Acanthopagrus latus (yellowfin seabream): 119009497
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Entry
119009497 CDS
T08233
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
alat03037
]
119009497 (pkd2)
04040 Ion channels [BR:
alat04040
]
119009497 (pkd2)
Cilium and associated proteins [BR:
alat03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119009497 (pkd2)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119009497 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
119009497
NCBI-ProteinID:
XP_036936757
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All DBs
Position
1:complement(10898780..10908356)
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AA seq
903 aa
AA seq
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MSSSRVRPQQLPPSQAGRLPHRLDSSEGIEMENIQHQDLGLGGVIGTPSPPSRQAWSRDN
PGFEPEDEIMEADWPPASPGRRSVSTASSSSCSSGLGSYTGGGSSTHIPRGGLYPTPTVD
AQQQDRHEHRSCLKQILQKIRILWGTELMEDSDSSRERYLRNVLREMLTYIAFLITLCIL
TYGMVSANMYYYTKVMSQLFLDTPLSAGDPSTFRSLSTMEDFWRFTEGPFLNGMYWEVWY
NNKSLPENQSLIYYENILLGVPRLRQVKVRNESCSVHEDLRDEVQDCYNIYTPANEDTAP
FGPKNGTAWVYATESEMNGTSYWGQVSKYGGGGYYQDLSRTKEGSAIQLQSLKDHLWLDR
GTRAVFLDFSVYNGNINLFCITRLLVEFPATGGAVTSWQFQTVRLIRYVSSWDYFVGLCE
VAFCLFILYYVVEEVLEIRIHRLHYFKCLWNCLDILILVLSVVAIIMNVTRTAIVGNLLK
GLLENHNAHPSFEFLANLQVQFNNVAAIIIFFSWVKLFKFINFNKTMSQLSSTMSRCAKD
LVGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASIFTQFRIILGDFEFSEIEEANPVL
GPVYFTTFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLIKKGCNKALMKLR
LKKTAVDDISDSLRQAGGKLNFDELRQDLKGKGHTDAEIQAIFAKYDQDGDPDLTEHEHQ
QMRDDLEKEREDLDLERNSLTRPNSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSY
EEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEGMERAKLKRRDVLGRLLDGVMEDERLGR
DTDAHREQMERLVREELERWESDDMVSQVSHPQPATPVGPRPRPSSSMSADGLDTSTNGG
SHV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcccgagtcagaccgcagcagctaccgccgagccaagctggcaggctgccg
cacagactggactcaagcgaagggatagagatggagaacatccagcaccaggacctgggt
ctcgggggagtcataggcaccccgtcccctccgtccagacaggcgtggagtcgggataac
ccggggttcgagcccgaggacgagatcatggaagccgactggcctccagcgagtcccggg
aggaggtcggtgtccacggcctccagcagcagctgcagcagcggcctgggcagctacacc
ggcgggggcagcagcacccacatcccccgaggaggactgtacccgaccccgactgtggat
gcccagcagcaggacaggcatgagcaccgcagctgtctgaagcagatcctccagaagatc
agaattctgtggggcacagagctgatggaggacagcgacagcagtcgagagaggtacctc
aggaacgtactgcgagagatgctcacctatatcgcattcctcatcaccctttgtatcttg
acctatgggatggtgagtgccaatatgtactactataccaaagtcatgtctcagcttttc
ctggacacaccgctgtctgcaggggacccgtcaactttcagaagcctctcaaccatggag
gatttctggaggttcacagagggacctttcctcaatgggatgtactgggaggtgtggtac
aacaacaagagcctgccagagaatcagagtctcatttactacgagaacatcctccttgga
gtgccccggctccgacaggtcaaagtccgcaacgagtcctgttccgtccacgaagatctg
agagacgaggtccaggactgctacaacatatacaccccagccaacgaggacactgccccc
tttggccccaagaatggaactgcgtgggtgtatgcaacagagagcgagatgaacgggacc
agttattggggtcaggtgtctaaatatggaggtggaggatactaccaagacctgtctcgt
acaaaggaagggtcggcgatccaactgcagtccctcaaagaccacctgtggctggacaga
ggcaccagagctgtgttcctcgacttctccgtctacaacgggaacatcaacctcttctgc
atcaccaggttgttggtggagttccctgctaccggtggggcagtgacctcctggcagttt
cagacagtgcgcctcatacggtatgtgtccagctgggactactttgtgggtctgtgtgag
gtggcattctgcctcttcatcctgtactacgtggtggaggaggtgctggagatccgcatc
caccggctgcattacttcaagtgcctgtggaactgtctggatattctcatacttgtgctg
agtgttgttgctattatcatgaacgtaaccagaacagccattgttggaaatctgctcaaa
ggcctattggagaaccacaatgctcaccctagcttcgagtttttggccaacctgcaggtc
cagttcaacaacgtggccgcgatcatcatctttttttcctgggtcaagcttttcaagttc
atcaacttcaataagaccatgagtcagctctccagcactatgtctcgctgtgccaaggac
cttgtgggttttgccatcatgtttttcatcatcttcctggcttacgcacagctagcctat
ttggtgtttggaacccaggtcaacgatttcagcactttccaggccagcattttcacgcag
ttccgtatcattctgggagactttgagttctcagaaatagaggaggcgaatcccgtgctc
ggacccgtctactttacaacctttgtcttcttcattttctttatcctcatgaacatgttc
ctggccatcatcaatgacacatactctgaggtgaaggctgacatgtcccagcagaggtct
gagatggaaatgactgatctcattaagaagggttgtaacaaagccttgatgaagttgaga
ctgaagaagacggcagtagacgacatctccgacagtctgcgtcaggccggcggcaaactg
aactttgacgaactccgccaggatctgaaaggaaagggccacacagatgctgagattcag
gccatctttgcgaagtacgatcaggatggtgatccggatctgacggagcatgaacaccag
caaatgagagacgacctggagaaagagagagaggacttggatctggaacgcaattcgctg
actagacccaacagtgggcggagcttcccgcgcacccaggacgactcggaggaagacgat
gacgaggacagtggccacagctctcgacgtcgcggcagcagctcagggggcgtctcctac
gaagagtttcaagtgctggtgagacgtgtggacaggatggagcactctatcggcagcata
gtgtccaagatcgacgccgtgatcgtgaagctggaaggcatggagagggccaaactgaag
aggagagacgtgctgggccggctgctggatggagtcatggaggatgagcgtctgggacgg
gacacagacgcccacagggagcagatggagaggctggtgagggaggaactggagcgctgg
gagtccgacgatatggtctcgcaggtcagccacccacagccggccactcctgtcggcccc
cggccccgtccatcctcttccatgtccgccgacggcctcgacacaagcacaaacgggggc
agccatgtgtga
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