Acanthopagrus latus (yellowfin seabream): 119010734
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Entry
119010734 CDS
T08233
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119010734 (chd7)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119010734 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
119010734
NCBI-ProteinID:
XP_036939018
LinkDB
All DBs
Position
21:904236..979680
Genome browser
AA seq
3314 aa
AA seq
DB search
MADPGMLSLFGDDAGLFSDGLDGLGDCFPQQPTPAQSNPLAQQTNPSLNHEHQGNRGFHQ
GMIHGTGPGPGQPKLGQMYDHGPFTGYDQPGAPGGRMMAQNGPSQAAPNVNTAMNGMASH
YHNNPANASNPHHGYPGDATGAGGGGAGGVWGQQQQNRSAYQQPPAQPGGGPNQMGGYQM
SQGNYGGMQGPPTSTAARMNQHYPPQSMAPPSAQDASHYLGHVGIGGAQMRQPPPQQQPQ
GYPNMGHTSRYPPSPSRQPPHPHQHQQGMGGFGGGQYPGYQGQYAAMGPGMGQGASANVN
ANTSQAMGPGQIGQRFNQGSGQGAGQQGQRYPPGPPHQSQPHQTHSVPLQQQAGQQGQPM
HPLNHPQNLPQSQNQPQSHLAPPSQGSYPSPSSMSPMRVMGTPTPPPQQGRPPSAGVTGT
PEVAGYTSMQSPPNALAHPQRTPQTPLSTQHQQPHSLPPNAGQMYPGIGLQRGPQLGPSR
PQIQQQQGPHEAPVSQTGEQRHLQPQQQASRSGQPQQPTPMGFQGPTTTQHGVQAPSQGL
APPAQNAQTQHTHLPPQHLAPTPNQAPHPWASLPPASHLVSSPPLTPQKVPHIQHSPTDP
SGDASMMVPDRLPVGTGAPGQPISTEHPSDQETKPKKKRKKKAKVVDKEEEEGGKKAEGE
EGKSEIPGTGSDTGQQATGTGIVEGNSTPLEEKKKRKKKPKEKTEPKEPKTPKTPKTPRT
PKEPKEKKTKSSKTKTPKKTSSKKVEVEGGASIAKKDPKRKRECSVSDDVEVKSPPPSPP
EDEDDDGVQKRRSSRQVKRKRYTEDLEFRISDDDDSANDSPAPKSPSQQAEAEGPVVEKI
MGLRTAKKQLESGNEVEVEEFYVKFKGFSYLHCRWADLEELEKDKRIHQKVKRFRAKQQL
NSFITEMDDEPFNPDYVEVDRVLDVSESTDENGETVTLYLVKWCSLPYEDSTWELKSDID
QSKIEEYEHIAARTPNTKRVDRPPAADWKKLEGSRDYRNSNALREYQLEGLNWLTFNWYN
SRNCILADEMGLGKTIQSITFLYEIYMKGIQGPFLVIAPLSTIPNWEREFRTWTELNAVV
YHGSQASRKTIQAYEMYYREAQGKIIKGVYRFHAVITTFEMILTDCPELRSVPWRCVVID
EAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSEQTFMTE
FGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKN
FTFLSKGGTGGGGGGGGGGGGGGSSVPNLLNTMMELRKCCNHPYLINGAEEKIAEEFRDS
HGTDVADMALQAMIQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYP
YERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN
DLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENANSGV
QQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTITIESEGKGSTFAKA
SFVATGNRTDISLEDPDFWQKWAKKAELDLDAINGRNTLVIDTPRVRKQTRHYSSVKEDE
MLEFSELESEDDEPSKPSSKPRRPQDKTQGYPRSECFRVEKNLLVYGWGRWSDILAHGRF
KRPLKEVDVETICRALLAYCLLHYRGDENIKSFIWDLIAPSEDGTTKTLTNHSGLSTPVP
RGRKGKKGKPQAPPPQTPRADWLHSCNPDHLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQ
