Acanthopagrus latus (yellowfin seabream): 119007822
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Entry
119007822 CDS
T08233
Symbol
rnf4
Name
(RefSeq) RING finger protein 4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119007822 (rnf4)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119007822 (rnf4)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119007822 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-rbx1
zf_RING_Vps8
Prok-RING_4
RING_XB3-XBAT31
Rtf2
zf-C3HC4_4
zf-UDP
zf-RING_11
IBR_1
zf-RING_16
zf-RING_10
zf-C3HC4_5
zf-ANAPC11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
119007822
NCBI-ProteinID:
XP_036933636
LinkDB
All DBs
Position
18:complement(770356..778265)
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AA seq
262 aa
AA seq
DB search
MMLNSGNQLSSEKKKQKKKLTKQTILNYPAGNCLQKIKHRRVFSDMSSSAQRKRRTTGSP
LVSRPSSKTSRKANTNRAATTSRVANRTANISRTSDGDFAPPTETIDVMDNTEDSVEEVV
DLTCEGSEAAVVDLTNNDSVLLVDEVQCLSGCPPSGPQNRRVTTGESYIVSSDEDDTPPA
LNGAIMSSLHANSSSRSTPGTISCPVCLDSYSEIVESGRLVVSTKCGHVFCSQCLRDALT
SSHTCPTCRKRLTHRQYHPLYV
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgaactctggtaaccaactttcatcagagaagaagaagcagaagaagaagctc
acgaaacagacgatactgaactatcccgctggtaactgcttacagaagataaaacacaga
cgtgtcttcagtgacatgagcagctctgctcagaggaagaggaggaccacaggcagtcct
cttgtttccagacccagttccaagaccagcagaaaggctaacactaacagagcagctacc
actagcagagtggctaacaggacagctaacattagcaggacatcagatggtgactttgcc
ccccctacagagaccattgatgtgatggacaacactgaggacagtgtggaggaggtggtg
gatctgacctgtgagggctcagaagctgctgtggtcgacctgaccaataacgactcagtg
ctgctggtggatgaagtccaatgtctgtctgggtgtcctccgtcaggtcctcagaacagg
agagtcaccacaggtgagagttatatcgtcagcagtgatgaagatgacacgccccctgcc
ctaaatggtgcaatcatgtcgtccctacacgccaacagctcctccaggtcgacaccaggg
acgatcagctgtcccgtctgtctggactcatactctgagatcgtagagagcggtcgattg
gttgtatccactaaatgtggtcatgtgttctgcagccagtgtctgagagatgctctgaca
tcatcacacacctgtcctacctgcaggaagagactgacccaccgccagtaccaccccctc
tacgtctga
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