Acanthopagrus latus (yellowfin seabream): 119010875
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Entry
119010875 CDS
T08233
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119010875 (vps53)
Membrane trafficking [BR:
alat04131
]
Protein recycling
Others
EARP complex
119010875 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
119010875 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
hAT-like_RNase-H
Syndetin_C
Laminin_II
VPS51_Exo84_N
Sec8_N
NBD94
COG5_N
Motif
Other DBs
NCBI-GeneID:
119010875
NCBI-ProteinID:
XP_036939334
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All DBs
Position
2:complement(16327791..16353000)
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AA seq
831 aa
AA seq
DB search
MMEEEEFEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWSMTERIAVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDIPGKKRPESPLEPTNPFLEDESSEDVGTEKDEDLAKPRKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTISSLLKEKEGSEA
AKFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKILMERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRS
EQSSMLELFRQRLPTPPSGGDGGPSLSFSTPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaagagtttgagtttgcggaggatttggaggctattttgcatcttaca
cccgaggtgcagctagccattgaacaggttttccccagtcaagatcccctggacagagca
gacttcaatgctgtggaatacatcaacacactgttccccaccgagcagtctttggcaaat
atcgacgatgtggttaacaagattcggctgaagattcgacgcctggatgacaacatcagg
actgtggtgcgtgggcagaccaacgtgggccaggatggcagacaggctttggaagaggcc
cagatcgccatccagcagctctttggcaaaatcaaagacatcaaggacaaggcagagaag
tctgaacaaatggtcaaggagattacgagggacataaagcagttggaccatgccaagcgc
cacctcactacatccatcaccaccctcaaccacttgcatatgttggcaggaggtgtcgac
tctttagaagccatgaccagaaagaggcagtacggtgaggtggccaacctgctgcaggga
gtcgtcaatgtgcttgaacatttccacaagtacatgggcataccgcagatcagacagctt
tctgagagagtaaaagcagcacagagtgagttagggactcagatcctggcagattttgaa
gaggccttcccctctcagggctccaagagaccaggtggccctagtaatgtgctgagagac
gcctgcctggtggccaacgtgctggacccacgcatcaaacaggaaatcatcaaaaagttc
atcaggcagcacctctcagagtacctggtgttattccaggaaaaccaagatgttgcatgg
ctggacaagatcgatcggcgctacgcctggattaaacgccaacttgtagactatgaggag
aagtatggacgcatgtttcctgaggagtggagcatgacggagcgtattgctgtggagttc
tgccacatcaccagggtggagctagccaaagtaatgcgaacacgggccaaggagattgag
gtgaagctgcttctgtttgccatccagaggaccacaaacttcgagggtcttctggctaaa
cgcttcacaggatgcaccttgactgacatacctggaaagaagaggccagagagccctcta
gaacccaccaaccccttcttggaggatgagtcaagtgaagatgtgggcacagagaaggac
gaggatctggctaagcccaggaagccgaaagctccggacaaccctttccacggcattgtc
tccaagtgctttgagcctcatctatatgtctacatagagtcccaagacaagaacctgggc
gagctgattgaccggttcgtggctgacttccgagctcaaggcccacccaaggcgggcaca
gaggagggcggagcggtgctgcccagttgtgctgacctctttgtctattacaagaagtgc
atggtgcagtgctcccagctgagtactggagaaccaatgattgccctcacaaccatcttc
cagaaattcctaagagagtatgcttggaagatcctctctggaaacctgcctaaatcgagc
agtaacagcgggggtctcaccatcagcagtctgctgaaggagaaggaaggttcagaagcc
gcgaagttcactgtagacgagctctgcctgatctgcagcatcctcagcactgcagagtac
tgcctggctacaacacaacagttggaagagaagctaaaggagaaagtagataaaatcttg
atggagagaattaatttgactggggagatggatacattcagcactgtgatctcaaacagc
atccagctattagttcaagatctcgatgctgcctgtgaccctgctctcaccgccatgagc
aagatgccgtggcagagtgtggagcatgttggtgaccagagtccttatgtcacgtcaatc
atcatgcacattaagcaaaacgtgcctatcatcagagacaatctggcgtccacgcgcaaa
tacttcacacaattctgcatcaagttcacaaattctttcattcctaaatttatcaaccac
ctgttcagatgtaagcctattagcatggtgggagctgaacaactcctccttgacactcac
tccctgaagacagtcttgctggatctgccctccataggctcccaggtgctccgcaaagca
cctgccagctacactaagatagtggtgaaaggcatgacccgtgcagagatgatcctgaag
gtggtgatggccccacatgaaccaccagtggtgtttgttgataactacatcaagctcctg
gcggatgggaatcctgagaccttccagaagattctagacatgaagggtctgaagcgcagc
gaacagagcagcatgctggaactcttcaggcagaggctgcccaccccaccctccgggggc
gacggcggcccctctctctccttcagcacccccacccctgaacaggagtcctcccgcatc
cgcaaactagagaagctcatcaagaagagactgtga
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