EVIGDQAERILEGADSSELDIWIPQPFHAEVPADWWDSNADKALLIGVFKHGYEKYNSMR
ADPTLCFLEKVGMPDAKAIAAEQRGSDMMADGVEGEDEDPEYKPLRMPFKDDMDDFTNSP
LDDKDETVEGEAEAKSGENGQSVPTVDGASGSNERLYWPAASALTARLRRLITAYQRSNR
REQLRQEALNRPDGRRRRRREFLPSITMVTDTGGGAAYIQDAPGVFMAEGNPYLAKGGAY
FAKGGQFMAEASPVITASTLMADGAMYYKERRQRWTRREEADFYRVVSTFGVVFDTQCQK
FDWTQFRAFARLDKKTDESLEKYYFSFIAMCKRVCRMQVKTETELPDPTLIIDPITEERA
SRTLYRIELLRRIREQVLPHPQLSERLKLCQPSPDLPEWWECGRHDQDLLLGASKHGVSR
TDYHILNDPALAFLEAHQRFTNQPGVGVCVGAQGEIRKAGMGAAESTPTAVLTPAELESA
ATAAKIAVKAVKEEEGEGKEVKTEEGKPEMEEKMDTEGGDANDIPCTKSETADEPKANQE
EVREGKDETTASAKEEVKTEEEIHPKVEKEEQEETEEENSTEREKTSKPADDQVKDFTEE
KPLPCESSVHQKEMKAELPEHHETSPEAQPGNKTTEEEDREGKENPESPKSLKSADTEKS
PEEQDEERMDEDDKSEKSSQPETSAVLEQKNFDEESMASVSTSTQNETRDGFCPEDMPET
STLQALQERSYGFSFWPKDRVMINRMDNICEAVLKGKWPVNRRHIFDFPSNLLPGHGSTV
TAATVATATESPLQRRSLAQLTMAGIHTPYSGSEDKTQSPQVHEDALSLTVPRQRRRRRR
KIEIEAERAAKRRNLMEMVAQLRETHAASESQSQAIDLTKGVHHHHKASPSLTGFPSALV
TSPSLKAQMDLLQQASPSAHRANGSMEADLPIMRRRRGRRKNVEGMELLFMGNKRAGGDD
PEETKMSGVEGVQGPARAQRPLTVLEQGPSARSRASSSVEEEGPAVSNKELGEWLRRHPT
YTMDMAGFTPKSEDLLLSQFAKPKQKRHRCRNPNKIDINTLTGEERVPVVNRRNGRKMGG
AMAPPMKDLPRWLLENPEFSIAPDWTEIVKQSGFLPEAMFDRLLTGPVVREEGVRRRGRR
PKSEIAKAAAAAQAAAAQAAQASLASAASSAGGINPLLLNSLFGGMDLSSLQSLQSLQLA
AGLMAFPPPTDPKQAAASAAAAASMLPLMLPGMGGLPNMAAALPNMFSLGGLFGGSLTTA
ATAQSNSAVAIASGNTNGTMEGESDETVKAKKKREGEEKEDGENCEEEQEESVEEGEVKK
SKKKKEGAAEKMEKSVNNAAAAPQIPAADSSAEANINGDAAALLAAAGMSANSLAFNPFL
LSTMAPGLLYPSMFLPPALGGLSLPGFPTATTLAELQSAMAGALGGNIMTMNPQREEKKG
GTKATGAEEEEGEEEEEEEEEEEEEEEGGESDLAEEKEGEVEEETRGEVSALEDGGEEEE
EEEKAASPQKDESD
NT seq
9945 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccctgggatgttgagtttatttggggacgatgcagggctgttctcagatgga
ttagatggtttaggagactgctttcctcagcagcctactcctgcccagtccaacccgctg
gcccagcagactaatccctctctaaaccacgagcaccagggaaaccgaggttttcaccag
gggatgatccatggcactgggcctggcccagggcagcctaaattggggcagatgtacgat
cacggccccttcaccggctatgatcaacctggtgccccgggaggacgcatgatggctcag
aatggtcccagccaggcggcaccaaacgtgaacacagccatgaatggcatggcttcccac
taccataataacccagctaacgctagcaacccccatcatgggtacccaggtgatgctaca
ggagcagggggtgggggtgcaggtggcgtttggggccagcagcaacagaacagatcagct
tatcagcagcctccagcacaaccaggaggtggccccaaccagatggggggttaccagatg
tctcaaggcaactatggtggaatgcagggcccacctacatccacagcagctcgcatgaac
caacactaccctccacagagcatggcacccccctctgctcaggatgcatctcactacctg
ggacatgttggaattgggggggcccaaatgagacagccgccaccacagcagcaaccccag
ggctatcccaacatgggccatacatccagatacccaccctccccttcccgacagcctcca
