KEGG   Acanthopagrus latus (yellowfin seabream): 119009905
Entry
119009905         CDS       T08233                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:alat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:alat03037]
    119009905 (ift140)
Cilium and associated proteins [BR:alat03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   119009905 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR19_1st ANAPC4_WD40 WDR55 TPR_IFT80_172 Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR90_POC16_2nd TPR_COPA_B WD40_Prp19 TPR_GEMI5 Beta-prop_CAF1B_HIR1 Clathrin TPR_2 RNase_HII TPR_12 Beta-prop_ELP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_RSE1_2nd WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 119009905
NCBI-ProteinID: XP_036937529
LinkDB
Position
20:10318810..10342346
AA seq 1445 aa
MAVYFDHRIEAPGSSGVPSQLTWHPALPVLAVASSSPTTGGNVDLYLQQGEYVESCHLER
PYQPTVLRWHPTKPLLALGWENGEVVLLTHPSGDQTGLPSTHTACITLLEWSGSGSRLVT
GDQNGALAVWKVDARGRLQSNHLVKHDYNKPLTCCVFRPASPGDDVAKLARASVSGDESA
LDMFSWKGAPLKMGPQEGLAFYVSTADGKVHGVDEFCKTSTLLSVEGAIKKLFYLEKREA
LAVITETMMLSQYTLGPEGGAQEFMKVKLSSKTGQNVDIVWTGNSLLITATGEHVIRLWD
LERDDNYVLQLDETLGFERGEMINCVSHCAGKEILAAGTSHGRIALWRMVVQPGSNRGDT
KAQWKLQTPTEIQGNVVQLQWGSSLNLLAANNSNTVLILCEHVMSAHFSQQVAAVQLTPT
QLSVTQFSTGAHLALQSDMHIKGVCVTKDSVTVWSGKQITVYELSGTVLRNTGSFPCDSH
IVAVHGENLYTVEPNRVQIRTPQGTVKQLLTFSKAEGNPVLLSVCQSYLVVGTDTAHIRV
FDLSRRDAKAHCSAKNLTDQIANLGALSSVKCNANGSQVSILISQVNGRPDHKVYFYDVE
MDTVTHFDFFIGRPSSGISQHEESERQQFQETELSGRCPVSHFWDESEPRLFVCETVPIS
SESSSTNFLDTTDVSVVTLFCTQEHGLLLQDCYPKPSGLQALLALDVPYYCFSCKLGERD
PGLPEISTSSVPPQPPRGSVAQFPHMVSRRALRDFVGLENCEKATRDAMLNFSFYLTIGD
MDEAFKSIKLIKSKAVWENMARMCVKTRRLDVARVCLGNMGNARAAKALKEAEAEPEPEA
QVAMLAIQLGMLEDAEKLYRSCQRYDLLNNFYQASGQWEQALETAENRDRIHLRTTYYNY
AKYLESMGDKTRALAYYENSDTHRVEVPRMLQDDTPSLEIYVNKMKDKNIYKWWAQYLES
QSDMDSALRYYECAQDYLSLVRVHCYMGNIQKASEIANDTGDRAASYHLARHYEGHDDIK
QAVHFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNPEDMMEAACYYEEKGTHMDRAVEL
YHKAGYVSKALELAFATQQFAILQMIAEDLNENSDPAILARCSDFFITHSQYDKAVELLV
AAKKYNQALELCVTQNLTITEELAERMTVTDSKDLSEEARKELLERIADCCMRQGNYHLA
TKKYTQAGNKLKAMRALLKSGDTEKIVFFANVSRQKELFIMAANYLQSLDWRNNPEILKT
IIGFYTKGRALDLLAGFYEACAQVEIDDYQNYEKALDALTEAFKCVSKAKDSSGGQQEAR
LADLQHKITLIKKFVHARRLYTEDAGEAVRLCEALLEEPELDPAVRIGDAFGFLVEHHCQ
QGNFQVAYRKLEELQKLLPSQNVRYYVSQASLEALQKEIGIPMERGERRQSLKGEDEVEE
DLNVS
NT seq 4338 nt   +upstreamnt  +downstreamnt
atggcggtgtactttgaccaccgtattgaggcccctgggagcagtggtgtgccctctcag
ttgacctggcaccctgctcttcctgtcctggccgtggcctcaagcagccccaccactgga
ggcaatgtggacctctacctgcagcagggagagtatgtggagagctgccatttggagcgt
ccttaccagcccacagtgctgcgctggcatcccacaaagccactgctggcactaggatgg
gagaatggagaggtagtgctgctgacacacccctcaggagatcaaacaggtcttcccagc
acacacacggcctgcatcacattgctggagtggagtggatctggcagccggttggtaact
ggtgatcaaaatggagcgcttgcagtatggaaggtagatgccagaggaagacttcaaagt
aaccaccttgtgaagcatgattacaacaaacctctgacttgctgcgtcttcagaccagcc
tcacctggggatgatgtagcaaagctagcccgggcatcagtgagtggagatgagagcgct
ctggacatgttcagctggaagggcgcacctctgaagatgggcccacaggagggccttgca
ttctacgtcagcactgcagatggaaaggtccacggtgtggatgaattttgcaagacaagc
actcttctcagtgtggagggtgcaataaagaaactcttctaccttgagaaaagagaggca
cttgctgtgatcacagagaccatgatgttgtcacagtacactctcggaccagagggagga
gcccaggaatttatgaaggtcaagttgagcagcaagaccgggcagaacgtagacattgtc
tggacaggcaacagcctcctcatcacagcaacaggggaacatgtcatcaggctgtgggac
ctggagcgagatgacaactatgtattacagctcgacgagactctggggtttgagagagga
gagatgatcaactgtgtttcacactgtgctggaaaagaaatcttggcagctggtaccagt
