Acanthopagrus latus (yellowfin seabream): 119008428
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Entry
119008428 CDS
T08233
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119008428 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119008428 (spata13)
Membrane trafficking [BR:
alat04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119008428 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
119008428
NCBI-ProteinID:
XP_036934618
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All DBs
Position
19:14400583..14416172
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AA seq
1268 aa
AA seq
DB search
MSRAEQKDRVLSTSEDPLPCILNSKADPLTRNRPLSDIYPFHSRADGSAVPYLLSGCGAQ
VQPMTGGPDENRLNGINSSAWSNPVIGQPEGKPYSARIMKLFSNSKKGPVPSLSPTTDGS
TSTNISGSNSGPQSWSGLSGLAVVDSFKKLRSSVLQGIQSRGAVNSDGEPVPSAIQDMAN
GTTVANTDSGPDDATDHFKFSEGYSVPNGNVMTQCGSDIEDYDDEENDEGDGLTRNTRFS
RSIRRAYGAGRISLLDTGNGRLAGRSTNAATGSQKANQISEANAQIENANKQTNVKVLSR
LSKSAENIHIFKAPFRRKATSPGPPSPEEDSQGTSTSNGTPSIHRTASASSVDFRGRAVS
RKKSPVKTKGPMLKLVGSMTDLTVRRRRSPSPSPTSPSLMSPLSRLHDDYSRRVPCLTTS
ERQRRPSPVRARVLSVEHTPLVHSQPENDVSSQQHQVLISPVSVEPPERTGPTLPGISVA
TTNAAEYDSSPLSQKEPSQQQEQSEVTALSNQVTSDKQGQEALFQTEDVSPIASSTPPIS
PTGLSESSTSPTDPSPTSSTQESAIKPRRRSGRPRPRPISDYGQLLSRKHSIPEEARELR
AEERTANASLHKDSSGDDMCASGESPESCNMNGDFQGLRHRPISVIGVGDLFPPDAEEKD
ERLPSSLSRPPIPSHQVPPYRAVSARFRPSVLSQSTPIGLDRVGRRKLHRVLSEGTSECS
VTLDDSVSEEEEEGSFDELTDVTPYLQPGVELSVLNEWISSGHTVYAEALWDHVTMGEQE
LAFKAGDVIRVLDASHTDWWWGRVADREAWFPSSFVRVRVNQEDSSAESVESVADQEDPT
PRDTHSAQHKEQMRTNVVQEIMNTERIYIKHLRDICEGYIRQCRKHPDMFTELQLKTIFS
NIEDIYRFQRQFLKDLEKKYNKDEPHLSEIGSCFLLQGEGFSIYSDYCNTHPAACAELQR
LMKLGKYKHFFEACRLLQQMINISISGFLLTPVQKICKYPLQLGELLKYTPKDHSDYSGV
SKAYEAMKNVASLINERKRRLESIDTIAHWQVAILHWEGSNVLERSSELIHSGELTRVVR
QGKMQQRSFFLFDHQLVFCKKDVLRRDLLHFRGRLDMDQTEVVDVPDGRDQDLGLTLRNA
LRLRNANTLEFICVLCCKKAQDKQRWLQAFAKERYRVKEDQEMGMEISEEQRKQAIVNAR
RAKHGKSKTIGYSGSVPPHHQNLHPLHQRHITIPTSVPQQQVFSLAEPPKRKPYHLLYSI
TRNAFFRK
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcagaacaaaaggacagggtcttgtccacaagcgaagaccctctcccgtgc
atcctcaactctaaagctgacccactgacccgaaatcgacccctcagtgatatataccct
ttccatagtcgtgctgacggaagtgcagtcccatatctgctgtctgggtgtggtgcccaa
gtacagccgatgactggaggccctgatgagaacagattaaacggcatcaactcctccgcc
tggtccaaccctgttataggtcaacctgagggaaagccttactctgcaagaattatgaag
cttttttctaactcaaagaagggccctgtgccttctctcagtccaaccactgatggctcc
acctctactaacatcagtggcagcaacagtggcccccagtcttggtcaggactttcagga
ctggctgttgtggactcctttaaaaagctccgctcctctgtgctccagggtatacagagt
agaggggcagtcaacagcgatggagagcctgtcccttcagcgattcaagacatggctaat
ggcactactgtggccaacactgactctggtccagatgatgcaacagatcatttcaagttt
tcagaaggatatagtgtgcctaatggaaatgtgatgacccagtgtggatcggatattgag
gattacgacgatgaggaaaatgatgaaggagatggactcacacgcaacacgcgtttctcc
aggagtatcaggagggcgtacggagcaggacgcatctctttacttgacacggggaatggg
agattagcaggaagaagcacaaatgcagctacgggcagtcagaaagccaatcagatctct
gaggcgaatgcccaaatagagaacgctaataaacaaacaaatgtgaaggtgctgagcaga
ctgagcaaaagtgcagaaaatattcacatatttaaggcacctttcagacgcaaagccaca
