KEGG   Acanthopagrus latus (yellowfin seabream): 119011470
Entry
119011470         CDS       T08233                                 
Symbol
itga6b
Name
(RefSeq) integrin alpha-6b isoform X1
  KO
K06485  integrin alpha 6
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04382  Cornified envelope formation
alat04510  Focal adhesion
alat04512  ECM-receptor interaction
alat04514  Cell adhesion molecule (CAM) interaction
alat04518  Integrin signaling
alat04810  Regulation of actin cytoskeleton
alat04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:alat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119011470 (itga6b)
   04514 Cell adhesion molecule (CAM) interaction
    119011470 (itga6b)
   04518 Integrin signaling
    119011470 (itga6b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119011470 (itga6b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119011470 (itga6b)
   04810 Regulation of actin cytoskeleton
    119011470 (itga6b)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    119011470 (itga6b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:alat04147]
    119011470 (itga6b)
   04515 Cell adhesion molecules [BR:alat04515]
    119011470 (itga6b)
   04090 CD molecules [BR:alat04090]
    119011470 (itga6b)
Exosome [BR:alat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119011470 (itga6b)
  Exosomal proteins of breast milk
   119011470 (itga6b)
Cell adhesion molecules [BR:alat04515]
 Integrins
  Integrin alpha subunits
   119011470 (itga6b)
CD molecules [BR:alat04090]
 Proteins
  119011470 (itga6b)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 119011470
NCBI-ProteinID: XP_036940519
LinkDB
Position
21:complement(23158066..23173837)
AA seq 1080 aa
MEGSRITCGLWLLVFLSGCGRLSSFNLDSENVVRRSGDRDSLFGFSLAMHRQVDPDRRVL
LVGAPKAKALSGQKSKVTGGLYSCDINSPGCTRVNFDNEEDLKSESKENQWMGVTVNSQG
PGGKIVTCAHRYQKRSNVGKAIESRDIIGRCYVLSQDLTIDPLSIEDGGNWHFCNGRARG
HEMFGSCQQGLSATFDKDYHYLIFGAPGAYNWKGVVRLEQKNETFIEMGIYEDGPFEAGD
EGEKNPDEVPAPPNSYLGFALDSGKSLVEKGVLTVVAGAPRANHSGAVVLLKKGESRNLL
EQYTLEGEGLASSFGYDLAVLDLNMDGWQDIVVGAPQYFEKEGEIGGAVYVYINKGGKWN
EVKPERIDGPQDSMFGLAVENLGDINQDGYHDFAVGAPYDANGAGTVSIYHGAAKGLSSK
DAAQVLSGKNLGVKLFGYSLAGNMDLDKNSYPDLAVGSLSDSVFVFRARPVINIKKEIVF
SPKKIDLTTKNCGNSFCLNVKVCFTYTANPKNYAPSLTVAYTLAADADKKEKGLIPRGTF
KDTGGSESKGIISMNSKGKQQCVERELQIQENIKDKLHGIPIDVSVAIQDAKRKRRQSSA
PLSPVLDDKEDKTTRSEVHFLKEGCGTDDICRSKLQVKYRYGYRTTDQDTFDPLKLENDV
PVISLSDQKDIALEVTVSNLKGDDAYEARVVATFPRTLSYSAFRVPANEQQVTCVANKDG
SQADCELGNPFKRDSTSTFYIILSTSGISPNTTELEINLQPETTSNQMNLAPIKAKAKVN
IKLQLSVSGIAQPSQVYYTGEVKGEAAMKSESEIGSAITHQIRIINLGKRLTDFGTTTLE
IDWPKETDKGKWLLYLTKISSTGVDHMECSPEEEVNPRKLALSSSRMRRAAENTKGSDEG
TFSRLLDKKKYETLSCGKGAKCVKIRCPLRGLDSNAVITLNSRLWNGTFIEDYSTLHHVE
VIVKASLNVDSTTKNTVLENKDTEVKLTVFPERREAQYGGVPWWIIVLSVLFGLMLLALL
AFLLWKCGFFKRAKYEDKVPSYSAVRIKREERAISPGHGNWENLEKKPWMTTWHDKEHYS
NT seq 3243 nt   +upstreamnt  +downstreamnt
atggagggcagcaggatcacctgtggactgtggctgctcgtctttctctcggggtgtggg
cgactgtcctccttcaacctggacagcgagaacgtggtgcggaggagcggggaccgggac
agcctgttcggcttctccctcgccatgcaccggcaggtcgacccggacaggagagtgctg
ctggtcggcgccccgaaagcaaaagccttgagtggtcagaagtctaaagtgacgggagga