catgggcgcatagcattgtggaggatggtggtgcagcctggcagcaacagaggtgacacc
aaggcccagtggaagcttcagacgcccacagagatacagggaaatgttgttcagctacag
tggggctctagcctgaacctgctggcggccaacaactcaaacacagtgctgatcctgtgt
gagcatgtgatgtcagcccatttcagccagcaggtggcagcagtgcagctcactccgacc
cagctcagcgtcactcagttcagcacaggagctcaccttgctctgcagtctgacatgcac
atcaagggagtgtgtgttaccaaggattcagtgacagtctggagtggcaagcagatcact
gtgtatgagctctcagggacagttcttcgcaatacaggatcctttccttgtgattcgcac
attgtagctgtgcatggagagaacctctacactgtggaacctaacagggtccagattcgt
acgccacagggcactgtgaagcagctactgaccttctccaaggcagagggcaaccctgta
ctactcagtgtgtgtcagtcctacctggtggtaggcactgacacagcgcacatcagagtc
tttgacctctcccgaagagatgccaaagctcactgcagtgctaagaacctgactgaccag
attgctaatctgggagcgttgagctcagtcaaatgtaacgccaacggcagccaagtcagc
atcctaatctctcaggttaatggacgacctgatcacaaagtgtacttctatgacgtcgag
atggacactgtgacacactttgacttcttcattggcagaccgtcgagtggtatctcacag
cacgaagaaagtgaaagacagcagtttcaagagacagagctcagcggtcgctgcccggtt
tctcacttctgggacgagagtgaacctcgtctttttgtttgcgagacggtgccgatcagc
tctgaatcctcatcaactaacttcctggatacgacggacgtgtcagtggtgacgctcttt
tgtacgcaggagcacgggctcctgctgcaggactgctatcctaaaccttcaggcctgcag
gcgctcctcgctctggatgtgccctactattgtttcagctgtaagctgggtgagagagat
ccagggttaccagagatttccacatcatctgtgcctccccagccgccgagggggtctgtt
gcccagttcccccacatggtgtccaggcgagctctcagagactttgtgggcctggagaac
tgcgagaaggccacccgcgacgccatgctcaacttcagcttttacctgaccatcggcgat
atggacgaagccttcaagtccatcaagctcatcaagagtaaagcggtatgggaaaacatg
gcacggatgtgtgtgaaaacccgccggctggatgtggcacgtgtgtgccttgggaatatg
ggaaatgccagggcagcgaaagctctgaaggaggcggaggctgagccggagccagaagcc
caagtggccatgttggccattcagctcggcatgctggaagatgcagagaagttgtacagg
tcctgtcaacgctacgacctgctgaacaatttctatcaggcttctggccaatgggagcaa
gctctggaaacagctgagaaccgcgaccgcatccatctacgcaccacctactacaattat
gccaaatatctggagtccatgggcgacaagactcgtgccctggcatattatgagaattca
gacacacacagggtcgaagtgcccagaatgctgcaggatgacacgccgtctctagagatc
tacgttaacaaaatgaaagacaagaacatctataagtggtgggctcagtacctggagagc
cagtcagacatggattcagctctgcgttactatgaatgtgcccaggattacctctccctt
gttcgagtccactgttacatggggaacattcagaaggcatctgagatagccaatgacaca
ggtgacagggcagcgtcataccacctggccagacattacgagggccatgatgacatcaaa
caggccgtccacttctacacacgagcccaggcctacaacaatgctatacgcctttgtaag
gagaatggtctggacgaccagctgatgaacctggctctgctcagcaacccagaggacatg
atggaggctgcctgttactatgaggagaaaggaacccacatggaccgagctgtcgagctc
taccacaaggctggatatgtctccaaagctctggagctggcctttgcaacgcaacaattc
gctattcttcaaatgatcgcagaggatctgaacgagaactctgacccagccatcctggca
cgctgctctgacttcttcatcacacattcccagtatgataaggctgtggagttactggta
gcagccaagaagtacaatcaagccctggagttgtgtgtgacccagaacttgaccatcaca
gaggaacttgcggagaggatgactgtgacagattcaaaagacttatctgaagaggcccgg
aaggagctgctggagaggatagctgactgctgcatgcgccagggcaattaccacctggct
accaagaaatacacacaagcgggcaacaagctcaaggccatgagggcactcctgaagtca
ggcgacaccgagaaaatcgtattctttgccaatgtttctcgccagaaggagcttttcatc
atggctgccaactacctccagtccctggactggcggaataatccggagatcttgaagaca
atcattggtttctacactaaaggcagggcactggacctgcttgctggcttctatgaagcc
tgtgctcaggtggagattgatgattaccagaactatgaaaaggctctagatgctttgact
gaggctttcaagtgcgtctcaaaagcaaaggactcttcaggtggacagcaagaagcaaga
ctggctgacctgcagcacaaaatcaccctaatcaagaagtttgtccacgcacgcaggttg
tacacagaggatgctggtgaagctgtacggttatgtgaagccctgctggaggagccagag
ttggaccctgctgtcaggattggagacgcatttggtttccttgtggagcaccactgtcag
caaggcaactttcaagtggcctaccgtaagctggaggagcttcagaagcttttgccatcg
cagaatgtccggtactatgtcagccaggccagcctcgaggccctgcaaaaagagatcggt
atccctatggaacgtggtgaacgcaggcaaagtctgaagggagaggatgaagtggaggag
gacttaaatgtgtcttaa

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