Acanthopagrus latus (yellowfin seabream): 119012575
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Entry
119012575 CDS
T08233
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119012575 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119012575 (capn3b)
Enzymes [BR:
alat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
119012575 (capn3b)
Peptidases and inhibitors [BR:
alat01002
]
Cysteine peptidases
Family C2: calpain family
119012575 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
119012575
NCBI-ProteinID:
XP_036942436
EnsemblRapid:
ENSALTG00010012133
LinkDB
All DBs
Position
22:12989421..13005320
Genome browser
AA seq
771 aa
AA seq
DB search
MGDETYKGKIPLVEDTKVKVLYETQASAGPDDKAEYPPAGTNSIYSAILSRNEAVKDAKR
LKTFLELRDKYVKKKVVFEDPLFPANDSSLFYSHKSAMKIEWKRPSEICENPQFIIDGAN
RTDICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTENYAGIFHFQFWRYGEWIDVV
VDDRIPTCNNKLVFTKSFRNNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTE
FFELSEAPKDLYNIMRKALQRGSLMGCSIDVFSASELESRTDLGLVRGHAYSIIGLAECD
EVAKNTKVRLIRLRNPWGFVLWKGPWSTNSKEWSTISIADKENLKKQTIETSEFWMSFDD
FKRNFTKLEMCNLTPDTLQCEERHSWTVSVNEGRWVRGSSAGGCRNFPETFWTNPQYRLK
LYEEDDDPEDGNVACTLVVALMQKGRRMQRHQGARFLTIGFSIYQVPKEMCGQNQHLQKD
FFLYTASKAKCKTYINLREVTERFRLPPGEYAIIPTTFEPHQEGEFILRVFSEKQSTSEE
VENTIGSDQTQQDKKKKEKPIVFVSDRARANKELEHDGILGEKKKKPKQKLLEPEEETEE
EKQFRAIYKQIAGEDMQICANELMRVMKNVLAKHSEINSEGFSLETCRSMIALMDTDGTG
KLNLQEFKHLWRKIKAWQLIFKRYDKDKTCSISSFEMRNAVNEAGFHLNNQLYDIIAMRY
ADEHLNINFDSYICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgagacgtataaaggtaaaattcctctcgttgaagacacaaaggtgaaggtg
ctttatgagactcaagcatcagctgggcctgatgacaaagctgaataccctcctgctggg
actaactccatctactctgcgattctgagcagaaacgaggccgtcaaggatgccaagcgc
ctcaagacttttttggagctgcgagacaaatatgtgaagaagaaggtggtgttcgaagac
cctctgttccccgcaaacgactcctcgctcttctacagtcacaagtctgccatgaagatc
gagtggaagcgtccctcggaaatctgtgaaaacccccagttcatcatcgatggagccaac
cggacagacatctgtcagggagaattgggtgactgctggttgctggctgccatcgcctgt
ctgacagtcaatgagaagctgctgtacagagtgattccccctgatcagagcttcaccgag
aactacgccggcatcttccatttccagttctggcgttatggcgaatggatcgatgtggtt
gtggacgaccgcatccccacctgcaacaacaagctggtattcaccaaatctttcaggaat
aacgagttctggagcgcccttttggaaaaagcttacgcaaagttgcatgggtcttatgag
gcactgaaagggggcaacactttggaagccatggaggatttcaccggtggcgttacggag
ttcttcgagctgtctgaggcgcccaaagacctctacaacatcatgaggaaggcgctgcag
agaggctcgctgatgggctgctccatagatgttttttcagccagtgaactggagagtcga
actgatctggggctggtgaggggtcatgcctactccatcatcggcctggcagagtgtgac
gaagttgcaaagaacaccaaagttcgcctgattcgcctgcgcaatccctggggttttgtg
ctgtggaaaggaccatggagcacaaattcaaaggagtggtcgaccatttccatcgcagac
aaggaaaacctaaagaaacagacgatagaaacgagtgagttctggatgtcttttgatgat
tttaagaggaacttcaccaagctggagatgtgtaacctgacccccgacacactgcagtgt
gaggagagacacagctggacggtgtccgtcaacgagggtcgctgggtgagaggcagctct
gctggaggctgcaggaacttcccagaaacgttctggacgaaccctcagtatcggctgaag
ctgtacgaagaggatgacgacccagaggacggaaacgtggcctgcactctcgtcgtggct
ctgatgcagaaaggtcgaaggatgcagcgtcatcaaggggccagattcctcaccatcgga
ttttccatctaccaggtcccgaaggagatgtgtggacagaatcagcatctgcagaaggac
ttcttcctgtacacagcctccaaggctaaatgcaagacctacattaacctgcgggaggtc
acggagcggttccgtctgcccccaggggagtatgccatcatccccacgacctttgaacct
catcaagagggagagttcattctcagggtcttctctgagaagcagagcacgtctgaagaa
gtggagaacacgatcggctctgaccaaacgcagcaagacaagaaaaagaaagaaaagcct
attgtatttgtgtcagacagagcacgagccaacaaagaactcgagcatgacggcattctg
ggagaaaagaagaagaaaccaaagcaaaaactacttgaacctgaggaggagactgaagag
gaaaaacagttcagagccatttacaaacagattgctggtgaggacatgcagatctgtgcc
aacgaactcatgagggtcatgaagaatgtccttgccaaacatagtgaaataaattcagag
ggtttcagccttgagacgtgtcggagcatgattgccctgatggatactgatgggacagga
aagctgaacctgcaggagttcaaacacttgtggagaaagatcaaagcgtggcagctgatc
ttcaaacgttacgataaggacaaaacctgctccatcagtagttttgagatgaggaacgca
gttaatgaggcagggtttcacctcaacaaccagttatatgacatcatagccatgcgctac
gcagacgaacacctcaacatcaactttgacagttacatctgctgttttgtgaggctagag
ggcatgttcagggctttcaatgcttttgacaaagatggtgatggaatcatcaaactcaat
gtcctggagtggctccagctgactatgtattcttaa
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