cacccccaccagcaccaacagggcatgggggggtttggtggtggccaatacccaggctat
cagggccagtatgcagccatgggacctgggatgggccagggtgctagtgcaaatgttaat
gctaacaccagccaggccatgggaccagggcaaattggccagaggtttaaccagggatca
ggccagggagctgggcaacaggggcagcgatatccccctggaccaccacaccaatcacag
ccccatcagacccattctgtccctcttcagcagcaggcagggcagcagggccagcctatg
caccccctaaaccacccccagaatctgccccagtctcagaaccagccccagtcccacctt
gcccccccatctcagggatcttacccctccccctcatccatgtcccccatgcgggtaatg
ggaaccccaactcctcctccccaacagggcagacctcctagtgcaggagtaactggaacc
ccagaggttgcaggatacacatccatgcagtctccacccaatgctttggcccatccacag
agaactccccaaactcctctgtccacccaacaccagcagccccacagcctgccccctaat
gcaggacagatgtatcctggcatcgggctgcagcgtggtccacaattgggtccaagcagg
cctcagatccagcagcagcaagggcctcatgaagctccagtcagccagactggagaacag
cgtcatctccagccccagcagcaggcctctcgaagcgggcagccccagcagcccactccc
atgggtttccagggtccaactaccactcaacatggtgttcaagccccaagccagggccta
gcaccaccagcccagaatgctcagacgcagcacacacacctgcccccccaacaccttgcc
cctaccccaaaccaggccccccacccatgggcgtctctgccaccagcctcccatctagtc
tcctcaccccctcttactccacagaaagtgcctcacatacagcattcccccactgacccg
tcaggcgatgcctcaatgatggttcctgacaggctgccagtcggcactggtgcccccggc
cagcctatcagcacagagcatcccagcgaccaggagaccaagccaaaaaagaagaggaag
aagaaggcaaaagtagtggacaaagaggaagaagagggaggaaagaaggctgaaggagag
gaaggcaagtctgaaattcctgggacaggaagtgatacgggtcaacaggctactggtaca
ggaattgtagaggggaattcaacacccttggaggagaagaaaaaacgaaaaaagaaacca
aaggagaagacggagcccaaggagcccaagacgcccaagacacccaaaacaccaaggacc
cccaaagagcccaaggagaagaaaaccaagagttccaagaccaagacccccaagaaaacc
agcagtaagaaggttgaggttgagggcggagctagcattgctaagaaggatcccaagagg
aagagagagtgctctgtcagcgatgatgtggaggtgaagtctccacccccctcacctcct
gaagatgaagatgatgatggtgtacagaagcgtcgttccagccgtcaggtgaagagaaag
aggtacacagaggatctggagttcaggatctcagacgacgatgacagcgccaacgactca
ccagcacctaagtccccttcacaacaggctgaggctgaggggcctgttgtggagaagatc
atgggcctgcgcactgcaaagaaacagctggagtcagggaatgaagtggaggtggaggag
ttctatgtcaagttcaagggcttttcgtatctccactgtcgctgggcagatctggaggag
ctggagaaggacaagagaatacaccagaaggtcaagaggtttagggccaagcaacaactc
aacagcttcataactgagatggatgatgagccttttaacccggactatgttgaggttgac
cgtgtcctggacgtctcagagagcacagatgaaaacggagagacggtgactttgtatttg
gtgaagtggtgcagtctgccttacgaagactccacctgggagctgaagtccgacatcgac
cagtccaagatagaggaatatgaacacatcgcagcacgcacacccaacactaagagagtg
gatcggccgccagcagctgactggaaaaagctggaaggctccagggattacaggaacagc
aacgcactcagggaataccagctggagggcctcaactggcttaccttcaactggtacaac