tctccggggcctccttcgccagaggaagacagccaggggactagcacatcaaacgggaca
ccaagcatccataggacggccagcgcctcctcagtcgacttccggggccgcgctgttagc
cgcaagaagagccctgtgaagaccaaggggccgatgctaaagctagtgggcagcatgact
gacctgactgtccgacgcaggcggagtccctctcccagccccacctctccatctctcatg
tcacccctgagccgtctccatgacgactactcccgccgtgtgccttgcctaacaaccagc
gagcgacagcgccgaccctcaccagtcagagcccgggtcctgtctgttgaacacacccct
ctggttcactctcagcctgaaaacgacgtcagctcacagcagcaccaggtcctcatcagc
ccagtttctgtggagcccccagagagaacaggaccaactttacccggcatttctgttgcc
acaacaaatgcagcagaatatgattcatctccactcagccaaaaagagccttcacaacag
caagaacagtcagaggtcactgcgctatcaaaccaggtgacatcagacaaacaaggccaa
gaggcacttttccaaacagaggatgtctctccaatagccagcagcacccctccgatctct
ccaacaggcctctcggagtcatccacatcacccacagatccatcccccacatcttccaca
caagaatccgctatcaagccaagacgaaggagtgggcgcccgaggcctcggccaatctct
gactatgggcagctcctttccaggaagcactccattcctgaggaagctagagagctgcgt
gcggaagaaaggacagcaaatgcatcactgcataaagacagcagtggtgatgacatgtgt
gcgagtggagagagccctgagagctgtaacatgaatggagactttcagggcttgaggcac
cggccaatctcagtgataggagttggggatctgttcccacctgatgctgaggaaaaggat
gagcgccttccttcttccctgtctcggccgcccatcccctcacaccaggtgcccccctac
agagcagtgtcagccaggtttcgcccctccgtactctcccagagcaccccaatcggattg
gaccgcgttggacggcgcaagctccacagagtgctcagtgagggtacgtctgagtgctcg
gtgacacttgatgacagcgtgagtgaagaggaggaggagggcagctttgatgaactcact
gatgtcacgccctacctccagccgggggtggagctctctgtgctcaacgagtggattagc
tcgggccacaccgtgtacgctgaggctctctgggaccatgtgaccatgggggagcaggag
ctggccttcaaagctggggacgttatccgtgtcctggatgcctcgcatacggactggtgg
tggggcagggtggctgacagggaggcctggttcccctccagctttgtgagggtgcgagtt
aaccaggaggactccagtgcagagagtgtggagagtgtagcggaccaggaggatccaact
cccagggacacacacagcgctcagcacaaggagcagatgagaactaatgtggttcaggaa
atcatgaatactgaacgcatctacatcaagcacctaagggacatctgtgagggctacatc
cgtcagtgccgtaaacaccctgacatgtttaccgagctgcagttgaaaaccatcttcagc
aacatagaggacatctacaggtttcagaggcagtttctcaaagacctggagaagaagtac
aacaaagatgaaccacatctcagtgaaataggctcttgttttctcttgcagggagagggt
ttctctatctactctgactactgtaacactcatcctgcagcctgtgctgagctgcagcgc
ctcatgaagttgggcaaatataagcatttctttgaggcctgccggctcctccagcagatg
atcaacatttccatttcaggtttcttgctcacacctgtccagaagatctgtaaatacccc
ctgcagctgggagagctgcttaagtacacccccaaagaccacagtgactacagcggagtg
agcaaagcatacgaggctatgaagaatgtggccagtctgataaatgagaggaaaagacga
ctggagagtatcgacaccattgctcactggcaggtggccattctgcattgggaggggtcc
aatgtgctcgaacgcagttcagagctgatccactctggtgagttgactcgagttgtccgg
caaggcaaaatgcaacagcgcagcttcttcctgtttgaccaccagttagtcttctgtaaa
aaagacgtcctgcgcagagatctgctccacttccgtggacggctggatatggaccagacc
gaggtggtggatgtgcccgacggacgggaccaagaccttggcctgaccctgaggaatgct
ctgcgtctgcgcaacgccaacactttggagtttatttgtgtgttgtgctgcaagaaggct
caggacaagcagaggtggttacaggcctttgccaaggagagatacagagtcaaggaagac
caagagatgggcatggagatcagtgaagagcaaagaaaacaggccattgttaacgcaaga
agagccaaacacgggaagagtaaaaccattggttactctggttctgttccaccacaccac
caaaacctgcacccacttcaccagcgtcacatcaccattccaaccagcgtgcctcagcag
caggtcttttcactggccgagcccccaaaacgaaagccttatcacctgttgtacagcatc
actcgcaatgcctttttcaggaaatga
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integrated database retrieval system
