Acanthopagrus latus (yellowfin seabream): 119008669
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Entry
119008669 CDS
T08233
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119008669 (scrib)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
119008669
NCBI-ProteinID:
XP_036935120
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All DBs
Position
19:complement(15358648..15424101)
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AA seq
1801 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQTVPDEVYRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENHLEELPSELN
GLLALTDLLLTQNLLEVVPDSIGCLKQLSILKVDQNRLTDLTDSIGECENLTELVLTENL
LQSLPRSLGKLKKLTNLNVDRNRLGSVPKELGGCASLNVLSLRDNRLGKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDSNLNRVSVIQFQEETKAEEEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEERRNEAYTSRPDGEEEGLDAQEKRLSDLSNQSHDSQVSNSTLSATSHEDRHN
TAAVTRREDLIDGHSPQEEEELDEMEVEYIEPTVHFAEEPIIRGGDEEDEEDGEDGERSE
EEDERPAFPMEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDGLNSPTQATQDE
QDEEEDDVLCTPQHHHRMEELGDSRLQVNSSQVKGVSFDQVNNLLIEPARIEEEEHTLNI
QRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKLLEVNGVDLHEA
EHHTAVEALRSSGATVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGLAFNLETT
PSGPHQRLSTCLIRNDKGLGFSIAGGKGSTPYRTGDTGIYISRIADGGAAHRDSTLHVGD
RVISINGVDMTEARHDQAVALLTGTSPTIALLVERDPNAPGGSPGQSRARAHSPPPPEPS
DSPDQEEEGLLHGNHLNQMEDEYPIEEVTLVKSGGPLGLSIVGGSDHASHPFGVNEPGVF
ISKVIPHGLACQSGLRVGDRILEVNAIDLRHATHQEAVRALLANKQEIRMLVRRDPSPPG
MQEILIQKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLQVGMRI
LEVNNHSLLGMTHTEAVRVLRAVGDTLGMLVCDGFDPQKVAAVESSPGIIANPFATGIVR
KNSMESISSIDRDLSPEEIDIMQKESEMVRETSQWEREEMEKVERMRLEREEATRLLEEE
TENIGTGPLKLDYKTLAALPTTSLQKLNRAPSSDYTRTESPIREAPYSPTIQPANIHYSS
TPTAKDDTSSSTRPGAIQPVGRVRQTSSPATPDGHSPNPFQHGPSPFNSQTSDLYSVRNN
FHPKQPSPEPELINEVFDDDIEGKGLAGKLSPRREYLNLAAVPRFSRPSMELQFLQSPSP
SGKASPEQRSFRDRQKYFEIDVKQQTPEKPKPRVSLVGEDDLKKMREEEERKFEQRAREY
LLDEDDEDDEEDLAKQVAQMKASGKVLLDGVEYKVEPVSTPTQHCSTPPSYNVTPPSYCG
SSGPSSVDGKGDSQRNSLEDSFRLEQRPNSMTGLIPMYQADSSAPIRTAKAERRHQERLR
MQSPELAVAPDKDLSPAEKRALEAEKRAMWRAARMKSLEQDALKAQMVIAKSRDGKKRGT
LDQLTESPSPAPTPSPTPVEELSPRGLTSPGRLSLSSKKFDYRQFAAIPSSKPVYDIQSP
DTVDDLQFIDDGSSNPGPAASPEAEVTTALPATSALEEMALYSNKRKLRQGRRSLETAVP
T
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaaccgccacgtcgagtcggtggacaagcgg
cattgcagcttgcagacagtccctgatgaggtgtaccgctacagtcgcagcctggaagag
cttctcctcgatgccaatcaactcaaagagctaccaaagcctttcttcagactactgaac
ctccggaagctcggcctgagtgacaatgagatccagagactccctcctgaggtggctaac
ttcatgcagctggtggaactggacatctccagaaatgacattcctgagatccctgagagc
attaagttctgcagggctttggagattgcagacttcagtggaaaccccctgtccagattg
