Acanthopagrus latus (yellowfin seabream): 119008004
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Entry
119008004 CDS
T08233
Symbol
cnot7
Name
(RefSeq) CCR4-NOT transcription complex subunit 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119008004 (cnot7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119008004 (cnot7)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119008004 (cnot7)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119008004 (cnot7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
119008004
NCBI-ProteinID:
XP_036933920
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All DBs
Position
18:complement(13260673..13267610)
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AA seq
286 aa
AA seq
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MPAATVDHSQRICEVWANNLEEELKRIRHVIRKYNYIAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEDEGIETLYFAELLMTSGVVLCDGVKWLSFHSGYDFGYLIKILSNANLPEEEVD
FFEILRLYFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSAYVQNGTGNAYEEEANKQQS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagctactgtggatcacagccaaagaatatgtgaggtttgggccaacaacctg
gaggaggagctgaagaggatccgacatgtcatccgaaaatacaactatattgctatggac
acagagttcccaggtgtagtagccagaccaataggagagttcagaagcaatgccgactat
cagtaccagttactgcgctgtaatgtggacctgctcaagataatccagctgggcctcaca
tttatgaacgaacaaggggaataccctccaggaacatcaacatggcaattcaacttcaag
tttaacctcacagaagacatgtatgcacaggactccattgagctcctgaccacttcaggg
attcaatttaagaaacatgaggatgaaggcatcgagacgctgtacttcgcagagctgctg
atgacatcgggagtggtgctctgtgatggggtcaagtggctgtcttttcacagtggctat
gactttggatacctgatcaagattctgtccaacgctaacctgcctgaggaggaggtggac
ttttttgagattcttcgcttgtactttccagtcatttatgatgtcaagtacctcatgaag
agctgtaaaaacctgaagggcgggctgcaggaagtagctgagcagctggagctggagagg
atcggaccacagcatcaggccggctctgactctttactcacaggcatggctttcttcaaa
atgagagagatgttcttcgaggatcatatcgatgatgcaaagtactgtggtcacttgtac
gggctgggctccggctcggcctacgtccagaacggaacggggaatgcttacgaagaggag
gctaacaaacagcagtcgtga
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