tcacgtaactgtatcttggccgatgagatgggtctaggaaagaccatccagtccattaca
ttcctctatgagatttacatgaagggcattcaggggccattcctggtcattgccccactt
tccaccatcccaaactgggagagggagttcaggacctggaccgagctcaatgcagtggtc
tatcacggcagccaggccagccgcaagaccatccaggcctacgagatgtactacagagag
gcacagggtaaaataattaagggagtgtatcggttccacgcggtcataacgacctttgag
atgattctgactgactgtccagagcttcgcagcgtgccatggcgctgtgtggtgatagat
gaggcccaccgcctcaaaaaccgaaactgcaaactactggaaggactcaagatgatggac
atggagcacaaagttctgttgacaggaactcctctccagaacacggtggaggagctcttc
agcttacttaacttcctggagcctgagcggttcccatctgaacagacattcatgactgaa
tttggagaccttaagactgaagaacaggttcagaaactgcaaggtattctgaagcccatg
atgttgagaagactgaaggaggacgtggaaaaaaatctggcccctaaagaagagaccatc
attgaggtggagctgaccaacatccagaagaaatactatcgggccattttggagaagaat
ttcaccttcctgtccaaaggaggcacaggaggaggcggcggtggaggaggtggaggaggc
ggcggaggatccagtgtccccaacctcctcaacaccatgatggagctgaggaaatgctgc
aaccacccctacctcattaatggagcagaggagaagatcgcagaggagttcagggactcc
cacgggacagacgtagcagatatggcactccaagccatgatccaggccgctggcaagctg
gtgctcattgacaagctgctgcccaaactgaaggctggcggacacagagtcctggtgttc
agtcagatggtccgttgtctggacatcctggaggactacctcatccagaaacgatatcca
tatgaacgtattgacggcagagttcgtggtaacctgcgccaggcagccatcgatcgcttc
tccagaccagattcagaccgctttgtcttcctgctatgtacaagagctggaggactgggt
atcaacctgactgcagcagatacctgcatcatctttgactctgactggaatcctcagaat
gacctgcaggctcaggccaggtgtcatcgtattggccagtccaaggcggtcaagatctac
cgtctgatcaccaggaacagctacgagagggagatgtttgacaaggccagtcttaagctg
gggctcgacaaggccgtgcttcagagcatgagtggacgagagaatgccaatagtggggtc
caacaattgtccaagaaggagatcgaggaccttctaagaaagggagcgtatggagctctg
atggatgaagaagacgaaggctccaaattctgtgaggaagacatcgaccagatcctccag
agacgaacacacaccatcaccattgagtctgagggcaagggctccacctttgctaaggcc
agttttgttgcaacaggtaaccggacagacatttctcttgaggatccagacttctggcag
aaatgggccaagaaggccgagctggacctggatgccattaacggacggaacacactggtg
attgacacaccaagggtgaggaagcagacacggcactacagcagcgtcaaagaggacgag
atgctggagttctctgagctggagagcgaagacgacgagccaagcaaaccatcttccaaa
ccacgacgaccccaagacaaaacccagggctaccctcgatctgaatgcttcagagtggag
aagaacctgctggtctacgggtggggtaggtggagtgacatcctcgctcatggtcgcttc
aagcgccccctgaaggaggtggatgtggaaacgatctgccgagccctccttgcctattgc
ctgctgcattaccgtggcgatgagaacatcaagagcttcatctgggaccttatcgcccca
agtgaagatgggaccaccaagacgctgacaaaccactctggtctctctaccccagtccct
cgaggcaggaagggcaagaaggggaagccccaggccccacctccacagactccacgagct
gattggctgcacagctgcaatcctgaccacttgctgcaagaggatagctacaagagacac
ctcaaacatcactgtaacaaggtgctgctgagggtaaggatgctgtattatctgcgacag