ccagatggcttcactcaactccgagcgctggctcacttggcactcaacgacgtgtcattg
cagacgttgcccaacgacattgggaacctagccaacctggtgacgttggagctcagggag
aacctgctgaagtctctgcccacgtcgctctctttcctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagttttgccggatacccttggtgctctccccaacctgagg
gagctatggctggaccgtaaccagttgtcctcattaccaccagagctggggaacctccgg
agactggtgtgtctggatgtgtcagagaatcatctggaggagcttccctcagagctaaac
ggccttctggctctcactgacctgctgctcacacagaacctgctggaggtcgtcccagac
agcataggctgcctgaaacagctgtccatcttaaaggtggaccagaacagactgaccgac
ctcactgattcaataggagagtgtgaaaacctcacagaactcgtcttgacagagaatctt
ttacagtcacttcctcgctcgctgggcaagctgaagaagctgaccaacctgaatgtagac
cgcaaccgtttgggcagcgtgcccaaagagctgggcggctgtgccagcctcaacgttctc
tctctgagagacaaccgtctgggaaaactgcctgctgagcttgcagatgccactgagctg
catgtgctggatgtagctggaaacagattacaaaacctgcctttcgctttgacaaacctc
aatctgaaggccatgtggctcgcagagaaccagtcacagccgatgctcaagttccaaaca
gaggacgacgagcgaacaggagagaaggtgttgacctgctatttactaccccagcagcct
tctccaagcctagagaacttgttgcagaacagtgtggatgacagttggacagacagtaac
ctgaaccgagtgtcagtcattcagttccaggaggagaccaaagctgaggaggaggatgat
gaggctgctgcagagcgcagaggccttcagcgaagagccacaccgcacccgagtgaactg
aaggtgatgaagaaagtgatcgaggagaggaggaatgaggcctatacatccagacctgat
ggagaagaagagggccttgatgcacaggagaagcggctcagtgacctgtccaatcagagc
catgactctcaggtctctaatagcacactatcagccacctctcacgaggacagacacaac
actgctgctgtcacacggagggaggatctcatagatggccactctcctcaggaggaggaa
gagctggatgagatggaggtggagtacattgagcccactgtgcactttgccgaggagccc
attatccgtggcggggatgaggaagatgaggaggacggtgaagatggcgagaggagcgaa
gaggaagacgagaggcctgcctttcccatggagaagcagcgtcttattaggaaagacacg
ccacactacaagaagcacttcaagatcaccaagctgcccaagcccgaggcggtggccgcg
ttgctgcagggcttcagtccggatggccttaactccccgacacaggccacccaggacgag
caggacgaggaggaagacgatgttctgtgcacccctcagcaccatcacagaatggaggag
cttggggacagtcggctccaggtcaacagcagtcaagtcaagggggtgtcatttgatcaa
gtcaataatctgctgattgaacctgctcgaattgaggaggaagagcacaccctgaacatc
cagcgacaaacaggcggactgggtatcagcattgcaggagggaaaggatctacaccttac
aaaggagatgacgagggaatcttcatctccagagtttctgaggagggtcctgcagccaga
gcaggggtgaaagtgggagacaaactcctagaggtcaatggagtggacctccatgaggca
gaacatcacacagcagttgaagctctccgtagctccggcgccacagtttccatgacggtg
ctgcgggagcgtatggtggagccagagaacgccatcactacaacgccgctgaggccggag
gatgactatttcccacgggagagacggagcagcggacttgccttcaacttggagacaact
cctagcgggccccaccagcggctctccacctgcctgatccgaaacgacaaggggctggga
ttcagcatcgcagggggcaaaggctccacaccctaccgtactggagacacgggaatctac
atctctcgcatcgcagacggaggagcagcacacagagacagcacactgcatgttggcgac
agggtgatctctatcaatggtgtagacatgacagaggccaggcatgaccaggcagtagcg
ctccttaccggcacctcccccaccatcgccctcctggtggagcgagacccgaacgcacca
gggggctctccaggtcaatcccgggcacgagcccactcccctccacccccagaaccctca
