Acanthopagrus latus (yellowfin seabream): 119012388
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Entry
119012388 CDS
T08233
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119012388 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119012388 (hbs1l)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119012388 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
119012388
NCBI-ProteinID:
XP_036942039
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Position
22:complement(18164034..18187349)
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AA seq
701 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDMYGQSVDDDYCISPATANQFIYSRQDRQAPREETLEEEEY
EDEDVPMSPTVTHDLDPLDQAKLYSCLDHMRTVLGETMPDSVLTQAAMRCGFDPHKALDA
VLSEDTKTAPVPKITSEETSVARVSQENAPLPQRTKQEAVAEKAKSRDAPHSKVDSEVVP
KVARMTVSGKKQTMGFDVPSTGENGVVTASVRRGGSPENATATSASEATSKRPETPSKGS
NADEPSTVPTPGRSSGKARQALNIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYL
LGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLM
DAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAV
AVNKMDQVNWQQERFKDITSKLGQFLKQAGFKESDVFYIPTSGLSGENLVTRSSVSQLTS
WYSGPSLLEQIDAFKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDKILAM
PPNETCNVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPIRVCTRFRA
RILLFNIEVPITQGFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAIV
EIQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgttcgcggttacaactacgatgaagactttgaggatgatgat
atgtatggacagtctgtggatgatgactactgtatatcaccagcaacagcaaatcagttc
atctactcgcgtcaagacaggcaagcgccacgggaggaaactttagaagaggaagaatac
gaagatgaggatgtccccatgtcccccaccgtcactcatgaccttgaccctcttgatcaa
gcaaaactctattcttgcctggaccatatgcggactgtgcttggagaaaccatgccagac
tcagtcctgactcaagcagccatgaggtgtgggtttgacccacacaaggcactggatgca
gtcctgtctgaagacacaaagacagccccagttcccaaaattacaagtgaagagacttcg
gtagcaagagttagccaggaaaacgcgccgcttcctcaaagaaccaaacaagaggccgtg
gctgagaaagctaaaagcagagatgcgcctcacagtaaagtggactctgaagtggtaccc
aaagtggcccgcatgactgtctctggcaagaagcagaccatgggctttgatgttcccagc
accggggagaacggtgttgtgactgcttcagtacgccggggtggcagccccgaaaacgcc
accgcgacctctgcctcggaggcaacatccaaacgtcccgagactccatccaaagggtct
aatgcagacgagccctctaccgttccaaccccaggccgctcctcgggaaaagcccggcag
gcgctcaatatcaaggctgagctggagaagcgacagggtggcaaacctctgctgaatttg
gtggttataggtcatgtagatgcgggcaaaagcacactgatgggccacctgctttatctg
ctgggcaacgtcaacaagcgcaccatgcacaagtacgagcaggaatcaaagaaggcagga
aaggcttccttcgcctatgcttgggtcctggatgaaaccggggaggagagggacagaggt
gtgacaatggatgtgggcatgactaagttcgagacgaactctaaggtggtgaccctgatg
gatgcaccaggacacaaagacttcatccctaatatgatcacaggagctgcacaggccgat
gtggcggtgcttgtggtggacgccagccgaggagagtttgaggcgggcttcgaggcaggt
ggccagaccagagagcatgccctgttggtgcgctcccttggcgtcactcagctggctgtc
gctgtcaacaagatggaccaggtaaactggcagcaagaacgtttcaaagacattacttcc
aaacttgggcaatttctcaagcaggcaggattcaaggagtctgatgtcttctacatcccc
accagcggcctgtcaggagagaacctcgtcaccaggagttcagtgtcacaacttacctct
tggtactctggtcccagcctgcttgagcagattgatgccttcaaagcccctcagagatct
gtagacaaaccttttagactgtgcgtctcagatgtgtttaaagaccagggttcaggcttc
tgtgtaacagggaagatcgaggctggttacattcagaccggagataaaatactggccatg
cctcccaatgaaacctgcaacgtgaaaggtattactctccatgatgaggctctggactgg
gctgcagcaggagaccacgtcagcctgacagtcaccggcatggacatcatcaagatcaac
gtgggctgtgtgttctgtgatcccaaggagcccattcgagtctgtactcgattcagagca
cgaatccttctcttcaatatcgaggtccccatcacacagggcttcccagtattgctgcac
taccagacagtcagtgagccggccaccattaggaaactgataagcgttctacacaagagc
agcggtgaggtcctcaagaagaagccaaagtgtttgagtaaaggtatgaatgccatcgtg
gagatccagacccagagaccagtgtcattagagctgtacaaggactacaaagagctgggc
cgcttcatgctgcgatatgtcggctctaccattgctgcaggggtcgtcaccgagatcaaa
gaatga
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