Acanthopagrus latus (yellowfin seabream): 119011316
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Entry
119011316 CDS
T08233
Name
(RefSeq) tiggy-winkle hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119011316
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119011316
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
alat00536
]
119011316
Peptidases and inhibitors [BR:
alat01002
]
Cysteine peptidases
Family C46: hedgehog family
119011316
Glycosaminoglycan binding proteins [BR:
alat00536
]
Heparan sulfate / Heparin
Morphogens
119011316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
DHQS
Motif
Other DBs
NCBI-GeneID:
119011316
NCBI-ProteinID:
XP_036940226
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Position
21:2479259..2485022
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AA seq
409 aa
AA seq
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MVLMRVMLSVALCLLLASVASGCGPGRGYGKRRHPKKLTPLALKQFIPNVAEKTLGASGK
YEGKITRNSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQWPGVK
LRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYESKAHI
HCSVKAENSVAAKSGGCFPGLSTVILSDGRTKLLKELCVGDKVLATDQQGNIVPSDFLMF
LDQDQHITREFVVLETDEPRRRLTLTPAHLVFVINNNTQNSNIQAVFASDVKPGQWLYAV
GNDWPHHLISAKVISISVEHNEGSYAPITSHGTIIVDGVLASCYAVVDNHHLAHWVFAPV
RLWHSFLSLVGLLKELDSVHQAEGVHWYPELLYHVGGWLLDSNSFHPQS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgatgagagtgatgctgtcggtggccctctgcctgctgctggcgtctgtcgcc
tctggctgcggaccgggcagaggatacgggaagcggaggcatcccaagaagctcacaccg
ctggctctgaaacagttcatccccaacgtggcagagaaaacgctgggagccagcggaaag
tacgaaggcaagatcacccgcaactcggaaagattcaaggacctgactcccaactacaac
cccgatattatttttaaggatgaggagaacaccaacgcggaccggctcatgacacaacgg
tgtaaggacaaactgaattctttggctatttcagtcatgaatcagtggcctggggttaaa
cttcgggtcacagagggctgggatgaggacggccatcattctgaggagtctctgcattat
gagggccgagcggttgacatcaccacctcagaccgggacaagagcaagtatggcatgctg
tccaggctggctgtggaggcgggctttgactgggtatactatgagtccaaagcccacatc
cactgttctgtgaaagcagaaaactctgtggcagctaagtctggaggttgtttccctggt
ttgtccacggtgatcctgtcagatggaaggactaaactactgaaggagctctgtgtgggg
gacaaggtgctggctactgaccaacaaggaaatattgttcccagtgattttcttatgttc
ttggaccaggaccaacacatcacccgagagtttgttgtcctagaaactgacgagccacgc
cgcagactgacactgactccagctcaccttgtctttgttataaacaacaatacccagaac
agcaacattcaggccgtgttcgccagtgatgtaaaaccaggacagtggctatatgctgtt
gggaatgactggccccaccatcttatctctgcaaaagtgataagcatttctgtggagcat
aatgaaggatcgtatgcacctataacatctcatggaaccatcatagttgatggggttttg
gcatcctgctatgctgtggttgataatcatcatcttgcacactgggttttcgctccagta
cgactgtggcactccttcttgtcactggttgggctgttgaaagagctcgacagtgtgcat
caagcagagggtgtccactggtatccagagctcctgtatcatgttggaggttggcttttg
gacagcaactcttttcacccacaaagctga
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