Acanthopagrus latus (yellowfin seabream): 119011686
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Entry
119011686 CDS
T08233
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4 isoform X1
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04020
Calcium signaling pathway
alat04148
Efferocytosis
alat04218
Cellular senescence
alat04310
Wnt signaling pathway
alat04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119011686 (nfatc4)
04020 Calcium signaling pathway
119011686 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119011686 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
119011686 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119011686 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119011686 (nfatc4)
Transcription factors [BR:
alat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
119011686 (nfatc4)
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GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
119011686
NCBI-ProteinID:
XP_036940905
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Position
21:complement(11315562..11330191)
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AA seq
900 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPRQSQGPSPVRTAEPESSVPGDESEVALLNLDPSNS
SSLVTDNHTAANHAGHSISIPSPPPSASQRAGMHSPPPRRAPSREFSGTYESLPARSVQV
SESRVVECPSIQITTISPEDDPAPTISSYWDMGSGGGWDRERLYLPLLDPFSYRDRCPSS
LSPSPASSPSSRGWLSPASSCDSLLVEEEELNDATINFGLSPSSRPTSPGGKKRRNSPLA
SPCNSRRGSYSEDLQGCNLDGGDSITLSQAPPSSCELSIPQKTRKTSLEQLSTREVDQEQ
APGHSTPCLLPETQQPRREPPSQGMDYLSVPPALAWGRTRASAHSPLFRSNALPPLDWPL
PSQFDPYELRIEVQPRPHHRAHYETEGSRGAVKAAPTGHPIVKLCGYTERKPLSLQVFVG
TADDRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLNPENNMTALIDCAGILKL
RNSDIELRKGETDVGRKNTRVRLVFRTHLPLAPPLAPPGRVLALQVASLPIECSQRSAQE
LPVIESVSLTSCSVEGGEELLLSGSNFLPISRVLFMERGTDGKLQWEEEAHIDRDNSNEC
LLCVRVPAYSDLSISRPMSVSLYVSNGKRKRSSTHCFKYLPIMFKEEDPLLSRPSVLPLD
GGSVCPVGVQPRMDRGFHVADDRSLGFHLPPYPSTYSPPCPTMGYHEEYCSKPDAVAEEP
GGSRAALSERHPSFENLELGFTELLPPLYHRGPQPPSPSPSPWLDSPYLSSSPSPSHSSS
LSPFPAGSPISTSPLPPIPTSPYPHYSAYPQEVCPSPPSNNNQYQDMCTAPYSHYDGWDP
QGRVLGIEHGGERDAKIQDCPLEFTSSASMHHITFEEVTEFIGEDIQSYQSGSQMDNQPN
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctccggctgggaggagggcgagttcgagttcaagttggtgttt
gaggaggacccgccgcggcagagccagggaccatccccggtgcgcacagccgagccggag
agctccgttcccggggacgaaagtgaggtcgccctgctgaatctcgacccctccaacagc
agcagtctggttacagataatcacacggcagccaatcatgcaggacactcaatcagcatc
ccaagtccgccaccctcggccagtcagcgggctgggatgcattccccgcccccgcggcgg
gccccttccagagagttcagtggcacctatgaaagccttccagctcgctccgtacaggtt
tcagaatctcgtgtggttgagtgtcccagcatccagataaccaccatctcccctgaggat
gacccagcacccaccatttccagttattgggacatgggcagcggtggcgggtgggaccga
gagcgcctctacctccccctgctggatcccttttcttaccgcgacagatgccccagctcc
ctcagcccgagccccgcctccagcccctcctcccgtggctggctgagcccagcctccagc
tgtgactccctgctggtggaggaggaggagctgaatgacgccaccatcaactttgggctc
tcgccgtcctcgaggccgacttcccctgggggcaaaaagcgtagaaactcccccttggcc
tcgccctgtaactcccggaggggcagttactcagaggatctgcagggatgcaacctggac
ggcggggactccatcactctgtcacaagctccgcccagcagttgtgagctcagcatcccc
cagaaaaccaggaagacgtcgttggaacagctgtctaccagggaggtggaccaggagcag
gctccaggccacagcaccccctgcctgctgccggagacccagcagcccaggagagagccc
ccctcacagggcatggactacctctctgtgccccctgctctcgcctggggtcggaccaga
gccagcgcccacagtcctctgttcaggtccaacgccctgccgccactcgactggcccctg
ccatcccagttcgacccgtacgaactgcgtatcgaggtgcagccccgtccacaccacaga
gcccactatgagacagagggcagcagaggagccgtcaaagctgcaccaacaggacatccc
atcgtcaagctgtgtggatacacagagaggaagccgctctcccttcaggtcttcgtcgga
acagctgacgaccgatcgatcaggccacatcctttctatcagatacacagggtgacgggg
aagatggtgggtactgccagtcatgagagcgtccaggcggggaccaaactgctggacatc
cccctcaaccctgagaacaacatgactgcactcatcgactgtgctgggattctgaaactg
aggaactcggacatcgagctgaggaaaggagaaacagacgttggaaggaagaacacacgt
gtccgtttggtatttcgcacccacctccctctagcaccccctttggccccgcctggtcga
gtcctggctctgcaggtcgcttccctgcccatcgaatgctcccagcgttcagctcaggag
ctgcccgtcatcgagtctgtcagtctcacctcctgctccgtggagggaggggaggagctg
ctgctgagcggctcgaacttcctgccaatctccagagtccttttcatggagagagggaca
gatggtaaattacagtgggaggaggaggctcatatcgaccgtgacaacagcaacgagtgt
ttgttgtgcgtgagggtccccgcctacagcgacctgtccatcagccggccgatgtcggtt
agtctttatgtctccaatgggaagaggaaacggagcagcactcactgcttcaagtatctc
cccataatgttcaaagaggaggacccgctgctgtcccggccctctgtgctgcctctggat
gggggatctgtgtgtcctgtgggggttcagcccaggatggaccggggcttccatgtggct
gatgatcgaagcctgggcttccacctgcccccctacccctccacctactcccctccctgc
cccaccatgggctaccacgaggagtactgctccaaacccgatgctgtggcggaggagccc
ggcgggtccagggcagccctgtccgagcgtcaccccagctttgagaacctggagctgggc
ttcaccgagctcctccctcccctgtaccaccgcggcccgcagcctccctccccctcccct
tccccatggctggactcgccctacctgtcctcctcgccgtctccctcccactcctcctct
ctcagcccgtttcctgccggtagccccatctcgacctcccctctgcctcccatccctaca
tctccttacccccactactctgcttatcctcaggaggtgtgtccgtcccctccctccaac
aacaaccaatatcaggacatgtgcacggcaccctactcccactacgatggctgggacccc
cagggaagggtgctggggatagaacatgggggagagagggatgccaagatccaggactgc
cccctggagttcaccagctctgcctctatgcaccacatcacatttgaagaagtgacggag
ttcatcggggaggacatccagtcgtaccagtcaggctcacagatggacaaccaaccaaac
tga
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