Acanthopagrus latus (yellowfin seabream): 119009252
Help
Entry
119009252 CDS
T08233
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119009252
Pattern recognition receptors [BR:
alat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119009252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
119009252
NCBI-ProteinID:
XP_036936199
LinkDB
All DBs
Position
20:complement(17613447..17621470)
Genome browser
AA seq
1045 aa
AA seq
DB search
MRSINLSHAGCDGADDETMEQKSVSDKTDEVTRESVSSFEALVHHFHPSYIAQGGSNVVA
PNIIGCNVGNLNISISTGQESNCDTADTLQPQRDRVAECQQELKAALRRDYSHFFEGMVA
KTDKVSLNKIYTELYVTEGGSGEVNQEHEVRQIETASRIHVAQEKSIHCNHLFVPQPGRE
NRVRTVITRGVAGIGKTVSVKKFTLDWAEGKENTNLDFVFPLSFRDLNLMKEKTLSLVDL
LSEIFPQTKNTGIFVNGKNKMLFILDGLDESRLSLDFHENELMSDVTQETKVDVLLTNLI
RGKLLPWALVWITSRPVASSQIPLEHIDLVTEVRGFNNPQKDEYFRKKISDKSLADRVIK
HVKSCRSLHIMCHIPVFCWMAASVLEKKLETNDGKDMPRNLTQMYIHFLSLYADDMEKRP
LGRRGSKIDYLRNNIMSLGELAFKELEKGHLIFYESDLNQNGIDVMEASMFSGVYTEIFS
EELTLGKEKMFCFVHLSIQEFFAALYVYLRFHNDNFNVLIKKSSSSRRFPFRPASELILY
KEAVEKALRCKNGHFDIFLRFLLGLSLESNQTLLKRLMTSNKPNQKTRTEIIKHLKDKIR
ANPSPDRCLNLFHCLNELNDRSLVDEIQNYLRPDHLNRAKLSAAQWATLVFVLLTSEEEL
SVFELSSYTRSEEGLLRLLPVMKTAQAANVNACNLTVTCCANLANGISLSQLRELDLGNN
NLTDEGIKRLSGGLRSSKLETLRLRSCSLTEPSSGVLAKVISSASCCLKVLDLSDNDLLD
VGVGKLCGGLGSPHCKLEILILSLCRLTEESCIFLAAALNSSGLRELDLSYNHPGHSGLQ
LLSALRDDPRCSVEELRVEECGESRIQPGPKKYTKKLTLDPNTAHRDLSLSEGNRKATRW
TEQPYPDHPERFEFWRQVLCTEGLTGRCYWETEWSGRAFIGVAYRRMSRKGEGHDSWLGK
NESSWGLNCNSSGYRTWHRGMETAVAIQLVSNRVGVFLDWPAGKLSFFQVSGGELTLLHS
FHATFTEPVYPGFRLGWVDSTVYLC
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtatcaatctaagtcatgcaggctgcgacggagccgatgatgaaactatggag
caaaagagtgtttctgacaaaacagacgaggtcacccgagagtctgtttcctcttttgaa
gcactggttcatcatttccatcccagctacatcgctcagggtggcagcaatgtggtcgct
ccaaacatcattggttgtaacgtcggcaacctaaacatcagcatctcaacaggtcaagag
tcgaactgtgacactgcagacacgctgcaaccccaacgtgacagggttgcagaatgtcaa
caggaactgaaagctgctctgaggagggattacagtcacttttttgaggggatggtggca
aaaacagacaaggtatccctcaataagatctatactgagctgtacgtcactgagggaggg
agcggtgaagtcaaccaggagcatgaagtgagacagattgagacagcatccaggatacat
gtggcccaggagaaatcaatccactgcaatcacctctttgttcctcaaccaggacgagag
aaccgcgtaagaactgtgatcacacggggagtcgctggcatcgggaaaactgtatccgtc
aagaaattcactctagactgggctgaggggaaagaaaacaccaacctggactttgtgttt
ccgctctctttccgagatctcaatctgatgaaagagaaaactctcagtctggtggatctt
ctcagtgaaatctttcctcaaacgaaaaacacaggaatcttcgttaatggtaaaaacaaa
atgctcttcattctggatggtctggatgagagccgtctgtctctggacttccacgaaaat
