Acanthopagrus latus (yellowfin seabream): 119010011
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Entry
119010011 CDS
T08233
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03013
Nucleocytoplasmic transport
alat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119010011
03015 mRNA surveillance pathway
119010011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119010011
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119010011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
RAP1
Motif
Other DBs
NCBI-GeneID:
119010011
NCBI-ProteinID:
XP_036937709
LinkDB
All DBs
Position
20:complement(6172683..6178003)
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AA seq
275 aa
AA seq
DB search
MAPSPTKRKEDDKGKQRGKEKSGSTKEGADKGRGREKNRTRRSASSRSSRSSSSSSSSSG
SSSGSSSGSSSSASSHSGSSSSRSSSSSSSSSSPSPSRQRHNNRRRSRSKSKSAKKDDRD
RRRRSPTPKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPMNRVHPHLSKGYAYVEF
ETPEEAEKALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMWRRTPPRM
RRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttccccaactaagaggaaggaagatgacaagggcaaacagagaggtaaggag
aagtccggatccacgaaagaaggagctgacaaaggccggggccgagagaagaaccgcacg
cgacgcagtgcttccagtcggagcagcaggtccagttccagctccagcagcagctcaggc
tccagttcgggctcctccagtggctccagctcctctgcctccagccactcaggctcgtcc
agctcccgctcctcttcctcctcctcttcatcctcttcaccgagccccagccgccagcgc
cacaacaacagacgacgttcacggtccaagtcaaaatcagcaaagaaggatgacagagac
cggcgacgtagaagccccacaccaaaacccacaaaggtctacctgggccggctaaccaga
aatgttataaaggaacatattcaggagatcttctccacctatggcaagatcaagatgatc
gacatgcccatgaaccgcgtccatcctcatttgtccaaaggctacgcctatgtggagttt
gagaccccagaggaggcggagaaggccctgaaacacatggacggaggtcaaatcgatggt
caggagatcacggtcacagctgtgctgacacccacagtgcgccctcccccccgcaggctg
tcccctccccgcaggatgcctcctccaccacccatgtggagacgcactccacctcgaatg
aggagaaggtctcggtctccacggcgacgctctccagtgcgtcgcaggtctcggtcacct
ggccggcgccgtcaccggtcacgctctagttccaactcctcccgctag
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