Acanthopagrus latus (yellowfin seabream): 119012351
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Entry
119012351 CDS
T08233
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119012351 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119012351 (nup43)
03036 Chromosome and associated proteins [BR:
alat03036
]
119012351 (nup43)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119012351 (nup43)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119012351 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_THOC3
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD_LRWD1
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
KNTC1_N
Beta-prop_Aladin
Vgb_lyase
WD40_CFAP43
PSII_BNR
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
119012351
NCBI-ProteinID:
XP_036941978
LinkDB
All DBs
Position
22:complement(9258275..9262906)
Genome browser
AA seq
372 aa
AA seq
DB search
MESVNAKYVSQKISKTRWRPVSHSSLQQPDIFATGSWDNEDNKISFWSIGNNGTTGMDDG
FEGDPQLLCEHKHDGDVLDLQFLDQERIVTASSTGAVTIFRHHQNSQTISVSQSWARAHR
YPCDNAPCTGVVCSSPEIVTVGEDGRIIVFRADQEGVARVIENADSSTIHAVTYLRTSEI
LTVNSIGQLKLFDIRQQSNSPSQILSLSGDRVPLHCVDRHPNQQHIVATGGQDGMLCVWD
VRQGNTPFSLMEAHSAEMWEVHFHPSNPDHLFTCSEDGSLLHWETSSPSDMPSFLQGGRN
NSMISRSAMAPAGGNQSLINAWLSGDSSKGRLETTHMLPSQTLSVNSLDVLGQCLVCGTD
GEAIFVNRQVPV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgtaaatgctaagtacgtgtcgcagaaaatcagtaaaaccagatggagacca
gtttcacattcgtctttgcagcaaccagacatctttgcgacgggctcgtgggataacgag
gacaacaagatttcattttggtccattgggaataatggaaccactggcatggatgatgga
tttgaaggagacccacagctgctgtgtgaacacaaacatgatggagatgttctggacctt
caatttttggaccaagaaagaattgtcacagcgtcatcaactggagctgtcaccatcttc
cgccaccaccaaaacagtcagacgatatcagtttctcagagctgggcaagagcacatcgt
tacccttgtgacaatgctccctgtactggtgttgtatgcagcagtcctgagattgtcact
gtcggtgaagacggcaggatcatcgtcttcagagccgaccaggagggagtggctcgggtt
atagagaatgcggacagcagcacgatccatgctgtgacttacctgaggacatcggagatt
ttgacggtgaactctatcggccaactcaagctgtttgacatcagacaacagagcaactcg
ccatcccagattctctctctgtcaggcgatagagtccctctgcactgtgtggacagacat
ccgaaccagcagcacattgtggccacaggagggcaggatggcatgctctgtgtctgggac
gtgagacaaggcaacacacccttctcactcatggaggcacactctgctgaaatgtgggaa
gtccacttccacccatccaacccagatcatctgttcacatgctcagaggacggttcactg
ctgcactgggagacttcctcaccttcagacatgccctccttcttacaaggtggcaggaac
aacagcatgatatctcgcagtgcgatggcccccgctggagggaaccagtccctgatcaac
gcctggctcagcggagactccagtaaaggccgtctggagacgactcacatgctgcccagc
cagacgctgtccgtcaacagtttggatgtactcggacaatgtcttgtctgtgggactgac
ggagaggctatttttgtcaacagacaggtcccggtttaa
DBGET
integrated database retrieval system
