Acanthopagrus latus (yellowfin seabream): 119010965
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Entry
119010965 CDS
T08233
Symbol
rnf220a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220a isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119010965 (rnf220a)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119010965 (rnf220a)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119010965 (rnf220a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
119010965
NCBI-ProteinID:
XP_036939518
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All DBs
Position
21:5353044..5509258
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AA seq
708 aa
AA seq
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MDLHRAAFKMESSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSVEKDVHL
PFNNGSYTFASMYHRQGAVPPGFPNRDFPPSLLHLHHQFAPPNLDCSPISMLNHSGVGAF
RPFASPPDDRDGAPGGYQSAFTPAKRLKGCLDAEASPHLRYSDAEGKEYDFGGSQIPPGG
SPSSALKAVEDSGKKIFAVSGLLSDRETSSSPEDRIERFSPVYEGKKKMSLYDSQAPICP
ICQVLLRPGELQEHMETEIERLTAICLSSKNPSPKDGAATPGTPKSMLLSVHIKREGESP
VVSPLSSEDIHHSDRYQTFLRVRANRQTRLNDSPARIGKMKRRKPEEGGQVCPLCSAPLA
GSEEEMSRHVEQCLIQREGALGDDDSADMDGENGRGFEEYEWAGQKRIRATALLEGGFRG
TGFATCSIKESAADSDADLDVDGDDTLEYGKAQYTEADIIPCSGAGEDQGEAREREALRG
AVLNGGMPSNRITPEFSKWANDEMPSTSNGESSKTDPSTPSSSCSSSCVPRTCKNSEIEK
VTEEESTATTMEALKARIRELERQILRGDRYKCLICMRKPAIQSGAEIKSLGAWPGPRPL
ANEVGERQPKSLPLGLYCLYRGLVIGGYGSGIKRLLPQPLRRVAGSVAPQAALLSGSVAV
GCVVPWTPTRCHSPPSSAGTSIVKNAGSGLWGTRSCARSATPSPHLET
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggacctccacagggcagccttcaagatggagagctcctcctacctgcccaatcccctg
gcatccccagccctcatggtcctggcttccactgctgaagcctctcgggatgcctccatt
ccctgccagcagccacgtccatttggcgtcccagtatctgttgagaaagatgtccatttg
ccattcaacaatggttcttacacttttgcatcaatgtaccaccgccaaggtgcagtccca
ccaggattccctaacagggattttcctccatccctcctccacctccatcatcagtttgcc
ccacctaacctagactgctcaccaatcagcatgctgaatcacagcggcgtcggcgccttc
aggcctttcgcttcccctccggacgatcgggatggggcaccgggtggctatcagtctgct
ttcaccccagccaagcgcctcaaaggctgcctggatgcagaggcttccccccacctgcgg
tactctgatgcagaggggaaagagtacgactttggcggttcccagatccctcctggaggc
tcacccagcagtgccttgaaagcagtggaggacagtgggaagaagatcttcgcggtgtca
ggcctcctgtctgatcgagagacatcctccagccctgaggaccgcattgagcgcttctct
cctgtttatgaaggtaaaaagaagatgtctctgtacgacagccaggctccaatctgtccc
atctgccaggtgctgctcaggcccggagagctccaggaacacatggagacagagattgag
cggctaactgccatatgcctcagcagtaagaacccctcacccaaggatggagcagccact
ccaggaacccccaagtcaatgctgttgtcggtgcacataaagcgcgagggagagtctccc
gtggtctcacccttgtcctctgaagacatccaccactccgacagataccagacattttta
cgagttcgagcaaacagacaaacaagattgaatgactccccagcccgtatagggaagatg
aagaggaggaagcctgaggaggggggccaggtatgtccgctgtgcagtgcccccttggct
gggagcgaggaggagatgagtagacatgtggaacaatgcctgatccagcgtgagggtgcg
ttaggtgatgatgattctgcagacatggatggagagaatgggcggggctttgaagagtat
gagtgggcggggcagaagaggatcagagctaccgctttgctggagggaggcttcagagga
acaggttttgccacgtgtagcatcaaggagagcgcggcagatagcgacgctgacctagat
gtggacggagacgacacgttggagtacggcaaggcccagtacaccgaggctgatataatc
ccctgctctggagctggagaggaccaaggagaagccagggagagagaggcgttacgggga
gccgtgctcaacggtgggatgccttcaaacagaataacgcctgaattctctaaatgggcc
aacgacgagatgccttcaacgagcaatggagaaagcagcaagacagaccccagcactcct
tcatcatcctgttcttcctcctgcgtcccacgcacctgtaaaaacagcgagatcgaaaag
gtaacagaggaggaatccacggctaccaccatggaggctctgaaggctcgaatcagagag
ctggagaggcaaatactgagaggagatcgatacaagtgtctcatctgcatgaggaagcct
gctatccagtcaggcgcggagatcaagagcctaggggcgtggccagggccccggccactg
gccaatgaggtcggagagaggcagcctaagtccctccccctcggcctgtactgcctgtac
aggggccttgtgattggtggttacggcagcggcataaagaggctcctcccacagccccta
cggagggttgccggttcagttgccccccaagctgccttgctcagtggttctgtggctgtt
ggctgtgtcgttccatggactcctacacgatgccactcacctccatccagtgctggcacg
tccattgtgaagaatgctggctcaggactctggggaacaagaagctgtgcccgcagtgca
acaccatcacctcacctggagacctga
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