Acanthopagrus latus (yellowfin seabream): 119010983
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Entry
119010983 CDS
T08233
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03030
DNA replication
alat03420
Nucleotide excision repair
alat03430
Mismatch repair
alat03440
Homologous recombination
alat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119010983 (rpa1)
03420 Nucleotide excision repair
119010983 (rpa1)
03430 Mismatch repair
119010983 (rpa1)
03440 Homologous recombination
119010983 (rpa1)
03460 Fanconi anemia pathway
119010983 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119010983 (rpa1)
03032 DNA replication proteins [BR:
alat03032
]
119010983 (rpa1)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119010983 (rpa1)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119010983 (rpa1)
DNA replication proteins [BR:
alat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119010983 (rpa1)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119010983 (rpa1)
MMR (mismatch excision repair)
119010983 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
119010983 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
119010983
NCBI-ProteinID:
XP_036939586
LinkDB
All DBs
Position
2:9147600..9175098
Genome browser
AA seq
601 aa
AA seq
DB search
MTKLTEGAIEALSNGGGGSDVVLQVANIRKIDGGNGPPRYRVMMSDGRHTLSSFMLSTQL
NYMADENKLVPNCICLLKRHVTNTLKDGRRVVIILEMDVLKPAEDVAGRIGDPIPYTEGQ
GKGPQAAPNPEPRPPLQQQNRNETVNRGFSKDFGKKAPSAMPSTPGGSSKAVPIASLNPY
QSKWTIRARVTNKSSIRTWSNSRGDGKLFSMEIVDESGEIRVTGFNQEVDKYFSLIEVGK
VYYISKGSLKIANKQYTSVKNDYEMTLNGETSIIPCEDSSDVPMVQCDFVSIGDLGNREK
DAIIDVIGVCKGVDEVTRLTTKTNKEVSKRTLSLMDMSGKVVTVTLWGEEAEKFDGSGQP
IVAVKGAKLSDFGGRSLSASFSSTVMINPDIPEAYKLRGWYDKEGHTMEGESLTEMKGGS
GGGNTNWKTLSDVKTEHLGHGDKADYYTCIATIVYLRKENCLYQACPSQDCNKKVVDQQN
GMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLKDSNE
AAFDEVFQQANFNTFVFRSRVKLETYNDESRIKATVMEVKPVDHKDYSKRLIMNIRKLAA
Q
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcttacagagggcgcgatagaggctctatcaaatggcggtggtggcagcgac
gtagtgcttcaggtggcgaatattcgcaagattgacggaggaaatggtccacctcgctat
cgagtgatgatgagtgatgggcggcacactctgtcctctttcatgctctcaactcagcta
aattacatggctgatgagaacaaactggtcccaaactgcatctgcctactgaagaggcat
gtgacgaatacactgaaggatggacgacgggtggtaatcattttggaaatggatgtcctg
aagcccgctgaagatgtagctggaagaataggcgaccccattccttacactgagggtcag
ggtaagggcccacaggcagcgccaaaccctgaaccccgccctcccctgcagcagcaaaac
aggaatgagacagtgaacagaggtttcagtaaagactttgggaagaaggctccatctgcc
atgcccagtactccagggggaagttccaaagcagtgcccatcgccagcctcaacccctac
cagtccaagtggaccatccgtgcacgtgtaaccaacaagagcagcatccgcacatggagc
aactctcgtggtgatggcaaactcttctccatggagattgtggatgagagtggagaaatc
cgagtgactggtttcaaccaagaggtggacaagtacttcagccttattgaggttggcaag
gtctactacatctccaagggctccctgaagatcgccaacaagcagtacacctcagtgaag
aatgactatgagatgacactcaatggagagaccagcattattccctgcgaggacagctct
gatgttcccatggtgcagtgtgacttcgtctcaatcggtgatctggggaacagagaaaaa
gatgctattattgatgtgattggagtctgtaagggtgtggatgaagtgacccgcctcacc
actaagaccaacaaagaagtgtctaagaggacgctcagtctgatggacatgtctgggaaa
gtggtgaccgtcacactgtggggagaggaagctgaaaagtttgatggctctggacagccc
attgtagcagttaagggtgcaaaactttctgactttggaggccggtccctctctgcatcc
ttcagcagcactgtgatgatcaacccagacatccctgaggcatataagctcagaggctgg
tatgacaaggagggtcacaccatggaaggagagtctctgacagagatgaaaggtggcagt
ggcggtggaaacacaaactggaagactctatctgacgttaagacggagcacctgggacac
ggagacaaggcggactactacacctgcattgctaccatagtgtacctgcgcaaggaaaac
tgcctttaccaggcctgtcccagccaagactgcaacaagaaagtggttgaccaacagaac
ggcatgttccgctgtgagaagtgcgacaaagaattccccaacttcaagtatcgccttatc
ctttctgccaacattgcagattatggggacaaccagtgggtgacttgcttccaggagagt
gcagaggccatcctgggccagaatgcagcttacctggggcagctcaaggactcgaatgaa
gctgcctttgacgaggtcttccagcaagccaacttcaacacgtttgtcttccgcagcaga
gtgaagttagaaacgtataacgatgaatccaggatcaaggccacagtgatggaggtgaag
cctgttgaccacaaggactacagcaagaggttgatcatgaacataaggaaattggcggcc
cagtag
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