Acanthopagrus latus (yellowfin seabream): 119008992
Help
Entry
119008992 CDS
T08233
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119008992 (rnf6)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119008992 (rnf6)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119008992 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
119008992
NCBI-ProteinID:
XP_036935711
LinkDB
All DBs
Position
19:14574473..14579911
Genome browser
AA seq
719 aa
AA seq
DB search
MDPPGGGDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRHRLD
GAKERMSSQPRPEQRSQTADSGEQQGSSGEGDERGAGGRRGTGGTEPGAETSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHNDTADTAE
LPVTAPNTTSTSIRTASSFSNPRPSTTPRPTPYPTTRPALSRRMQTRRTRSSTATLSMSP
PALPAPVATPTAAPRRGATLHSLAPPPTVPSPPPDQTAPLQQQAPNADVEQGSDQMSASI
NCPRVSPQSVSQAPAVGHESRGSRTRSRGRARRAAAGGGVSSRLSRRSRSPLHRIPATST
TPPSSIGISGSSIHTVEPGSGTSSVSMETGEAVAEPAATTEPAVETGERENESHVIGSGS
SAVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRS
ERAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEADSETVS
PNHTDASGTNSNTSPTSRLNSNESAASQVGTGAVDQERVGLVGSEEDQGGQARLSGGVVS
TTEGRATSRDTNNLVENGTLPILRLAHFFLLNDEEDDEHPRGLTKEQIDNLSTRTYGQAS
LEGELGRACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPILAVHHD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggagacgaacggcggaggcaggcagagcgtcttcgacgggag
gaggcatactatcacttcattaatgaattgagtgaggaggagtaccgcctaatgagagac
agcaacctgcttggcacgcctggagaggttactgctgaggagctccggcaccgtcttgat
ggagcaaaagagcgcatgtcatctcagccccgtcctgagcagcgctcgcagactgctgat
tctggagaacagcagggcagcagcggtgagggagacgagagaggggctggagggagacga
ggcacagggggtacggagcccggagcagaaacttctaatggtgactcattactggagtgg
cttaacactttcagacgcactggtaatgctactcgcagtgggcagagtggcaaccagaca
tggcgtgctgtcagccggaccaaccctaacagtggagagtttcgttttagtcttgaaatc
aacatcaaccatgatcagcctgagccaggggagcataatgacactgcggacactgcagag
ctgccagtgactgccccaaacacaacttcaacctctatacgcacggcttcttctttctcc
aaccctcgcccttcaaccacgccaaggccaaccccataccccaccacccgcccagccctc
agtaggaggatgcagacacggcgtacacgcagcagcactgctactctttctatgagcccc
cctgcacttcctgcaccagtggccaccccaactgctgctccaaggagaggtgccactttg
cactctttagcaccacctcctactgttcccagtcctcctcctgatcaaactgcacctttg
caacaacaagccccgaacgcagacgtagagcagggcagtgatcaaatgtctgcctctata
aactgtccacgtgtgtcaccccagtctgtatctcaggccccagcagttggacatgaatca
cgtggcagtaggactcgatcacgtggtcgtgcacgcagggctgcagctgggggcggggtt
tcatcccgattgtcaaggcgaagccggtcccccttgcacagaatacctgctaccagtacc
actcctccatcaagtattggtatcagtggctctagcatccacactgttgagccaggcagt
ggcacaagctctgtttccatggaaacaggggaggctgtagcagaacctgcagctactaca
gagccagctgtcgagacaggagagcgcgagaatgaatcgcacgtgataggatcaggaagt
tcagcggtgcgacggcacccaaccatcatgttggacctgcaggtgagaaggattcgacct
ggtgaaaaccgcgatcgggacagcatcgccagtagaacgcgttctcgtgcccgcgttgct
gaaaatactgtcacgtttgaaagtgacagtggtggatttagacgcaccatttcccgctct
gagcgagctgggattcgcacctatgtgagcactatccggattccactgaggcgcattagt
gagacgggccttggagagcccaactccaccgccttgcgttccatcttgcgccagatcatg
accggatttggggagctgagttctctaatggagacagaggctgattctgaaactgtgtca
ccaaaccacacagatgctagtggtacaaatagtaacaccagcccaactagtcgtctgaat
tcaaatgagagtgcagctagccaggttggtacaggtgcagtagatcaggagagggtgggg
ctggtgggaagtgaagaggatcagggtggacaggccaggctcagtggtggggtagtgagc
accacagagggacgggccaccagcagagacaccaacaatctggtagagaacggcactcta
cccatcttgcggctggcacatttcttcttgctcaatgatgaggaagatgatgaacaccct
agaggcctgaccaaagagcagattgacaatctatccacacgtacctatggtcaggccagc
ctggagggggagctgggtcgtgcgtgcagtgtctgtatcaatgagtatgcccagggcaac
aagctgcgtcgcttgccctgctcccatgaattccatatccactgcatcgaccgctggctc
tctgaaaacaacacctgccccatctgtaggcagcccatactagcagtgcatcatgactga
DBGET
integrated database retrieval system
