Acanthopagrus latus (yellowfin seabream): 119007652
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Entry
119007652 CDS
T08233
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
alat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119007652 (syvn1)
04120 Ubiquitin mediated proteolysis
119007652 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119007652 (syvn1)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119007652 (syvn1)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119007652 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
119007652
NCBI-ProteinID:
XP_036933351
LinkDB
All DBs
Position
18:complement(12420172..12428927)
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AA seq
642 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHMRVLSLMGLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQSSDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGIFPFWGPFPAVPPPPAAAAAAAPGATDVPQGSTEATQAAGSS
QPTSSSADTAAAAAAAAAAAAPGSALPGFPFSFPPPPFPTAPWLPMPPPPPFMSSMPPPP
PSLSRLSEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLSPPRPEG
RTADASGTNNSASSPAAGSSTGSPSQENDSPSSEQVDGATVSSQPADSTSAASDTERQEM
MDEGAVVGEEDGEPNAAELRRRRLRKLETATTSSSSSPPPDN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagcagccttggtgactgccaccagtctagcactgactggggctgtggtggca
catgcttatctcctcaaacatcagttctacccgactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcctttgtgttggtgttcttgctgggaaagttc
atgaggaaggtcttttttggacagctaagggctgcagaaatggagcatctcattgagcgc
tcctggtatgcagtgaccgagacgtgcctggcattcactgtgttcagggatgacttctcc
ccccgcttcgtagccctcttcaccctcctgcttttccttaagtgcttccactggctggct
gaggaccgggtggactttatggagcggagtccaaacatatcatggctttttcacatgaga
gtattatctctcatgggacttctgggtgtcctggacttcctgtttgtcaaccatgcctgt
cacagcatcattacccgaggagcctcagtccagcttgtttttggatttgagtatgccatc
ctgctgaccatggtactgaccaccttcattaaataccttctgcataccattgacctgcag
agtgagaatccctgggacaacaaggctgtctatatgctctacaccgagctcttcacaggt
ttcatcaaagtgctcctgtacatcgccttcatgaccatcatgataaaggtccacaccttc
cccctgttcgccattcgccccatgtatctggctatgaggcaattcaagaaagctgtaaca
gacgctatcatgtctcggagagccatccgcaacatgaatacactatatcctgatgccact
cctgaagacctgcagtcctctgacaacgtctgcatcatctgtcgagaggaaatggtcacc
ggagccaagaaactgccttgtaatcacattttccactcaagctgcctgcgctcctggttc
cagaggcagcagacctgtcctacctgtcgcatggacgttctccgggcatcaaacaacaat
cagactccagccccagcccaggccccgccccctgctccagcagcccctgccaacgcacct
gcagccccacctgccaacgtggctccaggcatgttacctggatttcctccaggcatcttc
cccttctggggtcccttccctgcagtgccccctcctcctgctgctgcagcagctgcagct
cctggtgccactgatgttccacagggcagcacagaggctacacaagcagctggttccagc
cagcccacatcatcatctgcagacactgctgctgctgctgctgctgccgcggctgctgct
gctccaggatcagctctcccaggcttccccttctccttcccccctcctcccttccccact
gctccttggctgcccatgccaccacctcctcccttcatgtcatcaatgcctccccctcct
ccgtctctgtcccggctatcggaggaggagctgagggagctggaggcagagggccgacga
ggccttgaggcccggctccagtgtctgcagaacattcacaccctgctggacgctgccatg
ctcaacatccaccactacctcagcactgtggccacactcagtcctcctcggcctgagggc
agaactgcagatgccagcgggacgaacaactccgcctcatctcctgcagctggcagtagc
acgggcagtcccagccaggagaatgactctccaagctctgagcaggtggacggagccaca
gtctcctctcagccagctgactccacttcagctgcctcggacacggagagacaagaaatg
atggatgaaggagcggtggtgggagaggaggatggagagcccaatgctgctgagctgaga
cgccggcgccttcgtaagctagagacggcaacaacgtcatcatcatcttcaccccctcca
gacaactga
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