gattcacccgaccaggaggaggagggcctccttcacgggaaccacctgaaccaaatggag
gacgagtatcccatcgaggaagtgaccctggtgaagtcaggtggccctctaggcctgagc
atcgtaggaggtagtgatcatgccagtcaccctttcggcgtaaatgaacccggggttttt
atctcaaaggtgattcctcacggtcttgcatgccaaagtggactgcgtgttggtgaccga
atattagaagtgaacgccatcgacctgcgtcacgccacccaccaggaagccgtgcgagcc
ctgctggccaacaagcaggaaatccgtatgttagtgcggagggacccatcaccacccggg
atgcaggaaattttgatccagaaacagccaggggagaagcttggcatcagtattcgtgga
ggggccaaaggtcatgcaggaaacccgtttgacccaacagatgaaggcatcttcatctct
aaggtgagttccagcggtgccgcagcgagagacggcaggctgcaggttggcatgcgtatc
ctggaagtgaacaaccacagtctgctggggatgacgcatacggaggcagtacgagtcctc
cgtgctgtaggagacaccctgggcatgctggtgtgtgacggctttgacccacagaaagtg
gctgctgtggagtcttctcctggcatcattgccaacccgtttgcaacaggcatcgtccgt
aagaacagcatggaaagcatctcttctatagaccgagacctgagtccagaggagatcgac
atcatgcagaaggaatctgagatggtgagagagacatcgcagtgggagcgagaagagatg
gagaaagtggagcgaatgcgattggagcgagaggaggcaactcgcctgctagaagaggag
actgagaacattggcactggacctctaaaacttgactacaaaaccctggcggcactgccc
accaccagtctgcagaaactcaacagggcgccttcctctgattacaccaggacggagagc
ccgatcagggaagctccgtactctcctactatccaaccggcaaacattcattacagctcc
actcctactgccaaggatgacacgtcatcatcaacgcgaccgggtgccatccagccagtc
gggcgcgtgcggcagacctcctcccctgccaccccggacggccacagtccgaaccctttc
cagcatggcccctcccccttcaactcccagacctctgacctgtacagtgtgaggaacaat
ttccacccaaagcagccatctccagagcctgagttgatcaacgaggtgtttgatgatgac
atagagggtaagggtctggccggcaagctctctccccgtcgggagtatttgaacctggca
gcagtgcctcgcttctccaggccgtccatggagctgcagttcctgcagagtccttctcct
agtggtaaggccagcccagagcagcgctctttcagggaccgacagaagtattttgagatt
gacgtgaagcagcagacaccagaaaaacccaaacctcgggtatctcttgttggagaagat
gacctcaagaaaatgagagaggaagaagagaggaagtttgagcagcgagcgcgggagtat
ttgttggatgaagatgatgaggatgatgaggaggacctggctaagcaggtagcgcagatg
aaggcctctggcaaagtgttgctggatggcgtggagtacaaggtggagccagtatccacc
ccgacgcagcactgctccaccccaccaagctacaatgtcacaccacccagctattgtggc
agctcagggccttcctctgttgatggcaaaggagactctcagaggaattcactggaggac
agcttcaggctggagcagaggcccaactcaatgactggtttgatcccaatgtaccaagcg
gactcgtcggcccccatccgcacagccaaagcagagcgcagacatcaagagagacttcgt
atgcagagccccgagctggctgtggcccctgacaaggacctgtcccctgcagagaaacga
gctctggaggctgagaagagagccatgtggagggcagcacgaatgaagtctctggagcag
gatgcactgaaagctcagatggtcatcgccaagtctcgggacgggaagaaacgcggcaca
ctagaccagctgacggagtcgccctcgcctgcccccacaccttcaccaacacccgtggaa
gagctcagtcctcgaggactaacctctccaggcaggctgtccctgtcgtcaaagaagttt
gactaccgacagtttgctgccattccttcttccaaacccgtatacgacatccagtccccc
gacacagtcgatgacttgcagttcatcgacgacggctccagtaacccagggcccgctgcg
agccctgaggctgaggtaaccaccgcgctgcctgccacctcagccctggaggagatggct
ttatacagcaacaagcgcaaactgaggcagggccgccgcagcctggaaaccgctgtgccc
acgtaa
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