KEGG   Acanthopagrus latus (yellowfin seabream): 119007949
Entry
119007949         CDS       T08233                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:alat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:alat03041]
    119007949 (smu1a)
Spliceosome [BR:alat03041]
 Complex B
  Other components
   Complex B specific factors
    119007949 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Ge1_WD40 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_BBS7 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IP5PC_F VPS8_N PROPPIN TFIIIC_delta Beta-prop_NOL10_N LisH zf_topless WD_LRWD1 DUF7165 LisH_PAC1
Other DBs
NCBI-GeneID: 119007949
NCBI-ProteinID: XP_036933827
LinkDB
Position
18:complement(4953450..4959561)
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLHRTLVTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDSSQLLSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTPD
GHHIISASSDGTVKVWNMKTTECSSTFKPLGSSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctttggaggtggaatccgcagacgtgatccgtctgattatgcagtacctaaaggag
aataacctgcaccggactctagtcaccctgcaggaggagaccaccgtgtctctgaacact
gtggacagtatagagagcttcgtggcagacataaacagcggccactgggacacagtcctg
caagccatccagtccctcaagctgccagataagaccctgatcgacctttatgaacaggtg
gtgttggagctgattgagttgagagagctgggcgctgcccgttcactcctcaggcagacc
gaccccatgatcatgctgaaacagacccagccagagaggtacatccacctggagaacctg
ctggctcgctcttacttcgatcccagagaggcatacccagacggcagcagtaaggagaag
cgccgggcggccatcgcccaggccctagcaggggaggtcagcgtggtgccaccctctcgt
ctcatggctcttctgggacagtctctgaagtggcagcagcatcagggtcttctgcctcct
ggtatgaccatcgatttgtttaggggtaaagcagctgttaaagatgtggaggaggagcgt
ttccccacccagctcagcagacacatcaagtttggacagaagtctcatgtggagtgttcc
cgattctcccctgatggtcagtacctggtaactggctctgtggacggtttcatcgaggtc
tggaacttcaccacaggcaaaatcagaaaggatcttaagtaccaggctcaggataacttc
atgatgatggacgatgcagtgttgtgtatgtgcttcagtcgagacacagagatgttggcc
acaggagctcaggatgggaagatcaaggtgtggaagatccagagcggtcagtgtctgagg
aggtttgaacgcgcccacagtaaaggagtaacatgtgtcagtttctgcaaagacagcagc
cagctcctcagtgcctcctttgaccagacaatcagaatccatggactgaaatcaggtaaa
acccttaaagaattccgcggtcactcttcgtttgtgaatgaggccacctttactccagac
ggtcaccacatcatcagtgcctcctcggacggtaccgtcaaggtgtggaacatgaagacc
acagagtgcagcagcaccttcaaacctttgggctcatcagctggcaccgacatcacagtc
aacaacgtcatcctgctgcctaagaacccggagcactttgtagtgtgtaaccgctccaac
acggtggtcatcatgaatatgcagggacagatcgtgaggagtttcagctctggtaagagg
gaaggcggtgactttgtgtgctgcactctgtcgccccgtggcgagtggatctattgcgtg
ggtgaagactttgtgctctactgcttcagtacagtcactggcaagctggagagaacgctg
acggtccatgagaaggatgtgattggcatcgcccaccacccccatcagaacctgatcggc
acctacagtgaggatggtctgctgaaactctggaagccttga

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