Acanthopagrus latus (yellowfin seabream): 119009558
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Entry
119009558 CDS
T08233
Symbol
psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8 isoform X1
KO
K03066
26S proteasome regulatory subunit T6
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
119009558 (psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
alat03051
]
119009558 (psmc5)
Proteasome [BR:
alat03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
119009558 (psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_22
AAA_16
AAA_lid_PRS2_C
PRS7_OB
nSTAND3
RuvB_N
TIP49
AAA_18
AAA_3
AAA_28
Mg_chelatase
NPHP3_N
AAA_33
AAA_14
Parvo_NS1
ATPase
AAA_17
IstB_IS21
PhoH
AAA_24
AAA_7
DUF815
AAA_25
FapA
Sigma54_activat
bpMoxR
DUF5906
RNA_helicase
ABC_tran
AAA_11
Zeta_toxin
DivIC
AAA_19
TsaE
APG6_N
HR1
Motif
Other DBs
NCBI-GeneID:
119009558
NCBI-ProteinID:
XP_036936835
LinkDB
All DBs
Position
20:12147153..12151298
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AA seq
406 aa
AA seq
DB search
MEVDGIDHMEMGDSKGGSGLRQYYLSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacggaattgatcatatggagatgggggacagtaaaggtggctcaggtctc
cggcagtactacttgtcaaagattgaagagttacagttgacggtgaacgataagagccag
aatctcagacgtctgcaggcacagaggaatgagctcaacgccaaagtgcgcctccttcgt
gaggagctgcagttactacaggagcaggggtcctacgtaggagaggtggttcgggtcatg
gacaagaagaaagtgctggttaaggtgcatccagaaggaaaatttgtcgtggatgtggac
aagaacattgacatcaacgatgtgactccaaattgccgcgtggctctgcgtaatgacagc
tacaccctgcacaagatcctgcccaacaaggtggaccctctggtgtccctcatgatggtg
gagaaggtgccggactccacctacgaaatgatcggcggcctggataagcagatcaaggag
atcaaggaagtgatcgagctgcctgtcaagcacccagagctgtttgaggctctaggcatt
gcccagcccaagggtgtgctgctgtacggtcccccgggtacagggaaaaccctgctggcc
agagctgtggcccaccacactgactgcaccttcatcagggtgtcgggctctgagctggtc
cagaagttcatcggagagggtgcccgtatggtgcgcgagctctttgtcatggctagggaa
cacgctccctccatcatcttcatggacgagatcgactccattggctcatcccgcctggag
ggtggctcgggtggtgacagcgaggtgcagaggacgatgctggagctgctcaatcagctg
gacggctttgaggcaaccaagaacatcaaggtcatcatggccaccaaccgtattgacatc
cttgactcggctcttctcaggccaggcagaatcgacaggaagatcgagtttccccctccc
aatgaagaggcccgtcttgacatcctgaagatccactccaggaagatgaaccttacacgt
ggcattaatctgaggaagatcgcagagctgatgcctggagcctctggtgctgaggttaag
ggtgtctgcacagaggcagggatgtacgctctgagagaaaggagagttcatgtcacccag
gaggactttgagatggctgtggcaaaggtgatgcagaaagacagcgagaagaacatgtcg
atcaagaagctgtggaagtaa
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