Acanthopagrus latus (yellowfin seabream): 119009307
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Entry
119009307 CDS
T08233
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119009307 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119009307 (trip12)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119009307 (trip12)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
HECT type E3
119009307 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
119009307
NCBI-ProteinID:
XP_036936310
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All DBs
Position
2:18874732..18901928
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AA seq
2058 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKANSPPESRRPNSKASKAT
ASSVTGQSRGHSSRRSGLTLSVASFVLQDEPEAAGTSEQERPGHQSKSESTRGLKRSEAP
DQISTFGPTPAKKPKSIPQPRDNTSETKKGPAKSKKRSLASEPPASSGRGQSKKSGAAGA
SPIQKRKKADSLPGLSSTAGSLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTTGTNSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKNVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLSESESFLVTSPPKACP
SGTASLCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGATTNNANSEPSRTAG
VSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCTATEQ
LNLQVDGGMECLVEISSIVSESDVSSFEIQHSGLVKQLLVYLTSNTDRDLLSRDVRLKRF
LHVFSGCPLPGMEPVGRLDPSENGPYLALVHKMNSCLSQMEQFPVKVHDFPSGNGNGSRG
SQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREED
EDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEER
ESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAPTKTSPRNAKKQ
DELWHDGVCPSVINPLETYLTSEPPETITFDDPSLEVNLLLRVLHSISRYWFYLYENAVC
KEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFYVT
AFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRA
MLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYMFSTR
GLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEMSIS
SHDLVNIDPSVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGLDF
TLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHL
QYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLF
LQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIETM
REKLLIAAREGQQSFHLS
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagtcgcaggaaggttgcagtcagagcaggtaaaa
cataaagcaaattccccacctgaaagtagaagacctaattctaaggcttccaaagccaca
gccagctcagtcactggccagtccagagggcacagctcaagaagaagcggtcttactctg
tccgtggcatcatttgtgttacaagacgagccagaagctgcagggacatctgaacaagag
cgaccaggccaccagtcaaagagtgaaagcacccgagggctgaagcgaagcgaagctcca
gaccaaattagtacttttggaccgacccctgccaagaagcccaaatcaatcccacaaccc
agagacaatacctcagagaccaagaaaggcccagctaagtccaagaagagatcacttgcg
tcagaaccacctgcatcgtcaggtcgaggccagagcaagaagagcggggccgctggggcc
tcaccgatccagaaacggaagaaagcggactctctccccggtctaagtagcaccgctggg
tccctccccaatcgtaccgagggcagaactgcaaaacccaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacggattcatcctcctctgcctccacc
tcttcctcttcctcaaccacaggcaccaacagtgccaccacgcagggtgcccgggtcaaa
caaggaaaagatcagaccaaggcacgacgctctcgctcagcctccagcccctccccacga
cgcagtactcgtgacaaggagcaggccaaaaccgccagctcttcaaaatttgagtgggca
gcccgtttcaaccccaaagtcaacctgccaaaacccaaactatccttgcccggatcctcc
aaaactgaaacctccaaacctgggccatcaggattacaagctaaattagcaagtttgagg
aaatccactaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagc
acacggcagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctaggc
aagcgcggggcagccgacgctcgccgacaggagaaaatggccgactccgacaataaccag
gatggggccaactcatcagccgctcgcactgatgaggcatcacaaggggcttcagcttcg
agctcagttgccggagcagtgggcatgaccacctctggagagagtgagtctgatgactct
gaaatgggaaggcttcaggccctactggaggccaggggtctgcctccacatcttttcggg
cctcttggacctcgcatgtcgcagctgtttcacaggaccattggcagcggagccagctcc
aaggcacagcagctactccagggcctgcaggccacaggtgacgagtctcagcagcttcaa
gcggctattgagatgtgccagctgctggtgatgggcaatgaggaaacacttggcggattc
cctgtcaagaatgtggtgcccgctttgattacactgttacaaatggagcataactttgat
attatgaatcacgcctcacgtgcactcacatatatgatggaggcgctccctcgatcctct
gctgtggtggtcgatgctattcctgtcttcctggagaagcttcaggtgatccagttcatt
gacgtagcagagcaggccctgacagccttggagatgttgtcaaggcgacacagcaaagcc
attttgcaggctggcgggctcgctgactgcctcctgtacctggagttctttagcatcaat
gctcagagaaatgcattggccattgccgcaaactgctgccagagtattactccagatgag
tttcactttgttgctgattctctgccactgttgactcagagactcacacaccaggataaa
aaatccgtcgaaagcacttgtctctgttttgccagactggtggacaactttcagcatgaa
gagaacctgctgcaggaggttgcatcacgggacctgttgaccaacattcagcagctgctg
