KEGG   Acanthopagrus latus (yellowfin seabream): 119012319
Entry
119012319         CDS       T08233                                 
Name
(RefSeq) PH-interacting protein isoform X1
  KO
K11797  PH-interacting protein
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:alat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:alat04121]
    119012319
Ubiquitin system [BR:alat04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     119012319
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Bromodomain WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_HPS5 McrBC
Other DBs
NCBI-GeneID: 119012319
NCBI-ProteinID: XP_036941917
LinkDB
Position
22:22266538..22301845
AA seq 1850 aa
MASDSTHIAQLTSELYFLIARFLEAGPCQKAAETLIREVEEKELLPRRLDWTGLEHPGTY
ENLVKLYRHVSADHLLQVCSRVCPLLEREVPASVPGLTSLLGAGRQNLLRTTKSCKHVVW
KGSALAALHCGRPPEPPIIYGSPPNIVETSFGRRLNGSYRLRQLVPTAVYQHMKMHKRIL
GHLSSVYCVTFDRTGRRIFTGSDDCLVKIWGTDDGRLLATLRGHAAEISDMAVSYENTMI
AAGSCDKTIRVWCLQTCAPLAVLEGHAASITSLQFSPLCSGSKRYLSSTGADGTICFWQW
DARTLKFGQRPSKFTERSRPGVQMICSSFSAGGMFLATGSTDHIIRVYYFGSGQPEKISE
LESHTDKVDSIQFSHCSDRFVSGSRDGTARIWQLQPQGWRSILLDMQTKLPGKYNPPPLE
DKVTKLKVTMVAWDRHDGTVITAANNLTLKVWNSTTGNLVHVLMGHEDEVFVLEPHPFDP
RILFSAGHDGNCIVWDLARGVKIRSYFNMIEGQGHGALFDCKCSPDGQHFAATDSHGHLL
IFGFGSSSKYDKIADQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHP
PRYQRLVPGREGCRDEQLIPQMGVTSSGLNQVVSEQAVDGSSPLDTMIQRLQQEQDQRLG
TNETRASRGSVGSPTEVHSPPNVGLRRSGQIEGVRQMHSNAPRSQMATEGDLVAWSRRVL
VPELEDASVRRQVNWREAKGEEEINIYQSERRRRTIHSLPKESRVHLTSECVVDEARRSQ
GNHGYQTRAAMEETSRQSAEAADDDESISEGEVEVRQINGHSSEEEKEEEEKEPWPDDHS
SSSDYSSDYSDWTADAGINLEPPKKSVKVKKKSRGSEEDEEKKRDGKKERKKEKADKDGA
LPKKKQPKEKRKRTELQEQGLTLEEWLPSAWITDTVPRRCPYIPQMGDEVYYFRQGHEAY
VEMAKQKKIYSINPKKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLSFLDPDTGKLT
GGSFSMKYHDMPDVIDFLVLRQQFDNARKRQWAIGDRFRSVIDDAWWFGTIESQEPYQSQ
YPDSLFQCYNVCWDNGDTEKMSPWDMEPIPDDGSRSIAPCAATFPEELGMSVPLVEAEQK
ELLYVPLEGEWGCRTRAEECDRIIKAIDQLCTLDVAAPFSFPVDLQAYPTYCTVVAYVTD
LSTIRQRLVNRFYRRLSSLMWEVRYIEHNTQTFNEPGSFIVTTAKFVSDLILQFVKDQSL
TDIMPLYRTMKKATFSDSEDEEEEEEDDEDTNTPGTSTRKHKGRQPMRRQLRTRPPSYDP
QAWRARCKELLDLIFQCEDSEPFREPVDLQEYPDYLQIVESPMDFGTVLNTLTEGKYQSP
IELCKDVRLIFSNSKAYTPSKKSRIYSMSLRLSALFEEHVSSILADYKAIHGLTDRLTRQ
GTDRQTRHTTDRQTRHAMKRRRRRSESPTSSTASSPERKRRVSSRVTGKREPSPPAPSRP
SLRQSAPPKQPPQLVNGKADTAAAGRTRSAARHSTHTPPSSSSSHNATSNTQGTAESTRS
LRAHNSVSASTPPAPEKVTPSPATESSGGGSTRRKLRTPVRHTPGSPVSPSSPSTVHLNG
HSSHVTVGVGRRGRKSRADAPVSPPEAATPGSPSRPRGRPPGKKRGRKSKQELEEMRRSS
NRRSSTPDDDLDQSTGDEGGTSSAQETSVLSDSGTASTPRRRGRPRAVKTDEDAPRAESP
EPPEPSPLRRSSRRTNEEVTPPPQAQAPQRSSRREALKEEAGDGDGDGDGEGGSMRTRNQ
GRRSAWYMEEDSEEEQRQLLFEDSSITFGTSSKGRVRKLTEKAKANLIGW
NT seq 5553 nt   +upstreamnt  +downstreamnt
atggcttcagacagtacacacatcgcgcagttgacttctgaactgtacttcctaatagcc
cgatttctagaagctggaccgtgtcagaaagcagccgagaccctgataagggaggtggag
