Acanthopagrus latus (yellowfin seabream): 119007803
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Entry
119007803 CDS
T08233
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03013
Nucleocytoplasmic transport
alat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119007803 (upf3b)
03015 mRNA surveillance pathway
119007803 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119007803 (upf3b)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119007803 (upf3b)
mRNA cycle factors
P-body specific factors
119007803 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
119007803
NCBI-ProteinID:
XP_036933610
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All DBs
Position
18:25630449..25634134
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AA seq
456 aa
AA seq
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MKEDKENTRPKERKVEIKCEDADKMERPKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EVDYLEFFSNDTSLYPHLFARAYINFRNQEDIVLFRDRFDGYVFIDNRGQEYPAVVEFAP
FQKTAKKRSKKKDAKCGTIVEDPEYKKFLENYNGDEEKLTSTPETLLEELEAKSKELVAK
KTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEERRKRKEADKMKRLEK
PLEKDKDQVKEEPKIKLLKKPDRGEDADSEKPKEKAKKPERPIKDDRSMSSSDHKRRPNI
ENKEDRGRKTDDHGRKEFRERDSDRDREREKERRQREKERLRRQDEERRRRRERQDGENS
YRKREVEGKKEKERAMEQKKGDHVGESSHSERPEKTAKDHKKEESAKRERLRNKDRPAIQ
LYQPGARSRNRGGGECNSADGKPDTEQEKVADKGED
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagacaaggaaaacactcggcccaaggagaggaaggtggaaataaaatgtgaa
gatgcagataaaatggagaggccgaaagagaagaaagaggccatgacaaagattgtgatc
agacgattaccaccaagtctgaccaaggaggagctggaggagcagttacagcctctccca
gaggtggactacctggagtttttctccaacgacaccagcctctatcctcacctcttcgcg
agggcttacataaacttcagaaaccaggaggatatagttctcttcagggatcgatttgat
ggatatgtgttcattgacaacagaggacaggagtatccagctgtggtggagtttgcacct
tttcaaaagactgccaagaaaagaagcaagaagaaggatgcaaaatgtggaaccattgtg
gaagatcctgaatacaagaagttccttgaaaattacaatggggatgaagagaagttgaca
tcaacacccgagactctgttggaagagcttgaggccaaatcaaaggaacttgtagctaag
aaaacaactcctctattggacttcctgaagaacaaacagagaatcagggaggaaaagaaa
gaagagagaagaaggagggagctggagcgcaagcgtctgcgtgacgaggagcgtcgtaag
tggagggaggaggagaggaggaagcgtaaagaggccgacaagatgaagagactcgagaag
ccactggagaaagacaaggaccaagttaaagaagaaccaaaaattaagctcctgaagaaa
ccagacagaggtgaagatgctgattctgagaagcccaaagaaaaagccaagaaaccagag
cggccaatcaaagatgatcgatccatgagcagttctgatcataagaggcgtccaaacatt
gaaaataaggaagatcgaggaaggaaaacggacgatcatggccggaaggagttccgggag
cgtgactctgaccgtgaccgagagcgggagaaggagcggcggcagagagagaaggagcgt
ctcaggagacaggacgaagaacgacggagaaggcgagaaaggcaggatggagagaactcg
tacaggaagcgagaggtggaaggtaaaaaagaaaaggagcgtgccatggagcagaaaaag
ggcgaccatgttggagaatcctctcactcggagaggccggagaagactgccaaagaccac
aagaaagaggagagtgctaaaagagagcgcctgagaaataaggaccggcctgctattcag
ctgtaccagccaggagccagaagccgcaatcgaggtggaggcgagtgcaactctgccgat
gggaagccagacactgagcaggagaaagtggcagacaaaggagaagattga
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