Acanthopagrus latus (yellowfin seabream): 119012507
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Entry
119012507 CDS
T08233
Name
(RefSeq) syndecan-1-like
KO
K16338
syndecan 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04512
ECM-receptor interaction
alat04514
Cell adhesion molecules
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119012507
04514 Cell adhesion molecules
119012507
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119012507
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
alat00535
]
119012507
Proteoglycans [BR:
alat00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
119012507
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
119012507
NCBI-ProteinID:
XP_036942303
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All DBs
Position
22:complement(13110878..13115568)
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AA seq
168 aa
AA seq
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MRKPLITSLFFTFVFIRPVYTTFSGLPEDLEGSGYDLESSGSGEGSEEGGIINITVDPSI
KDVRIFAVNTKGGTQNTGSSDLNFDNSLWSSKDSGFVVMANSKSFLERKEILAGVIAGGV
AGVIFAAGLAGLLIYKWQKKAEEGYVLGQQRASDEDYYRHNRDEIFVV
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacctttaattacctctttattctttacctttgtgtttatacgtccagtttac
acgacgttttctggccttcctgaagacttggagggatcaggatatgacctggagagttct
ggttcaggggaggggtcagaagaaggtggaattataaacatcacggtcgaccccagcatc
aaagatgtcagaatatttgcagtgaacaccaaagggggaacccagaatactggttcttca
gacctgaactttgacaactcgctctggtcttcaaaagacagcggatttgtcgtcatggca
aacagcaagagtttcttggagagaaaggaaatccttgcaggtgttattgcaggaggagtc
gcaggagtgatatttgcagctgggctggctggattattaatctacaaatggcagaagaaa
gctgaggaaggatatgtgctgggtcagcagagggcttcagatgaagattattacagacac
aacagggatgaaatttttgttgtttag
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