Acanthopagrus latus (yellowfin seabream): 119011357
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Entry
119011357 CDS
T08233
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119011357
Spliceosome [BR:
alat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119011357
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
119011357
NCBI-ProteinID:
XP_036940300
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All DBs
Position
21:complement(1011537..1041411)
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AA seq
523 aa
AA seq
DB search
MDGDVAVGVKRGSDELNMYSSSPNSMTANGSDSKKQRLDESPPSRVLHIRKLPNEVSETE
VIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNTPVFIQYSNHK
ELKTDSALNQRAQAVLQAVSAVQDGSSPSSDPGVLDLAPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPTGDGESANKDHSLLGTPSGALASYSSGGGYSSSLSISQ
GGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSLFTLFGVYGDVQRV
KILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFGKVMRVTLSKHQTVALPREGLDDQLLT
KDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIRDGVGEDDLRLLFSNSGGTVKAFKFF
QDRKMSLIQMSSVEEAIQALMDLHNYDMGGNHHLKVSFSKSTI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgttgcggttggtgtgaagagaggctcagatgagctcaacatgtacagt
agcagccccaactctatgactgcgaacggcagtgacagtaagaaacagcgtctggatgaa
tcccctccctccagagttctccacattaggaaacttcccaatgaagtgtcagagactgag
gtcattgctctggggctgccttttggaaaggtcaccaacatactgatgctgaaggggaaa
aaccaggcatttctggagttgggtacagaggaagcagccattactatggttaactactac
acagctgtcacaccacaggtcagaaacactcctgtcttcattcagtactccaaccataag
gaactgaaaacggactctgctctgaaccagagggctcaggctgtattgcaggcagtgtca
gcagtgcaggatggaagctcgccgtcttctgaccctggagttttagacctagctccacct
cccagcccagtcctgcgaattatcattgacaacatgttttatcctgtgacactggatgtt
ctgcaacagatcttcagtaagtttgggaccgtgatgaagataataaccttcaccaagaac
aaccagtttcaggctcttctgcagttcagcgaccctgtcaatgcacagcaagctaaactg
tctttggatggacagaacatctacaattcatgctgtactctgcggatagacttcagtaaa
ctggtcaacctcaatgtcaaatacaacaatgataagagtcgagactacaccagaccagac
cttcccactggagatggagaatcagccaacaaggatcattctttattgggtaccccatct
ggagcgctagcgtcctactctagtggaggaggttactcatcttctctctccatctcacaa
ggtggaggagccattagcccactgagtgctgctgcagcggctgcagcagctgctggtcgt
gttgctctgtctgggtctggagtatcaggagtcctactggcttccaacctaaatgaagag
atggtcacgcctcaaagtctctttaccctcttcggagtctatggtgatgtccagagggtg
aagattctctacaacaagaaggatagtgctctgatacagttgtctgatgggaaccaggct
caactggccatgagccatttgaatggtcagaaggtctttggtaaagtgatgagagtaaca
ctgtctaaacatcaaactgtggctctgcccagagaaggattggatgaccaactactcact
aaagacttttctggctcacccctccatcgctttaagaagccaggatccaaaaacttccag
aacatcttccctccgtctgcaacgcttcatctctccaatatccgggatggcgttggagag
gatgatctacgccttctgttctctaatagtggaggaaccgtcaaggccttcaagttcttc
caggaccgtaagatgtctttgatccagatgtcatcagtagaagaagctatccaggctctg
atggatctccacaactatgacatgggagggaatcaccatctgaaagtttccttttcaaag
tcaaccatctaa
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