Acanthopagrus latus (yellowfin seabream): 119007752
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Entry
119007752 CDS
T08233
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin beta-15 isoform X1
KO
K16499
protocadherin delta 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119007752 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Protocadherins
119007752 (si:ch73-233f7.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
119007752
NCBI-ProteinID:
XP_036933531
EnsemblRapid:
ENSALTG00010024044
LinkDB
All DBs
Position
18:20283763..20290429
Genome browser
AA seq
1019 aa
AA seq
DB search
MDNRLSRGSWVPVTGLVICLLLCACVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVA
KLSARRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPGCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWSEFNLDITESAAPGSCFPLESAQDQDVGTNSLRSYQLSANEH
FILNIQTRNDGSKFAELVLDTPLDREQQKKHEMVLTAFDGGSPERSGTALITITVLDAND
NVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFNVDP
YTGEIRVKGVVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDAGENGNVDCQIPSNVPFQLHSSFKNYYTLVTSEFLDRET
VSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFSQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQILVQA
QDAGFPPLASNVTVNVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGYLVTKITALD
ADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRLVEKDATRQRLVILVKDNGQPPLS
ATVSIVLTVVDSVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISLIFLVAIIVLAAVKC
YKDRETISGYNLPPFACCCCGGFQPEPPPEVFKKSNLNLQISSAAKVPTNCMEVNGNSSL
SQSYCYKVCLTPESAKSDFMFLKPCSPGSTPRNNEAKSAENSWNAQSRSASVNNGATTPN
ELKQPNTDWTLTKNQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMTPGQYWTWGTHMR
GMKDYKMSPSTSGVPSRPWTPRCTPPPQQQQPSIPPHPHPHPHPPPHPHPHPHPHPPPDY
HHNVYIPGTPSGFCTLRPASQRSSELDVHNSFSTFGKKRRLQMSPQGEAAMINNDLYND
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggataacagactctccagaggcagctgggtaccggtgactgggctggttatatgtctg
cttctgtgtgcgtgtgtagtggacctggtccttgcgcaaattcggtactccatccccgag
gagctggagcacggagcttttgtgggcaacatcgccgaagacctgggcttggatgtggcc
aagctgtcagcccgtcggtttcgtatcgtctccggcgcaaagaagcagtatttagaagtg
aacttggagaatggcatcctcttcgtcaacgagaaaatagacagagaggagctgtgcgaa
cggagcccgggctgctttttacacttacaagtggtgattgaaaacccactagaactgtac
agagtggaagtggagattttagatgtgaatgacaactcgcccagtttcccgtggagcgag
tttaatcttgacatcacagagtcggcggcgcccggctcctgtttcccgttagagagcgca
caggaccaggacgtgggcaccaactccctgcgctcctaccagctgagcgcaaacgagcac
ttcatactgaatatccagacgcgcaacgatggaagcaagtttgctgagctcgtgttggac
accccgctggaccgggagcagcagaaaaagcacgaaatggttctgactgcctttgacggg
gggtcaccggaacgctccgggacggcgctgataactatcacagtgttagacgcgaacgat
aacgtgcccgtgtttgaccgctcagtttaccgggcgagcctggtggagaacgcgccgagg
gggacgctggtgctgaagctgaacgccacagacctggatgagggctccaacggggaggtg
acctacgcgtttagcgggcacgcacccctaaaggtgcgcgaactgttcaatgtggacccg
tacaccggtgaaatccgagtgaagggcgtcgtggactatgagaaagccagtgtgtatgag
ctgtatgtgcaggcgaaggaccggggaccctcagccgtggcagtgcacagcaaagtgctt
gtagacatcctggatgtgaatgacaacgcacccgaagtcatcctcacatcagtgtccact
cctgtgcaggaagacgcgccaccgggcacggtgatagctgttatcagcgtcatggaccgg
gacgcgggagagaacgggaacgtcgactgtcagatcccgagcaacgtccccttccagctc
cactcgtcttttaaaaactattacactctggtgacaagcgagttcctggacagggagacg
gtgtctgagtacaacatcaccctcacagccagagacctgggctctccttcgctctccacc
aggaaaaccatcctcgtccaagtgtctgacattaatgacaaccccccgcgcttctctcaa
ccttcatacacagtgtatgtgaccgagaataatgcccccggcgcttccatttgctctgta
actgcgttcgaccccgattctaaccagaacgcctatctgtcttattctattctcgagggt
cagattcagggcatgcccgtgtccacttatgtctcaatcaactctgacaacggcaatatc
tacgcactgcgctcctttgattatgagcaacttagaaactttcagattctggttcaagcg
caagacgccgggttcccccctctcgccagtaatgtcacagtcaacgtctttgtcttggac
cagaacgacaatgcacctgtgattgtgtccccgctgcctaaaaacggcacggtggccaca
gaggtggttccgcggtcagtggacgctgggtatctggttaccaaaataacagcgttagac
gcggacgcggggcagaactcccggctgtcctatcaggtgttgcaggctacagaccccggg
ctgttcagcgtggctctgtacacgggagagatccggactattcgccggctggtggaaaaa
gacgcaacaaggcagagactggtcatattagtcaaggacaacgggcagccgccgctctcc
gccaccgtctctattgtccttacagtggtagacagcgtgccggagtcgctgtcagatttc
ggagacctcactctcagcccacagcccccctccaacctcgctctctatttgatcgtgtca
ctgagcaccatatctttaatattcctggtggcaatcatcgtgctggctgcggtcaagtgc
tacaaggacagagagaccatcagcgggtacaacctccccccgttcgcctgctgctgctgt
gggggctttcagcccgagccgcccccggaggtgttcaaaaaatccaacctcaacctgcag
atctcgtccgccgccaaagtgcccacgaactgcatggaggtgaatggcaacagcagtctc
tcacagtcatattgttataaagtgtgcctgacccctgaatcagccaaaagtgactttatg
tttctgaagccgtgcagcccgggcagcacgccgaggaacaacgaggcgaagagcgcagaa
aactcgtggaacgcgcagagccggagcgcatctgtgaacaacggagcaactactcccaac
gagctgaagcagccgaacacagactggaccctcacaaagaatcagaactcctccattaaa
agttataactctatcaacatggacggcaccctcatgcgtaaggccatgcacgcagaccca
gaaaactatgtcacctccatgacacctggacagtactggacctgggggactcacatgaga
ggcatgaaagactataagatgtctccttcaaccagtggagtcccctctcgcccctggact
cctcgctgcacgcctcctccccaacagcagcagccatccatccccccgcaccctcaccca
cacccacaccctccccctcacccacacccacacccacacccacacccaccacctgactac
catcacaacgtatacatccctgggacaccatcgggcttctgcaccctgaggcccgcgtca
cagcgcagcagcgagctggacgtccacaattccttctccacctttggcaagaagcgccgt
cttcagatgtccccccagggggaggctgcgatgataaataatgacctgtacaatgactga
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