Acanthopagrus latus (yellowfin seabream): 119008939
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Entry
119008939 CDS
T08233
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119008939 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119008939 (smarcd3b)
03036 Chromosome and associated proteins [BR:
alat03036
]
119008939 (smarcd3b)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119008939 (smarcd3b)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119008939 (smarcd3b)
PBAF complex
119008939 (smarcd3b)
GBAF(ncBAF) complex
119008939 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
SWIB_eIF2D
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
119008939
NCBI-ProteinID:
XP_036935596
LinkDB
All DBs
Position
19:complement(15579643..15625236)
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AA seq
533 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQQAVQNRARKKPVGFPGANEMPARQMDMRE
PQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAL
KRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFK
SLVIELDKDLYGPDNHLVEDCLGVVRPHLTHTAVNWHRTPTTQETDGFQVKRPGDVSVRC
TLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYIKTNKLQDSHDKEYINCDKY
FQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKS
QMSSFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRD
LKLMTDVVGNPEEERRAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaggga
gctcccatgggcccccccggcccaccgtacggagggagcccggcggtgcggcccggcctg
ccctccccggtgatggagcccagccgtaagaggcctgccccctcccagcaggtccagcag
cagcagcagcaacaacagcagcagcagcagcagcaggccgtccagaaccgggccaggaag
aagccagtcggattcccgggagccaatgagatgccggcgaggcagatggacatgagagag
ccccaatcagatcccacgctcggatcaaatgctaagagaaggaaaatggcagacaagatt
cttccgcaaaggatccgtgagctggtccccgagtctcaggcctacatggatctgctggcg
tttgagcgcaaactggaccagaccatcatgcgcaaacgtgtggacatccaggaggcgctg
aagagaccgatgaagcagcaaaagcgtaaactgagactttacatatccaacaccttcaac
cctgccagaccggacgctgatgactcagacggcagcattgcatcttgggaactgcgagtg
gagggaaagttgctggatgatccggggaagcagaaaaagaagttctcttcgttttttaag
agcctggtgattgagctggacaaagacctctacggtcctgacaaccacctggttgaggac
tgtctgggtgtggttcggccacatttgactcacactgctgtcaactggcaccgcacgccc
accacccaggagacggacggcttccaggtgaagaggccgggagacgtgagcgtgcgctgc
actctgctgctgatgctggactaccagcctccccagtttaagctggaccctcgcctggct
cgcctgcttggcattcacactcagacccgctcctgcatcatccaggccctctggcagtac
atcaagaccaacaagctgcaggactcccatgacaaggagtacatcaactgtgacaagtac
ttccaacagatctttgactgccctcggctgaagttctctgagatccctcagcgcctcacc
aacctcctcttaccccccgaccccatcgtcatcaaccacgtcatcagcgtggatccaaac
gaccagaagaagacggcctgctacgacatcgacgtggaggtggaagaccccctgaagagc
cagatgagcagcttcctcctctccaccgccaaccagcaggagatcgcctcgctcgacaac
aagatccacgagaccatcgagtccatcaaccagctgaagatccagagggacttcatgctc
agtttctccagagatcccaagggctacatccaggactggctcaaatcccagagccgagac
cttaagctgatgacagacgtggtggggaaccctgaggaggagaggagggcggcgttttac
cacgagccctggtcccaggaggccgtcagccgctatttctactgcaagatccagcagagg
agacaggagctggaacaggccttagctgtgcgcaacacctaa
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integrated database retrieval system
