVRIRRVFEDAVQAAGLDFHSDRLWDLYIEWEKEQGNMKNATAVL
DRVLKVPTQLYNTHYDKFKEQLNSQEPKEILSLEEYEELRASCRQSQKAERAEQAQEEEE
ERPPGEEEPATPEGTDTEELMQKIREQVLLRRDKVYQDNEGEVRKRWHFEDAIKRPYFHV
KPLDRLQLRAWHSYLDWEIAQLSSDTEDSDQDPNQAATEGSEVTAQPQEAPEDAAVARDD
YRVRILFERCLIACALYEEFWTRYTQYLELQSVDEARAVFKRACEVHLTYKPNIHMHWAT
FEERHGDLTEARRVLEALEKTLPGLAVVRLRRAALERRAGQLDQSEALLREAVAESKEKP
TLHAFYSIKLARLLLKLGRNPSRARTVLQEALEISPDNDKLHMNLLELEVSGDPWASAEA
VQECVTRALAAPLTPDTKILFSQRGLQFAEDYSNSIQRVLSVYDEHQKLLQELGGTKRGA
ENGDEDPEKLSKSDDGSAVAVSATAPPTMPHVPITTPPPPVMGTDMSAQAGYGGYSNWYQ
QPQYGSYGYQNTWNYNQGYYPPS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgtaaacgcgacggattccatcatggcggcggaaggctgtgaggagatgagc
ggcaacggggagcttgaagagtcttcagcgatggaggcctctgaggttcctgcgtcgcct
ccgactgagatggtgacgatgtcagaagaaaacggcagtgctgctgaggcccatgaggtc
catgaggcccccgaagcccctgtagatccccaccctgagaacttctccatgcccacagcg
gcagaagacgaggagggagagctgcctgccgactttgagcgtctgtggaaggccgcccat
gacagtcctcaagatttcaccagctggactgacctgctgcagtactgcgagcaagagagt
catgtcacagcgtcccgcagagcgctcgaggccttcctcgtccgctacccgctgtgctac
ggctactggaagaaatatgccgatctggagcgccgcgccgggtacaacgacaaagcagag
gaggtgtgcatccagggtctgcaggtgattcctctgagtgtagatctgtggatccactac
atcaatctgctgctgggaacactggacatgaacctgcctgagtcgcctgtgcggattcgc
agagtgttcgaggatgcggttcaggctgcaggtctggacttccactcggaccggctttgg
gatctttatatcgagtgggagaaagagcaggggaacatgaagaacgcaacggccgtactg
gacagagtcctcaaagtgcccacccagctttataacacacactatgacaaattcaaggag
cagctcaacagccaagagcccaaagagattctctccctggaggagtacgaggagctgagg
gcgtcgtgccgtcagagtcaaaaggcggagcgtgccgaacaagcccaggaggaggaggag
gagaggccgccgggggaggaagagcccgccacacccgagggcacagacacagaggaactg
atgcagaagatcagggaacaggtgcttcttcgcagggacaaagtttaccaggacaacgag
ggagaagtccgcaagagatggcactttgaagacgctattaaacgtccgtacttccacgtt
aagccactcgaccgtctccagctgcgggcctggcactcctacctggactgggagatcgct
cagctgagcagcgacaccgaagactccgaccaagatccaaaccaggcagccacagagggg
tcggaggtcacagcacagcctcaggaagcaccagaggatgctgctgtcgcccgtgacgac
tacagggttcgaatcctcttcgagcgctgcctgatcgcctgcgctctgtacgaggagttc
tggaccaggtacactcagtacctggagctgcagagtgtggacgaggcgcgggcggttttc
aaacgagcctgtgaggtccacctgacgtacaaacccaacatccacatgcactgggccacc
ttcgaggagaggcacggtgacctaactgaggcccggcgagtcctggaggctctggagaaa
accctgccagggctggcagtggtccgtcttcgcagggcggctttagagagacgagcgggc
cagctagaccaatcagaggcgttgctgcgggaggcggtggctgaatccaaagagaagccc
acgctacacgccttctactccatcaaactggctcgcctgttgctgaaactgggcaggaac
ccgagcagagcccgcacggtgctgcaggaggcgctggagatcagtccggataacgataaa
ctgcatatgaacctgttggagctggaggtgtcgggggacccctgggcctcggctgaggcg
gtgcaggagtgtgtgacgcgagccctggcagctcccctcaccccagacaccaagatcctc
ttctcacagagaggcctgcagttcgccgaggactacagcaactctatccagagggtgctg
tctgtgtacgacgagcaccagaagctgctgcaggagctcggtggaacaaagagaggagca
gagaacggggacgaggacccggagaagctgagcaaaagcgacgacggctctgctgttgct
gtgtctgcaacagctccacccaccatgccacacgtccccatcaccacaccacctccacct
gtgatgggcacagacatgagcgcgcaggctggctacggaggatacagcaactggtaccag
caaccgcagtacggcagctacggctaccagaacacctggaactacaaccagggctactat
cctcccagctaa
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