gaagtaatcggtgaccaggctgagcgcatcctggaaggagctgactccagtgagctggat
atctggatcccccagccattccatgccgaggtcccagctgactggtgggacagcaacgca
gataaagccctgctcatcggtgtcttcaaacacggctatgagaagtacaactcgatgcga
gctgaccccaccctgtgtttcttggagaaggtgggcatgccagacgccaaggctatcgcc
gctgagcagaggggttccgacatgatggcagatggcgtcgagggtgaggatgaggatcca
gagtacaaacccctgcggatgcctttcaaagatgatatggatgacttcaccaattctcca
ctggatgacaaagatgaaacggtggaaggtgaagccgaagctaaatccggtgaaaacggt
caaagtgtgcccactgtagatggagcttcaggctccaacgagcgtctgtattggccagca
gcctcagctctgactgcccgtctgcgtcgactcatcacggcctaccagcgctccaaccgc
agagagcagctccgtcaagaggccctcaaccggcccgatggtcgcaggcgacgacgcagg
gaattcctgccttccatcaccatggttacagatacaggaggaggggcagcatacatccaa
gatgcaccaggagtgttcatggcagaaggaaacccatatctggctaaaggaggtgcttac
tttgccaaaggtgggcagttcatggcagaggcatcaccagtgattactgccagcactctg
atggctgatggagccatgtactacaaggagagaagacaaagatggactcgtcgcgaggag
gctgatttctaccgtgtggtgtccaccttcggagtcgtctttgacacccagtgccagaaa
tttgactggacacagtttagagcctttgctcgactcgacaagaaaacggatgagagcttg
gagaaatattacttctcattcattgccatgtgtaaacgtgtctgcagaatgcaggtcaag
actgaaacagaacttcctgaccctactctgatcattgaccccatcacggaggagcgtgct
tctcgtacactgtaccgcatcgagctgctccgccgcatccgagagcaggttctccctcat
ccgcagctctctgagcgtctcaagctctgccagccctcccctgatctcccagagtggtgg
gagtgtggccgccatgaccaggacctcctcctgggagcctctaagcatggtgtaagccgg
acagattatcacattttaaacgaccctgctttagcctttctggaggcacaccagcgcttt
accaatcagccaggggttggggtttgcgtgggagcccagggagagatccgaaaagctggg
atgggggcagcagaaagtacccctacagccgtcctcacccccgcagagctggaaagtgca
gccactgctgctaagattgctgttaaagcagttaaagaggaggagggagaagggaaggag
gtgaaaactgaggaagggaagccagagatggaggagaaaatggatacagagggaggagat
gccaacgacattccatgtaccaagtctgaaactgctgatgaaccaaaggcaaatcaggaa
gaggttagagaagggaaagacgaaaccactgcttcagcgaaggaggaggtgaagacagaa
gaagagatccatcccaaagtagaaaaagaggagcaggaagagactgaagaggagaatagt
acagaaagagagaagacttccaagccagcggatgaccaagtcaaagactttacagaagag
aaacctcttccctgtgagtcttctgtgcaccagaaagagatgaaggctgagctcccagaa
catcatgaaacctctcctgaagcacagccaggcaacaagactacagaggaggaagacaga
gaagggaaggagaaccctgagtctcctaaatctctcaagtcagctgacacagaaaaaagc
ccagaggaacaagatgaagagaggatggatgaggatgacaagtcggagaaatcctcccag
cctgaaacgagtgctgttttagagcagaagaactttgatgaggagagtatggcatctgtg
agcacatcgacccaaaacgaaaccagagatgggttctgtcccgaagacatgccggaaacg
tctacactgcaggccttacaggagcgctcctatggtttctctttctggcctaaggatcga
gtgatgatcaacaggatggataacatctgcgaggccgtccttaaaggcaagtggcctgtc
