Acanthopagrus latus (yellowfin seabream): 119008567
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Entry
119008567 CDS
T08233
Name
(RefSeq) cadherin-20-like isoform X1
KO
K06807
cadherin 20, type 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119008567
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Major cadherins
119008567
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
TAS2R
Motif
Other DBs
NCBI-GeneID:
119008567
NCBI-ProteinID:
XP_036934913
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Position
19:22394083..22423913
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AA seq
803 aa
AA seq
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MGDRLPLPALAGTLLLVVLGLLTLLPHSILGKPAEEEEEAANAGSSALLQRVKRGWVWNQ
FFVLEEYTGLEPLYIGKLHSDMDKGDGSIKYILTGEGAGTTFTIDDSTGDIHAIQRLDRE
VKAQYALRAQARNRLTDRPLEPESEFIVKIQDINDNEPKFLDGPYQASVPEMSKIGTSVI
QLTATDADDPTYGNSARVVYSILEGQPYFSVDAKTGVVRVSLADMDRETRENYSVVIQAK
DMGGQLGGLAGTTTINITLSDINDNPPMFDQRLYQMSVPESAPVGSVVGRIWAKDRDIGV
NAEMRYSIIDGDGRDTFDISTDPTNLFGIITVKKPLDFEKKPSYTLKVEGANINVDPSLR
YRGPFKDVTIVHVSVEDVDEPPVFDSPVYYIELPEDAEIGTMLKTVSARDPDAANNTVRY
SIERSSDPDKFFYIEITSGSLMTVRSLDREEIGWHNITVLAMEMNNPSQIASVLVAVKVL
DVNDNPPSLTHYLEAYVCETAKAGQLIQTVTAVDPDEPLGGQHFYYSLAPEAANNPNFTL
KDNQDNTAWILTRRGGWSQQDQTVFYLPIFISDGEQPVQTSTSTLTIRVCSCDQKGNVMS
CNAEAYSLPASLSRGALIAILACIFVLLVMILLMLSLRTHRKKPYLCDEEENVHENIVRY
DDEGGGEEDTEAFDIAAMWNPREAHNHHLNKLRQDMLPEIESLSRYVPQVCVMGGGGGGD
SNVHGYVLAKLLEADMDPCAPPYDSLQTYAYEGEGSIAESLSSLQSGTSNTDHEYDYLND
WGPRFKKLAEMYGVLETNSPPLW
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccgactgcctcttccagcgctcgccggcaccttgctcctcgtggtcctcggc
cttttgacccttctgcctcacagcattctgggtaaaccggcggaggaggaggaggaggcg
gcgaacgcaggtagctcggcgctgctgcagagagtgaagcgaggctgggtgtggaaccag
ttctttgtcctggaggagtacaccggactggaaccactttatatcggaaagctccactca
gacatggacaaaggcgacggctccattaagtacatcctgaccggcgagggcgccggcacc
accttcaccatcgacgacagcacgggcgacatccacgccatccagaggctggaccgggag
gtgaaggcccagtacgccctccgcgcccaggcccgcaaccgcctgaccgaccggcctctg
gagcccgagtccgagttcatcgtaaagatccaggacatcaacgacaacgagccgaagttt
ctggacggaccgtaccaggcgtctgtgcccgaaatgtccaaaataggaacatctgtgatc
cagctgaccgccacagatgccgacgacccgacgtatggcaacagcgctcgtgtggtgtac
agcatcctggagggccagccttacttctccgtggacgccaagaccggcgtggtccgggtg
tcccttgccgatatggaccgggaaaccagagagaactactcggtggtcatccaggccaag
gacatgggcggccagctcggggggctcgctggtaccaccacgatcaacatcacgctcagc
gacatcaatgacaacccgcccatgttcgaccagaggctgtatcagatgagcgtcccagag
tcggcgcccgtggggtcggtggtgggtcggatctgggccaaggacagggacatcggggtc
aacgccgagatgaggtacagcatcatcgatggagacggaagggacacgttcgacatcagc
accgaccccaccaacctttttggcatcatcacagttaaaaagccgctggactttgagaag
aagcccagttacactctgaaggtggagggcgccaacatcaacgtggacccgtccttgcgt
taccgcgggcccttcaaggacgtcaccatcgtgcacgtgagcgtggaggacgtggacgag
cccccggtgttcgactcgccggtgtactacatcgagctgccagaggacgccgagatcggg
acgatgctgaagacggtgtcggcgagggatcctgacgctgccaacaacactgtgaggtat
tccatcgagcggtccagtgacccggacaagttcttctacatcgaaatcacgtccgggtcg
ctgatgacggtgcgttcgctggaccgagaggagatcggctggcacaacatcaccgtcctc
gccatggagatgaataacccctcgcagatcgccagcgtgttggtggcggtaaaggtcctg
gatgttaacgataatcctccctcgctgacgcactacctggaggcttatgtgtgtgaaacc
gccaaagcagggcagctgatccagacggtgacggcggtggatccagacgagcccctcggt
ggacaacacttctactacagcttggctccagaggccgccaacaaccccaacttcaccctg
aaagacaaccaagacaacacagcgtggatcctgacccgtcgcggcggctggtcgcagcag
gaccagaccgtcttctacctccccatcttcatctctgacggcgagcagccggtccagacc
agcaccagcacgctgaccatccgcgtgtgcagctgcgaccagaagggaaacgtcatgtcg
tgcaacgccgaggcgtacagcctgcccgcgagcctcagcagaggagcgctcatcgccatc
ctggcctgcatcttcgtcctgctggtgatgattctcctcatgctctccctgcgcacccac
cgcaagaagccctacctgtgcgacgaggaggagaacgtccacgagaacatcgtgcgctac
gacgacgaaggcggtggcgaggaggacaccgaggccttcgacatcgccgccatgtggaac
ccgcgcgaggcgcacaaccaccaccttaacaagttgaggcaggacatgctgcctgagatc
gagagcctgtcgcgttacgtccctcaggtgtgcgtcatgggcggcggcggcggcggggac
agtaacgttcacggatacgtgctggcgaagctcctggaggccgacatggacccgtgcgct
ccgccttacgactccctgcagacctacgcctacgagggggagggatcgatcgcggagtcg
ctcagctcgctccagtcggggacgtcgaacacggaccacgagtacgactatctcaacgac
tgggggcctcgctttaaaaaactggccgagatgtacggcgtgctggagacaaacagtcct
ccgctgtggtag
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