gaattaatgtcagatgtgacacaggaaaccaaggttgatgtgctcctgaccaacctcatc
aggggaaagctgcttccttgggctcttgtttggatcacttctcgcccggtggcttcaagt
cagatccctctggagcacattgatctggtgacagaggtgcgagggttcaacaacccccag
aaagacgagtacttcaggaagaaaatcagtgacaagagcttagcagacagggtaattaaa
catgtgaaatcctgcaggagtcttcacatcatgtgccacattccagtcttctgttggatg
gcggcgagtgttcttgagaagaagctggaaacgaatgacggtaaagacatgccaaggaat
ctcactcagatgtacatccacttcttgtccttgtatgcggacgacatggagaagaggcct
ctgggaagaagagggtcaaaaatcgactacttgagaaataacatcatgtcactgggggaa
ctggccttcaaagagctcgagaagggccacttgatcttctatgagagcgacctcaaccag
aatggtatagacgtcatggaggcgtccatgttctcaggagtctacacagagatcttcagt
gaggagctgacactcggcaaggagaagatgttctgcttcgtgcatctgagcatccaggaa
ttctttgctgcgttgtatgtctacctcagatttcacaacgacaacttcaacgtcttgatc
aagaagtcatcctcttcgagacgtttcccattcaggcctgcatcagagctcatcctctac
aaggaagctgtggagaaggctttgcggtgcaaaaatggacattttgacatcttcctgcgc
ttccttttgggcctgtctctggagtccaatcagactctgttgaaacgtctgatgaccagc
aacaaaccaaaccaaaagacaagaacagagatcattaaacacttaaaggacaagatcagg
gcaaatccatctccagacaggtgcctcaatctctttcactgtctgaatgagctgaacgac
cgctctcttgtggacgagattcagaactacctgagaccggatcatctgaacagagccaaa
ctttcagctgcccagtgggccacactggtctttgttctgctgacatcagaggaggagctt
agtgtgtttgagctcagcagctacacccgctcagaggaaggactcctgaggctgctgcct
gtcatgaaaactgcccaagcagcaaatgtcaatgcttgtaacctcactgtgacctgctgt
gcaaacctggcgaatggcatcagcttatcccagctgagagagctggacctgggcaacaac
aacctgacagatgagggaataaagaggctctctggtggactgaggagcagcaaactggag
acactcagactgaggagctgcagcctaaccgagcccagctccggcgtcctggccaaagtt
atcagctcagcctcctgctgcctgaaagtgttggacctctctgacaacgacttgctggac
gtgggagtcggaaagctctgtggcggtctggggagtcctcactgtaaactggaaatactc
attttgtctctgtgcagactgacagaagaaagctgcattttcctggcggctgctttgaac
tcatccggtctgagagagctcgacctgagctacaaccacccgggacactcgggcctgcag
ctgctgtcagctctgcgagacgacccacggtgcagcgtggaggaactcagagtggaagag
tgtggtgagtccaggattcaaccaggtccgaagaaatacaccaaaaaactcaccctggat
ccgaacactgcacacagagacctttctctgtccgagggaaacaggaaggcgacgcgctgg
accgagcagccataccctgaccacccagagaggtttgaattctggagacaggtgttgtgc
acagagggactgactgggcgctgctactgggagacagagtggagtgggagagctttcata
ggagtcgcctacagaaggatgtccaggaagggagagggtcacgacagctggctgggcaaa
aacgaatcttcctggggactgaactgcaacagcagtggctacaggacctggcaccgaggc
atggagacggctgtagccatccagctcgtctccaacagggtgggagtctttctggactgg
ccagcagggaaactgtccttcttccaggtctccggtggggaactgacgctcctccactca
ttccacgccaccttcaccgagcccgtctacccagggttcaggctgggctgggtggactcc
acagtgtacttgtgttag
DBGET
integrated database retrieval system
