Acanthopagrus latus (yellowfin seabream): 119008886
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Entry
119008886 CDS
T08233
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119008886 (trpc1)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119008886 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
119008886
NCBI-ProteinID:
XP_036935502
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Position
19:complement(17629675..17645363)
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AA seq
796 aa
AA seq
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MHISVWPYSLSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNINCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSICYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGTKNTMGPPLGM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKIVAHNKFKN
VGDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDHKNPDKNQTKDCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVTSMSKWICSHTSKGKVKRQNSL
KEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtttggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggacgcctcctctccggataaatttctggccctgaaagacgtgagagaggtgaaggag
gagacgacgctggacgagaagctcttcctgctggcgtgcgagaaaggtgactactatatg
gtgaagaagctgctggaggagaaccgacacggcgagctcaacatcaactgcgtggacgtg
ctgggccgggatgccgtcaccatcaccatcgagaacgagaatctggacatcctgcagctt
ctcctggaacatggctgccaggcgacagacgccttgttggtggccatagactccgaggtg
gttggagcagtagacatcctcctcaaccacaggccgaggcgatcctccaagccctccatc
gctaaactgatgcagcggatccagaacccggagtactccaccaccatggacgtggctcca
gtcatcctggccgcccacagaaacaattacgagatcctgaccatgctgctcaagcaggac
atctctctgccccggccccacgccgtgggctgcgagtgcacgctctgcaacgccaagaac
aagaaggacagcttacgacactccaggttccgcctggacatctaccgctgcctggccagc
ccctctctgatcatgctgaccgaggaggatcccattctcagggcctttgagctgagcacg
gacctcaaggagctcagcctggtcgaggtggagttcaggaacgactacgaagagctggcg
aagcagtgcaagatgttcgccaaggacctgctggctcaggctcgaaactcccgagagcta
gaagtgatcctcaaccacacgtccagcgaggatcacgtcgacaagaggggcctgctggag
gagcgcatgaatctcagtcgactcaagctcgccatcaagtacaaccagaaagagttcgtg
gctcagtccaactgtcagcagttcctcaacaccgtctggttcggagagacggccagctac
cgccgcaaacacacctgtctgaagatggccacggtgctgagcgtggcgatgctctggccg
ctgctctccatctgctaccttctggtgccgcgctcccgcgtgggccagatcatccacacg
cccttcgtcaagttcatcatccacagcgcctcctacttcaccttcctgctgctgctcaac
ctgtactctctggtctacaacgagggcacgaaaaacaccatgggccctccgctggggatg
atagactacctgctcatcctctggatcatagggatggtgtggtcggatgtgaagcgtctg
tggtacgaggggctggaggactttctggaggagtctagaaaccagctgagcttcgtgatg
aattccctttacttagccaccttcgccctcaagattgttgctcataacaagttcaagaac
gtgggggacacagagaggaagaactgggacgccttccatcccatcctggtggccgagggc
ctgttcgccttcgccaatgtcctgagttacctgcgactcttcttcatgtacaccaccagc
tccatactgggaccgctacagatctccatgggtcagatgctgcaggagttcggaaagttc
ctgggcctcttcctgctggtgttgttctccttcaccattggactcactcagctttacgga
aaggaccacaaaaacccggacaagaaccaaaccaaggactgcgagggcatattctgccag
cagcagagcaacgacgcattccacacgtttatggggacctgctacgccttattctggtac
atattctccctggcgcacgtcgcgctcttcgtcacccgcatcagctacacggaggagctg
cgttcgttcgtgggcgccatgatcataggcacctacaacatcgtggtggttatcgtgctg
accaagctgctggtggcaatgctccacaaaagcttcagacagatcgctaatcacgaggac
aaggagtggaagttcgcccgtgctaaactgtggctcagctactttgacgacaagtgtacc
ctgcctccgccgtttaacatcctcccctccccaaagactgtctgctacctggtgaccagc
atgagcaagtggatctgctcgcacacctccaagggcaaagtgaagagacagaacagcctc
aaggagtggaagaacctgaagcagaagcgggacgagaactaccagaagatcatgtgctgc
ctggttcaccgctacctgacgtccacgcggcagaagatgcaaagcacggaccaggccacg
gtggaaaatctgaacgacctgcgccaagacctctccaagtttcgcaacgagatgagggac
ctgctcggcttccggacctccaaatacgccatgttctacccgaggagctaa
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