Acanthopagrus latus (yellowfin seabream): 119011086
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Entry
119011086 CDS
T08233
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119011086 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119011086 (smg7)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119011086 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
119011086 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
2H-SAK
Motif
Other DBs
NCBI-GeneID:
119011086
NCBI-ProteinID:
XP_036939803
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All DBs
Position
21:27685325..27702434
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AA seq
1190 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQSGTGAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIRAFIKFHGHVYLSKSLDKLDALREKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDLTADSSEQSYSSEQQISWFQLLGLFMSFLGVMCSRALLNKNRGEEIMGECP
LPAIKVSLDWLKLRPSVFHEAAVDKRQYVWPWLVSILNSFQPKEDDVSCSSVTPLPEEFE
LQGFLALRPALRTLDFTKGHQGILVDRDGLPLHTRHQRLVSLGKWVADNQPRLVQCRVSE
DGLLVFITDIPEQAIEEPQEKEAPVLQESSNGEQTPNDGGNSGLKSVLSAGKTQSSWPDG
SDRPVVTFKENIKPREQSREPTRNHHLKDSGKERRDFSKGNGAAGKGELKRDGKRKSELK
KAAHEKSTDAGKQVKAQTELRKTPVSEAKKTPVTQTQTTCSSQFIPIHHPGAFPPLPSRP
GFPPSAYVIPPPVAFPGLQVNPGFTFSTGVSVPGPFLQPGVHTQAGSQAGKQSHIPYSQQ
RPSGPGPGQGPGSSGPSQGQQPQTQPPSQQALQQSVQLQVQVMSQQQQSPTKPVQQVGMG
KSPPHHPGLQQYMQVQDQPAQMWNQAQAALQKISPMQMSMKQPQQPQQQQAFYMAAQDPL
KLYEHQLQPQQQLSNMDKKMKYPNVKMQDFYWEPSYRIGDGLAVMADRMKRPPPGGICPE
QDPSSGPRGPPFEDNKSSPLLPPDLLKTLADFEEEEELVFSKPPDFFQALAGPLSTAPGP
NIFLPNQTRMESGPEVVSQSSSLLPISGFPMQEYNQNSIFSQAYGKNLPPSSKPDAPMMH
QEPSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHGAMPFSNFGPI
GTPDSRDRRVVDRWKADKTGAVSGFGLDYLPAAASSAASDTSWHQAGPTGSSWTNQESPM
EESSSTVLLDSLKSIWSSSMMQPGPSALEQLLLQQKQKQQRGHGAMNPPH
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccaatatctccgacaggcagaggccctgaaggctgacatgacagac
tctaagctcggggcggcagaggtgtggacgtcccggcaggccctgcaggacctgtaccag
aagatgctggtgacggacctcgagtacgccctggacaagaaagtggagcaggacctgtgg
aatcatgcttttaagaaccaaatcaccacactgcagagccaggccaagaaccgagccaac
cccaaccgcagcgaggtccaggccaacctgtcgctgttcctggaggctgccagtgggttc
tacacacagctgctgcaggagctgtgcaccgtgtttaatgtggacctgccgtgtcgcgtc
aagtcgtctcagctcggcatcatcagcaataaacagagcggcactggcgccatcgtgacg
ccgcagcccagctcctgctcctacatctgccagcactgcctcgtccacctcggagacatc
gcacgttaccgcaaccagacgagccaggcggaatcgtactacagacacgcagctcagctg
gtgccatcaaacggtcagccctacaaccagctggccatcctggcgtcctccaaaggagac
cacctcaccaccatcttctactactgccgcagcatcgcagtcaagttccccttcccagca
gcctccaccaacctgcagaaggcgctgtccaaggctctggagagccgcgatgaggtaaaa
accaaatggagcgtgtcggacttcatccgggccttcatcaagtttcacggtcacgtctac
ctgagcaagagtctcgacaagctggacgctctgagggagaaactggaggagcagtttcag
aggctgatcttgcagaaagccttcagctctcagcagctcgtccacatcaccgtcatcaac