gtagtgaccccgcctgtgctcagctcggggatgtttatcatggtggtgcgcatgttttcc
cttatgtgctctaactgcccctgcctggcagtccagctaatgaaacagaatattgcagaa
actctgcgtttcctcttgtgtggtgcttcaaacggcagttgccaggagcaaattgaactg
gtacctcggagcccccaggagctctatgaactgacctccctcatatgtgagctgatgccc
tgcctgcctagagagggcatctttgcagttgatgtaatgctgaagaagggcagtgcccag
acgacagagggagccatctggcagtggagggatgaccggggactctggcatccttacaac
cgcattgacagccgcatcattgagacagcccaccagaatggggaggatgagatcagtttg
tcaaccttgggccgtgtgtacacaattgacttcaactctatgcagcagatcaatgaagac
acaggaacggcacgcggtatccagaggaaaccaaatcctcttgccaaccccaatacaggg
agtcatcaggaggttcgtcgagaagatgcacgagcccaattgatgaaggaggaccctgag
ctggcaaagtgctttatcaaaactctgtttggggtcttgtatgaggtgtacagctcatct
gctggccctgctgtcagacacaagtgccttagagccatcctcaggatcatctactttgct
gatgcagagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcacattgcctcc
atgctatccagccaggacctgaagattgtagtgggttctctgcagatggctgagatcctc
atgcagaaactgcctgatgtcttcagtgtctacttcagaagagaaggtgtgatgcaccag
gtgaagaacctctctgaatctgagagctttcttgtcactagtcccccgaaggcttgcccc
agtggtactgccagtttgtgcacaaccaccatcagcactgcatccaccacatctgctaat
aatgcaactcctgacctgggctcacccagcttccagcacagcatggacgactctctggac
ctcagcccacaggggcgattaagcgatgtcctaaaaaggaaacggctacctaaaagaggg
cccagaaggcccaaatactctcctccaagagatgatgataaagtagacaatcaggccaag
agccctaccagtactcagtcacccaaatcttccttcttggccagtcttaatcccaagacc
tggggcaagctgggtgccacgaccaacaatgccaactcagagccctcacgtacagcgggc
gtgagtggcctggcaagggcacctcccaaggactcaatttcaaacaacagagacaaaata
aaggcctggatcaaagaacaggcaagtaagtttgtggaacgctacttcaactctgaaaat
gtggatggcagtaaccctgcactgaatgtactccagagactttgcacagccacagagcag
ctcaacctgcaggtggatggtggaatggagtgcctggtggagatctccagtattgtatca
gaatctgatgtgtcatcttttgagatccagcacagtgggctggtgaagcagctcctggtc
tacctgacctccaatacagacagggacttgctcagccgtgatgtgcggctcaagaggttc
ctccatgtgttctctggctgtccgcttccaggaatggagcctgtaggtcgtttggaccca
tcagagaatgggccgtacctggcactggtgcacaaaatgaacagctgcctgagccaaatg
gagcagttcccagttaaagtgcatgatttccccagtggcaacggcaatggcagcaggggc
tctcaggcgctgaagttcttcaacacacatcagctcaagtgtcagctgcagagacaccct
gattgcactaatgttaaacagtggaaaggcggccctgtgaagatagaccctctggccctg
gtgcaggccattgagagatatcttgttgtcagagggtacggccgaatcagagaagaggat
gaagatagtgatgatgacggttcagatgatgaaatcgatgaatcattggcggcgcagttt
ctgaattctggcagtgtgcgtcacagactacagttctacattggtgaccacctgctacca
tacaacatgacagtataccaggctgtacggcagtacagtcttcaggcggaagaagaaagg
gagtcaacggatgatgaggcaaacccactggggcgagccggcatctggaccaaaacgcac
acaatatggtataagcctgtgagagaggacgaggacggcagcaaagatgctgtgggtgga
aagaggggccgagcccagacagctcccactaaaacctcacctcgcaacgccaagaagcag
gatgagctgtggcatgatggtgtgtgtcccagtgtcatcaatcccttagagacatacctc
acttcggagccaccagagaccataacctttgatgacccctcattagaggtcaacttgctg
ctgagggtcctgcactccatcagtagatactggttctacttgtatgaaaatgctgtgtgt
aaggaaatcatccctaccagtgagttcattaacagtaagctgacagccaaagcaaaccgt
cagttacaagacccactggtcatcatgacggggaacatccctacttggctcattgagctc
ggaaagacctgccccttcttcttcccctttgacacccggcagatgttattctacgtaact
gcctttgatcgtgacagagccatgcaacgcctactggacacaaaccctgagatcaaccaa
tcagattctcaggacagcagagttgcaccacgtcttgacaggaagaagaggacgataaac
cgagatgagctgttaaaacaggccgagtctgtgatgcaggaccttggcagctccagggca
atgttggagattcagtatgagaatgaggttggcacagggcttggccccactctggagttc
tacgctctggtgtctcaggagctccagcgagccgatctcggcctgtggaggggtgaagag
gtcacactcgccaatcctaaaggaagccaagagggaactaagtacatgttcagcaccaga
ggactgtttgctgttccctttggcagaacgaccaaaccagcacacatagccaaaatcaaa
atgaagttccgtttcttaggaaagctaatggccaaagccattatggacttcagactgctg
gacctgcccctgggtctgccgttttataagtggatgctacggcatgagatgtctataagc
tcccatgacctggtgaacattgatcccagcgtggcaaagtccatccagcacttggaggat
attatacgccagaagaagaggctggaacaggaccgatcacagacgagggagaccctacag
caggcactggagagcctgaatatgaacggctgctcagtggaggacctgggtttggacttc
accctaccaggattcccaaacattgagctgaaaaagggtggcaaagacgtcccagtcaca
atctacaacctggaggagtacctcaggttggtggtgtactggactctaaatgaaggagtg
tccagacagttcgagtcattcagggaaggtttcgagtcagtcttcccgttgcatcacctg
cagtatttctatccagaagagcttgaccagttgctgtgtggcagtaaatctgagacatgg
gacgtcaagacgctgatggagtgctgtcgaccggaccacggctacacacatgacagccgt
gctgtgcgtttcctgtttgaggtgttgagcagcttcgacgctgagcagcagagactcttt
ctgcagtttgtcacagggagccccagactgcccgtcggaggtttccggagcctaaatccc
cctctgacgatcgtgaggaagacattcgagtcgacggagaacccggacgacttcctcccc
tcagtcatgacctgcgtcaactacctgaagctgcctgactattccagcatagagaccatg
cgagagaaactgttgattgcggctcgcgagggccagcagtcgttccacctttcctga
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integrated database retrieval system