ctgtacagctgtgacatcaactcacctggttgtaccagagttaactttgataatgaagag
gacctgaaaagtgaaagcaaagagaaccagtggatgggggtgactgtcaacagtcagggg
ccaggaggcaagattgtgacctgcgcccatcgctaccagaaacggtccaacgtgggaaaa
gccatcgagtcccgagacataatcggccgctgctacgtgctgagccaggacttaacaatt
gatcccctttcaattgaggacgggggtaactggcatttctgcaatggccgagccagaggt
cacgagatgtttggctcctgccagcagggcctctctgccaccttcgacaaggactaccac
tacctcatctttggtgctcctggagcgtacaactggaaaggtgtggtgcggttggagcaa
aagaatgaaaccttcatagagatgggcatctatgaagacggtccttttgaggcaggagat
gagggcgaaaagaaccctgatgaggtccccgctcctccaaacagctacctgggcttcgct
ctggactcggggaagagtctggtcgagaagggcgttctgacggtggtggccggagctccc
agagcgaaccacagcggggccgtggtgctgctgaagaaaggcgaaagcagaaacctactg
gagcagtacacgttggaaggggaaggcctcgcctcatcgtttggctacgatctggccgtg
ttggatctcaacatggatgggtggcaggacatcgtggtgggagcgcctcagtactttgag
aaggagggagaaatcggaggagccgtctacgtctacatcaacaaaggcggaaagtggaac
gaagtcaagcccgagaggatagacggacctcaggactccatgtttggactggctgtggaa
aacctgggggacatcaatcaggacggttaccacgactttgctgtgggagctccttatgat
gcaaacggtgctgggaccgtttccatctatcacggtgcagcgaaaggtctcagctctaaa
gacgctgcacaggtcctatctggcaaaaatctaggagtcaagctctttggctactctctc
gcgggaaacatggacctggacaagaactcctaccctgacctcgctgtcggatccctctct
gactctgtcttcgtcttcagagctcgtccagttattaacatcaagaaggaaatcgtgttc
agcccgaagaaaatcgacctcaccacgaagaactgtggcaactctttctgcttaaacgta
aaggtgtgcttcacctacactgccaaccccaagaactacgctccgagtctgacggtggct
tatactctggcggccgacgctgacaagaaggagaagggtctcatccccagagggaccttc
aaggacactggtggctccgaatccaaagggatcatcagcatgaacagcaaaggaaagcag
cagtgtgttgaacgtgagctccagatacaggaaaatatcaaagataagctgcatgggatc
cccatcgatgtgtctgtggcgatccaggacgccaaacgtaaacgcagacagagctcagct
ccgctgtcgcctgtcctagatgacaaagaggataaaacgactcgatcagaggtgcatttc
ctgaaggagggatgtggcaccgacgacatttgtaggagcaaattgcaggtgaaatatcgc
tatggctacaggacgactgaccaagacacattcgatccattaaagctggagaacgacgtg
ccggtgatctcgctcagcgaccagaaggatatcgctctggaggtcacagtcagcaatctg
aaaggagacgatgcgtacgaagcccgtgtggtcgccaccttcccacgcaccctttcttac
tctgctttccgcgttccagcgaatgagcagcaagtaacctgcgtggccaataaagacggc
tctcaggctgattgtgagcttggaaaccccttcaaacgtgactcaacgtcgaccttctac
attattctgagtacatcaggaatctctccaaacaccactgagctggagataaatctacag
ccagagacgacaagcaaccagatgaacttagcccctattaaagcaaaggcaaaggtgaac
atcaagttgcagctgtctgtatcgggaatagcccagccgtctcaggtctactatacagga
gaggtcaaaggtgaggctgccatgaagtctgaaagtgaaatcggcagtgctatcacacac
cagatcaggatcatcaatctgggaaagcgcttgacagactttggcaccaccaccctcgag
atcgactggccaaaggagacagacaaggggaagtggcttctctacctgacgaagatcagc
tccactggagtggaccacatggagtgctcccctgaagaggaggtcaaccctcggaagttg
gcgctaagttccagcaggatgagaagagcagcagaaaacactaagggaagcgacgagggc
actttctcacgtttacttgacaagaagaaatatgaaactctgtcctgtggcaagggggcc
aaatgtgtgaagataaggtgccccctgcggggcctggacagtaatgcagtcatcactctc
aactctcgcctctggaacggcaccttcatcgaggattattccacgttacaccacgtggag
gtgatagtgaaggcctctctgaatgtggatagcacaacaaagaacacagtgctggagaat
aaagacacagaggtaaagctgacggtgttcccagagaggcgtgaggctcagtatggcggc
gtgccgtggtggataatcgtgctgtccgtcttgttcgggctgatgctgttagccctgctt
gctttccttctctggaagtgtggcttctttaagcgagccaagtatgaagacaaggttccc
agttacagcgctgttcggatcaaacgggaggagagagcgataagccctgggcacggtaac
tgggaaaacctggaaaagaagccctggatgacaacctggcacgacaaagaacattattct
taa

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