ctgttcgagctgcaccacctcagagacctgacagccgacagcagcgagcagagctacagc
agcgagcagcagatcagctggttccagctgctcggactcttcatgtccttcctgggcgtc
atgtgcagtcgagctctgctcaacaagaaccgtggagaggagatcatgggggagtgtcct
ctgcccgccatcaaagtgtctctggactggctcaaactgagacccagcgtcttccacgag
gctgctgtcgacaagaggcagtacgtctggccatggctcgtctccatcctcaacagcttc
cagcccaaagaggacgacgtgtcctgttcctcagtgacgcccctgccagaggaatttgag
ctgcagggtttcttggcgctgcggcccgctctgaggactctggacttcactaaaggtcat
cagggcatcctggtggacagggacggtctgccgctccacactcgacatcagaggctcgtc
agtctgggcaaatgggtggctgacaaccagccgaggctcgtccagtgtagagtgagtgag
gacggcctgctcgtattcatcactgacattccagagcaggccatcgaggagccgcaggag
aaggaggcgccggtgctgcaggagtcatccaatggcgagcagacgcccaacgacggtggg
aactccggtctgaagtcagtgctgtcggcggggaagacgcagagttcgtggccagatggc
agcgaccgacccgtcgtcacgttcaaggagaacatcaaacccagagaacagagccgcgag
cccacacggaaccaccacctgaaggacagcggcaaagagcggcgagacttcagcaaaggc
aacggggctgctgggaaaggagagctgaagagagacgggaagaggaagagcgagctgaag
aaagctgctcatgagaagagtaccgacgctggcaaacaggtgaaggctcagacggagctc
aggaagactccggtgtccgaggcgaagaagacgccggtcactcaaactcaaaccacctgc
tcctcccagttcatccccatccaccatcctggagctttcccaccactgcccagcaggcca
ggtttccctccctctgcctatgtgatcccgcccccagtggcgttcccaggccttcaggtg
aatccgggcttcactttctccactggagtgtccgttcccggacctttcctccagccgggt
gtccacacgcaggccggctctcaggccgggaagcagtcccacattccctacagtcagcag
aggccctctggtcccggtccaggtcagggacctgggtcctcgggcccctcccagggtcag
cagccccagacacagccgccttcccagcaggccttgcagcagtcagtccagctgcaggtt
caggtgatgagtcagcagcagcagtctcccaccaaaccggtccagcaggtcgggatgggg
aagagcccgcctcaccacccggggctgcagcagtacatgcaggtccaggatcagccggct
cagatgtggaaccaggctcaggctgctctgcagaagatttctcccatgcagatgtccatg
aagcagccgcagcagcctcagcagcagcaggccttctacatggcggctcaggatcctctc
aagctgtacgagcaccagctgcagcctcagcagcagctctccaacatggacaagaagatg
aaataccccaacgtaaagatgcaggacttctattgggagccgtcctacaggataggggac
ggcctggctgtgatggcagacaggatgaagaggccgcctccaggtgggatctgtcctgaa
caggacccctcctctgggccccgcggacccccatttgaggacaacaagagctcgcctctt
ctacctcctgacctgttaaaaacgctagcagattttgaggaggaggaggagctcgtcttt
tctaagcctcctgatttcttccaggccttggctggccctcttagcactgctcctggacca
aacatatttctgccaaaccagaccaggatggagagcggacccgaggtcgtcagccaatcc
tcttctctcctgcccatctctggcttccccatgcaggagtacaatcagaacagcatcttc
agtcaggcctacggcaagaacctgccgcccagctccaagcccgatgctcccatgatgcac
caggagccatccctctactccctgttcgaggggactccctggtccccctccctgcctgcc
agctcagatcactccaccccggccagccaatcccctcactcctccaaccccagcagcctg
ccgtcctcccccccgacacacaaccacggagccatgcccttctccaacttcgggcccatt
ggcactccggacagccgggaccgcagggtcgtggaccgctggaaggccgacaagactggt
gcggtcagcgggttcggactggactacctgccggctgcagcctcctctgcagcttcagac
accagctggcaccaggccggaccgaccggcagctcctggaccaatcaggagtctccgatg
gaggagtcgtcctccaccgtgctgctcgacagcctcaagtcgatctggtcgagctccatg
atgcagccgggcccgtcggcgctggagcagctcctcctgcagcagaaacagaagcagcag
cgaggtcacggcgccatgaacccgcctcactga
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