Acanthopagrus latus (yellowfin seabream): 119008944
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Entry
119008944 CDS
T08233
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119008944
Pattern recognition receptors [BR:
alat04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
119008944
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
LRR_1
TIR_2
LRR_14
LRR_9
LRR_EndoS
LRR_6
LRR_NXF1-5
ThsB_TIR
YwiC
Motif
Other DBs
NCBI-GeneID:
119008944
NCBI-ProteinID:
XP_036935611
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All DBs
Position
19:complement(20318106..20326370)
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AA seq
964 aa
AA seq
DB search
MGPGVKEDKTRPKGGPECIKLSIIFLLLNINHFVAPVTGYSLRNCRISQGKALCTKNRQQ
VTEVPQDIPSTVEGIDLSSNKISKIHVSDFKFFPVLTTLDLNSNRITQIDTGAFANLTSL
KKFNLNNNRLDALGDNLFYGLSNLAELRIHGNKIKSVASTSFKSLRSLTFLDISNNKLHQ
LNNVHLIIKHLPNLQVLYLQYNDINYFNSWELTNSSLGLTSLDLSQNGLKVFNITADIFP
NLTWFNIGQFSSKKTVKWDVHNKTFLSRVSTLDISRLHLKMDDMKALLESVNSSLSTLRM
TEMKHNLLLTLINISCTIPTMSKLQLRHNQLSVIQSHFFQLCVNVTELDLSYNQIQNIED
GAFRSTQGIKILTLSHNRLSSVPTPVRNLSNLTELDLSSNEITKLECQNFANMTKLRHLH
LSNNSFPALQDCLFKDLIQLQDLKLQNNSISDLKSALKKSLPNLRQLHLNQNKLTAIKHG
DFMGLRSLQNLSLHENQIRKLDKGCFIGLTNLTNLQLQANSLEEDSIRHGTFNNLKNLRK
LDLSNNHIRYKKSSALHPPPFSNLSRLETLAFYVQRRRERAYLPCNILQGLTNLLVFDMR
NLHLPSFPKDVFKYTPQLQTLDIRSNELSDLSPDLFSPIQSLEKLYISTTNLRSLDFLID
ANLTKLKFIEAKKNQLHVIRKEIINSLPALVYLDLEGNSFTCDCDNVWFLLWVKKSNQTQ
VFDAYNFECNYPAVMRGRKLMDFDPQSCKDNIDFICFISTTSTILLLMVVSYTYHFLRWQ
LAYAYYFFLALLFDAKNKNRQTHNQYDAFISYNAHDEPWVIRQLLPKLEDEQGWRLCLHH
RDFEPGKPIIDNITDAIYGSRKTICVISRRYLESEWCSREIQVASFRLFDEQKDVLILVF
LEDIPSYQLSPYYRMRKLLKKKSYLSWPRAGEHTNLFWEKLRQALKTSEHPEDDKFQLTV
VDRP
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctggagtaaaggaggataaaaccagaccaaaaggaggaccagaatgcatcaaa
ctaagtattatcttcctcttgttgaatatcaaccattttgtcgctccggtcacaggatat
tcactgagaaattgccgaatcagtcagggaaaggccttatgtaccaagaacaggcaacaa
gtcacggaagttcctcaggatattccctcaacagtggaaggtattgacttgtcgtccaac
aaaatttctaaaatacacgtttcggatttcaaattttttcccgttttgacaaccttggac
cttaattccaacagaattacgcagatagatactggtgcatttgcgaatctgacttccctc
aaaaagttcaatctaaataataacagacttgatgcacttggagataatcttttttacggt
ctgagcaacctcgcagagctgagaatccatggcaataaaatcaaatcagtagcatccact
tcctttaagtccttgaggagcttgacgtttttggatatctctaacaacaaactgcatcaa
ctgaataatgttcatcttataataaagcacctgccaaatctacaagttctgtatctgcaa
tataatgacatcaattactttaattcctgggaactgacaaacagctcacttggactgacg
tcacttgatttatctcaaaatggccttaaggtgtttaacatcactgcagatatttttcca
aatctcacctggtttaacattggccaattttcatcgaagaaaacggtaaaatgggatgtg
cacaacaaaacctttctcagtcgagtgtctactcttgatattagtagactccacttgaaa
atggatgacatgaaagcgttactcgagagtgtcaactcctctctgagtactctgaggatg
accgaaatgaaacataaccttttattgacgctaatcaacatttcctgcaccatcccaacg
atgtccaaactccaactcagacataaccaactcagtgttatccagtcccatttctttcag
ttgtgtgttaacgtaacagaattagatttatcatacaatcaaattcaaaacatcgaagac
ggggccttcagatctactcagggtataaagatcttgactttgagtcataacagactttca
tccgttccaactcccgtaaggaatctatctaatctcactgagctggacctcagcagtaat
gaaatcaccaaacttgagtgtcaaaattttgccaacatgacaaagctccgacatctccac
cttagtaataattcattcccagctctacaagactgtcttttcaaggatttaatacaactg
caagatttaaagctgcagaacaactccatctctgacttgaaatctgctctcaaaaagtcc
ctgccaaatctcagacagctgcatttgaatcagaataaactcaccgccattaaacatggg
gactttatgggcttgcgatccctccagaacttgtcgttacatgaaaatcagataaggaaa
cttgacaaaggatgttttattggattgacgaatcttacaaatcttcagctgcaagcaaat
agccttgaagaagactccataagacatggtacttttaataatctgaaaaatttaagaaaa
ttggacttgagtaacaatcatattagatataaaaaaagttcagctttgcatcctccacca
ttttctaacctgtcccgtctggagacgctggctttttatgtacaacgccgcagggagaga
gcctatctgccttgcaacatcctgcaaggtttgacaaatcttttggttttcgatatgagg
aaccttcaccttccatcctttcccaaagacgtgtttaaatacactcctcaactacaaaca
cttgacataagatcgaatgaactttcagatctctctccggacttgttttccccgattcaa
agcctcgaaaaactctacatatcaacaacaaaccttcggtctctagatttccttattgat
gccaaccttactaagctgaagttcattgaggcgaaaaagaaccaacttcatgttatcaga
aaggaaataatcaattctctaccagctcttgtttatctggatctcgaaggcaacagtttc
acctgtgactgcgataatgtttggttccttctgtgggtaaaaaagagcaaccaaacgcaa
gtttttgatgcctacaactttgagtgcaactatcctgcagtcatgagaggtaggaaactg
atggactttgacccccagtcctgcaaagataatatcgacttcatctgcttcatctccacc
acgtctacgatcctcctcctcatggtggtgtcctacacctaccatttcctgaggtggcag
ctggcttacgcctactacttcttcttggctttgctctttgatgcaaagaataaaaacagg
caaactcacaatcagtatgacgcctttatctcctacaatgcccatgatgagccatgggtc
atcagacagctgctgccaaaactggaagatgagcagggctggagattgtgtctgcaccat
cgagactttgagccaggtaaacccatcatagacaacatcacagacgccatctacggcagc
aggaagaccatctgcgtcatcagtcgcagatacctggagagcgagtggtgctccagagag
atccaggtggccagcttccgtctgttcgatgagcagaaggacgtgctgatcctcgtgttt
ctggaggacattcccagctatcagctctctccttactaccgcatgaggaagctcctgaag
aagaagtcctacctgagctggcctcgagccggcgagcacaccaatctgttctgggagaaa
ctccgccaggctctgaagaccagcgaacatcccgaggacgacaagttccaactaactgtg
gtggacagaccgtga
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