Acanthopagrus latus (yellowfin seabream): 119012113
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Entry
119012113 CDS
T08233
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119012113 (taf1a)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
119012113 (taf1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
YozE_SAM_like
Motif
Other DBs
NCBI-GeneID:
119012113
NCBI-ProteinID:
XP_036941497
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Position
22:12394951..12400313
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AA seq
416 aa
AA seq
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MDDLEKELRPLDDLEDSSDDNSSIGIKKSKLPLVNPICEETLKETGFHRSTRGCLEQIRD
ALLHHRWQEAAEYMACYPQMLENTTHSAVQQSKELIWRISTEILHHHPNSRLEDYNNIYE
RMKHSGVKHYLMICLEHSFHLMLNGHIEDAKHQLSVAESWRHGKESAAQYQNTKLIQAYR
SLLDYIIWCDKKFTHSKTDHHDTGDNQDMHSYFRQASVNLKEILKNPGVWDPFILSYVEM
LEFYEDHEEALKVLNDYAYDDTFPPNPNAHVYLYQYLKRHNATDKKLIKVLKVLHVLVPS
HELMLEYSSLLLQSEKKSDHQKALGVILEMLDFACWRGNLDVWKRLKAIIQKLQLQEDWK
DVVSEKMAARKDWWPALHFTRFHASKDSEENPELKEVKASLTKILCPDLTLKYSAG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttggaaaaagagctcaggcctctcgacgacttagaggattcctctgatgac
aactcttcaataggaattaagaagtcaaagctccctctggttaatcccatttgtgaagag
acactgaaggaaaccgggtttcaccggagtacgcgaggctgtctggagcagatcagagac
gccctgctgcatcatagatggcaagaggcagcggagtacatggcgtgttacccgcaaatg
ttagagaacacgacccacagcgcagttcagcagtctaaagagcttatttggagaatcagc
actgagatccttcaccatcacccaaactcaaggctggaagactacaacaacatctatgaa
cgaatgaaacactctggagttaaacattacctgatgatctgtctggaacattcattccac
ctgatgctcaacggccacatcgaggatgcaaagcatcagctgtctgttgctgagagttgg
aggcatgggaaggagtcagcagctcagtatcagaacactaaactgatccaggcctacagg
agtttactggattacatcatctggtgtgacaaaaagttcacacactccaaaactgatcat
catgacactggtgacaaccaagacatgcacagctacttcagacaggcctccgtgaatcta
aaggagattttgaaaaatcctggagtctgggatcccttcatactgagttatgttgagatg
ctggagttctacgaggatcacgaggaggctttaaaagtcctgaatgattatgcttatgat
gacactttcccacccaatcccaacgcacatgtctacctgtaccagtacttaaagcggcat
aatgctacagacaagaagctgattaaagtactgaaggtccttcatgtgttggtcccaagc
catgagctgatgttggagtacagctctctcctgcttcagtcagagaaaaaaagtgaccac
cagaaagcattaggagtcattcttgaaatgctggactttgcctgctggagaggcaacctg
gacgtgtggaagagattaaaagccattattcagaaattacagttacaagaggactggaag
gatgttgtctctgaaaaaatggctgcaagaaaagactggtggcctgcgctgcacttcaca
agattccacgccagtaaagactctgaggagaacccggagctcaaggaagtgaaggcatca
ctgacaaaaatcctttgcccagacctcacgctgaagtactcagctggatag
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