gagaaggagctgctgcccagaaggctggactggaccgggctggagcaccccgggacgtac
gaaaatttggtgaaactgtaccgacatgtcagtgcagaccacctgttgcaggtctgctcc
agagtttgtccgctgctggagagggaggtccccgccagcgtgcctggactcacgagcctg
ctgggggccggcaggcagaatctcctccgcaccacaaagagttgcaagcatgttgtgtgg
aagggctcagcgctggctgcgctgcactgtgggcgaccaccggagccgcctattatctac
ggcagcccgcctaatatcgtcgagacgagcttcgggcgccggctgaatggctcctaccgt
ctccggcagctggtgcccacggctgtgtaccagcacatgaagatgcacaagaggattctg
ggacacctgtcgtccgtgtactgcgtcaccttcgacaggacgggacgacgcatcttcacg
ggctcagacgactgcctcgttaagatctggggaacagatgatgggcggctactggcgacc
ctacgtggccatgccgctgagatctcagacatggccgtcagctacgagaacaccatgatc
gctgccggctcctgtgacaagactatcagagtgtggtgcttacagacctgcgcccctttg
gccgtcctggagggacacgcagcctccatcacctcactgcagttttctcccctctgtagc
ggctccaagcgctacctgtcctccaccggagctgacggcaccatctgcttctggcagtgg
gatgcgcgcacgctcaagttcggtcagaggcccagtaagttcacggagcgttccagacct
ggcgtccagatgatctgctcgtccttcagcgcaggtggtatgttcctggcaacaggaagc
acggatcacatcatccgggtgtattacttcgggtcaggccaaccagagaagatctccgag
cttgagtcccatacggacaaagttgacagcatccaattttcacattgcagtgacaggttc
gtaagtgggagcagagatggtacagcgcgaatctggcagctgcagcctcagggctggagg
agcattctgctggacatgcagaccaaattacccggaaagtacaaccccccaccgctggag
gacaaggtgaccaagctgaaggttaccatggtagcatgggaccgccacgacggcacggtg
atcacggcggccaacaatctcacgctgaaggtgtggaactcaacgaccggcaacctcgtc
cacgtcctcatgggtcacgaggacgaggtgtttgttctggagccacaccccttcgatcca
agaatccttttctcagcgggtcatgacgggaattgcatcgtgtgggacctggcgagagga
gtgaagatccgctcgtatttcaacatgattgagggccaagggcacggagcattgtttgac
tgcaaatgtagtccagatgggcagcactttgccgccaccgactcccacggacacctgctc
atctttggcttcggctccagcagcaagtacgacaagatagcggaccagatgttcttccac
actgactaccggccactgatccgggatgccaacaactacgtgctggacgagcagactcag
caggcgccgcacctgatgcccccacccttcctggtggatgtggacgggaaccctcacccc
ccgagataccagcggctggtgcctggcagggagggctgcagggatgagcagctgatcccg
cagatgggggtcacttcctcaggccttaaccaagtggtgagcgagcaggcggtggacggc
tccagtcctctggatactatgattcagaggctgcagcaggaacaggaccaaagactggga
accaatgagaccagggccagcagaggatcggtcggttcgcccacagaggtccactctccg
cccaacgtgggtctgcgtcgcagcgggcagatcgagggcgtccgccagatgcacagcaac
gccccgcgcagccagatggccacggagggcgacctggtggcctggagccgcagggtgctg
gtccctgagctggaggacgcctccgtcaggagacaggtgaactggcgtgaggctaaaggg
gaggaggagatcaatatttatcagtcagaaaggaggagacgcaccatccactcactcccc
aaggagagcagggtccacctgacgtcggagtgtgtcgtcgacgaggcgaggaggagccag
ggtaaccacggctatcaaactcgcgccgccatggaggagacgagccgccagagcgccgag
gctgccgatgacgacgaaagcatctcggagggagaggtggaggtgcggcaaatcaacggc
cattcctcagaggaggagaaggaggaggaggaaaaggagccctggccagacgaccacagc
agttcaagcgactactccagcgattattccgactggacagcagatgcagggatcaacctt
gaaccacccaagaaaagtgtaaaggtaaaaaagaaaagcagaggctccgaagaggatgag
gagaagaagagggacgggaagaaggagcgaaagaaagagaaagcagacaaagacggcgcg
ttaccaaagaagaagcagccaaaggagaagaggaagaggacagagctgcaggagcaaggg
ctcactctggaggagtggcttccctccgcctggatcacagacacggtcccccgcagatgt
ccttacataccccagatgggagacgaggtgtactacttcagacagggccatgaagcctac
