Acanthopagrus latus (yellowfin seabream): 119012405
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Entry
119012405 CDS
T08233
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03410
Base excision repair
alat04210
Apoptosis
alat04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119012405 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119012405 (parp1)
04217 Necroptosis
119012405 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alat03032
]
119012405 (parp1)
03036 Chromosome and associated proteins [BR:
alat03036
]
119012405 (parp1)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119012405 (parp1)
Enzymes [BR:
alat01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
119012405 (parp1)
DNA replication proteins [BR:
alat03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119012405 (parp1)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
119012405 (parp1)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119012405 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
NAGidase
YkuI_C
Motif
Other DBs
NCBI-GeneID:
119012405
NCBI-ProteinID:
XP_036942090
LinkDB
All DBs
Position
22:complement(16257086..16269123)
Genome browser
AA seq
1014 aa
AA seq
DB search
MAETQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWQ
RAAAQSTADIGGFSDLRWDDQEKVKKAIESGGATGGKGEQKGGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELVFKPEYNAAQ
LKGFNALRAEDKEELKKRLPAVKTEGKRKADEVDGVSKKQKKEEEEEKKKLEEQLKNQSQ
LIWGIKDKLKKFCSTNDMKELLIANSQDVPSGESNVLDCLADGMAFGALEPCKECKGQLM
FKGDAYYCTGDISAWTKCVFKTPTPVRKDWVTPKEFHEVPFLKKFKFKRQNRLYPKEAPT
QTPTAAKAEPLASASSAPLERPPEGATPDKPLTGMKLIAVGKLSKNKDDLKAAVEELGGK
ITGTANKASLCFSTKKEVEKMTKKMEEVRDAGVRVVSEDFLTDIKSSGKAMQELVSLHAI
SPWGAEVKVEAQAPSVASKSGTPAAKSTGRVKEEEGSSKAKKMKLTVKGGAAVDPDSGLE
NSAHVLEQSGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKFHDKNSAMDNFLGVYKEKTGNNWSSSSFTKYPNKFYPLEIDYGQDEEAVKRLTATAG
TKSKLAKPVQELIKTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLTEVQQAV
SDSQPDSQILDLSNRFYTLIPHDFGMKKPPLLNNLDYIQAKVQMLDNLLDIEVAYSLLRG
GAQDNESDPIDINYEKLKTKIEVVDKTTDEAQIIMQYVKNTHAATHNTYTLEVQEIFKIS
REGERQRYRPFEELHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQSDPVGLLLLAEVALGNMHELKKASHITKLPKGKHSVKGVGRTAPDPSA
SVTLDGVQVPLGKGAHTNIDDTSLLYNEYIVYDVAQVNLKYLLKTKFNYQTSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcagagactcaagaggacaagctctacaaggcggagtacgccaaaagcggccgcgcg
tcgtgcaagaaatgcaaagaaaacatagcgaaagactcgctgaggatggccatcatggtg
cagtcacccatgtttgatgggaaagtcccccactggcaccacttctcctgcttctggcag
agagcagccgctcagtcaactgctgatatcggaggattttctgacctccgctgggacgac
caggagaaggtcaaaaaagccatcgaaagtggtggagcaacaggagggaaaggcgaacag
aagggtggagctaaaggagagaagacgctgaacgactttgcggttgaatatgccaagtca
aaccgcagcacatgcaaaggctgtgagcaaaaaatagaaaaggatcagatccgtgtatcc