aacagacgccacatctttgacttccccagcaacttgttgccaggacatggctccacggta
accgcagcgaccgtagccacggcgactgagagcccactgcagagacggagcctggcccag
ctgacgatggctggcatccatacaccctacagtgggagtgaagataaaacacaatcccca
caggttcatgaggatgctctgagcctgacggtacctcgacagaggaggaggaggaggagg
aagattgagatcgaggcggagagggcagccaagagacgtaacttgatggagatggtggct
cagctgagagagacccatgctgcttcagaatcccagagccaggcgatagacctcaccaag
ggtgtgcatcatcaccacaaggcctctccctcattaactggctttcccagtgccctggtg
acaagcccctccctcaaagctcagatggacttgttgcagcaagcctcaccctctgcacac
agagccaatggttcaatggaggctgacctgccaatcatgaggcgaaggcggggccgcagg
aaaaatgtagagggcatggaactgctgttcatgggcaacaagagagcaggaggggatgat
cctgaggagacaaagatgtcaggggttgagggtgttcagggtcctgcccgtgcccagaga
cccctcaccgtcctcgagcagggccccagtgccagatctcgggcctccagcagtgtagag
gaggaagggccagcagtttctaataaagagctgggagagtggctgagacggcacccaaca
tacaccatggacatggctggatttacaccaaagagtgaggacttactgctgtctcagttt
gctaagcccaaacagaagcgtcaccgctgtcgaaaccccaacaagattgacatcaacacc
ctgactggagaagagagggtgcctgtggtcaacagacgcaatggacgcaagatggggggg
gccatggctccaccaatgaaagatcttcccagatggttgctggagaatccagagttttct
attgcccctgattggacagagattgtcaaacagtcgggtttcctcccagaagccatgttc
gaccgccttctgactggtcctgtagtaagggaggagggtgtccgtcgtcggggacgacga
cccaaatctgagattgccaaggcggcggccgctgcccaggcagcagcagctcaggctgcc
caggcatcactggcctctgctgcttcatctgcaggaggcatcaaccctctgctgctgaac
agtctgttcggagggatggacctgtcgtcccttcagagcctccagtctctccagttggct
gctggtctgatggccttccctccacccactgaccccaagcaggctgctgcaagcgccgcc
gccgccgcctccatgctgcccctcatgctgcccggcatgggaggcctgcccaacatggct
gccgccctccccaatatgttcagcctaggtggactgtttggtggtagcttgacgacagcc
gctacagcacaatccaactcagctgtcgccattgcatcaggaaacaccaatggaacaatg
gaaggagagagtgacgagacagtgaaggcaaagaagaagagagagggagaggaaaaagag
gatggagaaaattgtgaggaggagcaggaggagtctgtggaggagggagaagtgaagaag
tcaaaaaagaagaaggagggagcagcagagaaaatggagaaatcagttaataatgccgct
gcagctccccagatcccagctgctgattcatcagctgaggcaaacatcaacggtgatgca
gcagccctgttagctgcagccggcatgtctgccaattctctagcattcaacccattcctc
ctctccaccatggctccaggccttctctacccctccatgttcctacctccagccctcggg
gggctcagcctgcctggcttccccaccgccaccaccctcgccgagctgcaaagcgccatg
gccggtgcgctggggggcaacatcatgaccatgaacccccagagagaagagaaaaaagga
ggaacgaaagctacaggagcggaggaggaggagggggaggaggaggaggaggaagaagag
gaagaggaggaggaggaagaaggtggagagagtgacttggctgaggaaaaggagggtgaa
gtggaggaggagacaagaggtgaggtttcagccctggaggatggaggagaggaggaggag
gaggaggagaaggcagcgtctccacagaaggacgagagtgactga
DBGET
integrated database retrieval system