gtggagatggccaaacagaaaaagatttacagcatcaatcctaagaagcagccctggcac
aagatggagctccgggagcaggaattgatgaagatagttggcatcaagtacgaggtcggc
ctgcccacgctgtgctgtctgaagctttcctttctggaccccgacaccggaaaactgacc
ggaggatccttctctatgaaataccacgacatgcctgatgtcatcgacttcctggtgctg
cggcagcagtttgacaatgccagaaagagacagtgggctataggtgacaggtttcggtca
gtgattgacgacgcctggtggtttgggaccattgagagccaggagccctaccagtctcag
taccccgacagcctgtttcagtgctacaacgtctgctgggacaatggagacacggagaag
atgagtccttgggatatggagcccatccccgatgatggttctcgttcgattgctccttgt
gcagccacgttcccggaggagttgggcatgagcgtcccgctggtggaggcagagcagaag
gagctgctgtacgtcccgttggaaggcgagtggggctgccgcacacgcgcagaagagtgc
gaccgcatcatcaaagccatcgaccagctctgcacactcgatgtcgcggcgccattttcc
tttccggtggacctacaagcttaccccacgtactgcacagtagtggcctacgtcactgac
ctcagcaccatacgccaaaggctggtgaaccgcttctacagacgactgtcctctctgatg
tgggaggttcgttacattgaacacaacacccagacgttcaatgagcccggatcgttcatc
gtcacgacggccaagttcgtctctgacctcattctgcaattcgttaaggaccaaagtctg
acagacatcatgccgctctacaggacgatgaagaaggctaccttctctgactctgaagat
gaggaggaggaggaagaggatgacgaagatactaacactcctggaacatccacacgaaaa
cacaagggtcgtcagcccatgcggcggcaactgcgaacccgtcccccttcgtacgaccct
caggcgtggagggcgcgctgtaaggagctgctggatctcatctttcagtgtgaagactcg
gagcccttcagagaacctgtggacctgcaggaatacccggactacctgcaaatagtcgag
tcgccaatggactttggcaccgttctcaacacgctaacagaaggaaagtaccagtcgccc
attgagctctgtaaagacgtccggctcattttcagcaattccaaagcttacacgcccagc
aaaaagtctcggatctacagcatgagtctgaggctctccgcactcttcgaggagcacgtc
agctccatcctggccgactacaaggccatccacggcctgaccgacagactgaccagacag
ggcaccgacagacaaacgcgacacactacggacaggcagacgcggcacgcaatgaagagg
aggaggaggaggagcgaatctccgaccagcagcaccgcgtccagcccagagaggaagaga
cgtgtatcatcgagggtgaccggaaaaagagagccgtcaccaccggctccttcgcgaccc
tctctgagacagagcgcccccccgaaacagccgcctcagctggtgaacgggaaggcagac
acggcagctgcagggcgcacacgaagtgcggcacgccattctacgcacactccaccctcc
tcttcttcctcgcataacgccacgagcaacacacagggcacagcagagtctactcgctca
ctgagggctcacaactctgtgtcggcttcaacaccaccagctcctgaaaaggtgacgccc
tccccagccacggaaagtagcggcggaggaagcacccgcaggaaactcagaactcctgtt
cgacacacacctggctctcccgttagcccttcatctccaagcacagtccacttgaatggc
cacagtagtcatgtgaccgtcggcgtggggaggaggggacggaaatcccgggcggatgcg
ccagtgagtcctccagaagccgcgactccagggagcccctccagaccccggggccgccct
cccggcaagaagagaggcaggaagagcaagcaggagctggaggagatgagaaggagcagc
aaccgcaggagctccacccccgacgatgacctcgaccagtcgacgggagacgaaggcggg
acgtcgtccgcgcaggaaacatccgtgttgtcggactctggcactgcgtcgacgcccaga
cggcgcggccggccccgagcggtaaaaactgatgaagacgctcctcgcgcagagtcaccg
gagccacccgagccctcgccactgaggaggagcagcaggagaaccaacgaggaggtgacg
cctccacctcaagctcaagctcctcagcgatccagtcggagggaggctctgaaggaagag
gcaggggacggtgacggtgacggggacggggaaggagggtcgatgcgcacacgcaaccag
gggcgacggtccgcctggtacatggaggaggactctgaggaggagcagaggcagctgctg
tttgaggactcatcaatcaccttcggcacctcctcaaagggacgcgtccgcaagctgaca
gaaaaggccaaagccaatctgataggctggtaa

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