aagaaaactgtggacccagagaagcctcagctgggtttgatcgaccgctggtaccacacg
gcctgtttcgtgagtcgcagggaggaactggtcttcaaacctgaatacaacgccgcccag
ctgaaggggttcaacgcactgcgggcagaggacaaggaggaactcaagaagaggctcccc
gctgtcaaaactgaagggaagcgtaaagctgatgaggtggatggagtatcaaagaaacag
aagaaggaggaagaggaggagaagaaaaagctggaggagcagttgaagaaccaaagtcag
ctgatttggggaatcaaggacaaactgaagaagttttgttcaaccaacgacatgaaggag
ctgttgattgcaaacagccaggacgttccctctggagaatctaatgtgcttgactgtctg
gccgacggcatggcttttggtgctcttgagccctgcaaggagtgcaagggtcagctgatg
ttcaaaggtgatgcttattactgcacgggggacatctcagcctggacaaagtgtgtgttc
aaaaccccaacacccgtacgtaaagactgggtcaccccaaaggaattccatgaagttccc
ttcctgaaaaaatttaagttcaagcgacagaacaggctttatccaaaagaggctcccacc
caaacccctacagcagctaaagcagagcctttggcaagtgcgtccagtgccccgctagag
cgaccgccagagggcgcaaccccagacaaacctctcactggtatgaaactgatcgctgtg
ggaaagctgagtaagaacaaggatgacctaaaggctgctgtggaggagctgggtggaaag
attaccggcacagccaataaggcctctctttgcttcagcaccaagaaggaggtagagaag
atgactaagaaaatggaggaagtgagggacgccggcgtacgggtggtctccgaggatttc
ctcacagacatcaagtcgtcgggtaaagccatgcaggagctggtctccctgcacgccatc
tcaccctggggtgcagaggtcaaagtggaggctcaagcgccgtcggtggcctccaagtct
ggaacgccagctgccaagagcacgggcagggtgaaggaggaggaaggcagtagcaaagcc
aagaagatgaagctcacagtgaaaggaggtgctgctgtcgatccagattcaggtctggag
aacagcgctcatgtcctggagcagagtgggaagatgtacagtgcaacgctgggtcttgtg
gacattgtcagaggaactaactcctactataaacttcagctgctagaggatgatgtacag
aagcggtactgggtgttcaggtcatggggcagagtgggcaccaccatcggaggcaacaag
ctggacaagttccacgacaagaactcggccatggacaacttcctgggtgtctacaaagag
aagacaggcaacaattggagctcctcaagcttcaccaaatatcctaataaattttacccc
ctggagattgactatggacaggatgaggaagcagtgaagaggctgacagccactgctggc
accaaatctaaactggccaaacctgtccaggagctgatcaagaccatctttgacgtagag
agcatgaagaaggccatggtggagtttgagattgacctccagaagatgcccctcggaaag
ctgagcaagaggcagatccagagtgcctactcgctcctaactgaagttcagcaggctgtg
tcagatagtcagcctgattctcagatactggatctctccaatcgtttctacacactaatc
cctcacgactttggtatgaagaaacctccactgctcaacaacctggactacattcaagct
aaagttcagatgcttgacaacctgttggatattgaagtggcctacagcctgctgagagga
ggcgcccaggacaacgagagcgatcccatcgacatcaactacgagaaactcaaaaccaag
atcgaggttgttgacaagacaacagatgaggctcagatcattatgcaatatgttaagaac
acccacgctgctacacacaacacttacacactggaagtgcaagaaatcttcaaaatttct
cgagagggagagcgccagcggtaccgtcccttcgaggagctacacaatcggcagctgctg
tggcacggttcgcgcaccaccaactacgctggtatcttgtctcagggtcttcgcattgcc
cctccagaggccccagtgaccggttacatgttcggcaaaggtgtgtactttgctgacatg
gtgtccaagagtgcgaattactgtcacacctcccagtcagaccctgtcggcctccttctg
ctggctgaggttgctcttggcaacatgcatgaattgaagaaggcctcccacattacaaaa
ctacccaagggcaagcacagtgttaaaggtgtggggagaactgctcctgatccaagcgcc
tctgtcactttagacggggtgcaagtgcctctgggcaaaggagcccacactaacattgat
gacacaagtctactgtacaacgaatacattgtgtacgatgtagcccaggtaaacctgaag
tatctcctgaagaccaagtttaactaccagacgtccctgtggtga
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