Acanthopagrus latus (yellowfin seabream): 119010417
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Entry
119010417 CDS
T08233
Symbol
lrit1b
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1b
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alat04990
]
119010417 (lrit1b)
Domain-containing proteins not elsewhere classified [BR:
alat04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119010417 (lrit1b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
119010417
NCBI-ProteinID:
XP_036938446
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All DBs
Position
20:complement(15968641..15978546)
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AA seq
652 aa
AA seq
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MSRHLAAAFCLALVFLPMLCSSCPSQCSCFFHKLSDGSKARSVLCNDPEITVVPPNFPSD
TSKLRIEKTAITRISVDNFHYLNNLEFLWMSFNSLISLSVDSFRGLYNLDELRLDGNTLT
SFPWESLTDMPNLRLLDLHNNKISVVPAEATVYIKNLTYLDLSSNSLTTVPADVLTMWLS
VKPSQDADSSKLILGLHDNPWLCDCRLYDLVQFQKSPSSSVALIDTRLRCSDPESLSGVL
FTESELQRCQGPRVHTAVARVRSSLGNNVLLRCGTVGVPIPELSWSRADGKKINGTVQEE
ISKEGIIWSILSVPAVSYRDSGKYVCKATNFVGTADAIISLVITDSFRSEEAGGGSSKRN
RGKKPGGIGRAAYQEKLIARYVPPPPSTAAQPIIEPLNGKGVTGKYEIESYSVSDDTSQG
RGKVSDLQKSVEVERDALSNLAANASSLQQAPEKRVVRSVKVIGDTDHTVSLNWRAPTAT
NTTEFSILYAIFGERDMRRINVGAGRNRITIDGLVPKTKYIACVCVKGLIPKKEQCVIFS
TDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCQKMLGRESKEIQDSYVTF
ETLGPAAKAKGMEGEYLTRLNPDESNRLLSARSSVDSEATARTEGPPNEYFC
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacatctcgctgctgcgttttgtctggctttagtttttcttcccatgctgtgc
agctcctgtccttcacagtgcagctgcttcttccacaagttgagtgatggatcaaaagca
aggagtgtgctttgcaacgatccagagatcactgtggtccctccaaatttcccatccgac
acgtcgaagcttcgcatcgaaaagactgcgatcacacggatttcggtggacaacttccac
tacctcaacaacctggagtttctctggatgtcttttaattcactgatctcactgagcgtc
gacagcttccggggtctttacaacctggacgagctccggctggatggcaacaccctcacc
tccttcccctgggagtctctgaccgacatgccgaacctgaggctcctcgacctgcacaac
aacaagatctccgtcgtccctgccgaggccaccgtgtacatcaagaatctcacctatctg
gacttatccagcaacagtctgacgaccgttcccgctgacgttctcacaatgtggctgagc
gtgaagccatcccaggacgccgattcctccaaactaattctcggtcttcatgacaacccg
tggctgtgtgactgccggctctacgatctggtacagtttcagaagtccccatcatcctcc
gtggctctcatcgacaccaggctgaggtgttctgatccggagagcttgtcaggggttctt
ttcaccgaatcagagctgcagaggtgccagggccctcgggtgcacactgccgtggctcgt
gtacgaagctcactgggcaacaacgtgctgctgcgctgtggcacggtgggagtccccatc
ccagagctctcctggagccgtgccgatggcaaaaaaatcaacggcacagtccaggaagag
atttcaaaggagggcatcatttggtctattctgagcgtgcctgcagtttcctatcgagat
tctgggaaatacgtgtgcaaagcgaccaacttcgtcggcactgcagacgccatcatctct
ttggtgatcacagattcctttcggtcagaggaagcaggtggcggcagttctaagagaaac
agagggaagaaacctggtggcattggtagagcagcataccaggagaagctcatcgccaga
tatgttcctccgcccccatccactgccgcccagcccatcatcgaacctctcaatggcaaa
ggagtgactgggaagtatgagattgagagctacagcgtgtctgacgacacttctcaagga
cgagggaaggtgtcagaccttcagaagtcagtggaggtggagcgagatgctctgagtaac
ttggcagccaatgcctcgtccttacagcaagctccggagaaaagggtggtgcgctcagtg
aaggtgatcggtgacaccgaccatactgtgtctctgaactggcgagcccctacagccaca
aacaccacagagttcagcatcctgtacgctatatttggtgagagggacatgcgtcggatc
aacgtaggggccgggaggaaccgtatcactattgatggcctcgtgccaaagacaaagtac
attgcttgtgtttgcgtcaaaggcctgatcccgaaaaaagagcagtgtgtaatcttctca
actgatgaggcggccagcgctagcggcacgcagaagctcattaatgtggtggtgataaca
gtagcctgcgtgattgctgtccccctgacactgatcgtgtgctgcggggcgctaaagaag
cgctgccaaaagatgcttgggagggaatctaaggaaatacaggactcgtacgttacgttt
gaaaccctcggccccgcggccaaagctaaaggcatggagggcgagtatctgaccaggcta
aatcctgatgaatccaacaggctgctctcggcgaggtccagtgttgactcagaggccacg
gccaggactgaggggccacctaacgagtatttctgctag
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