Acanthopagrus latus (yellowfin seabream): 119012767
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Entry
119012767 CDS
T08233
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
alat00536
]
119012767 (slit2)
Glycosaminoglycan binding proteins [BR:
alat00536
]
Heparan sulfate / Heparin
Axon guidance molecules
119012767 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
LRRNT
Laminin_G_2
Laminin_G_1
LRR_9
LRRCT
hEGF
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
Laminin_G_3
EGF_3
LRR_EndoS
cEGF
Motif
Other DBs
NCBI-GeneID:
119012767
NCBI-ProteinID:
XP_036942835
LinkDB
All DBs
Position
1:14869143..14963598
Genome browser
AA seq
1576 aa
AA seq
DB search
MVGALSPVGPGRSPATALGLLVVAALVLVLSGGADGQPCPTQCSCTGTTVDCHGQGLRSV
PRNIPRNAERLDLNANNLTKITKADFAGLRHLRVLQLMENKISTIERGAFQDLKELERLR
LNRNNLAVFPELLFLGTTKLYRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIEDG
AFRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPR
LGLYTQCMAPPHLRGHNVAEVQKKEFVCTGHQSSSSSSCSVLQCPESCTCSNNIVDCRGK
GLTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRS
LNSLVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQ
TIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIG
QIKSKKFRCSAREQYFIPGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPD
HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRITDIEEGTFEGASGVNELIL
TSNRLENIHHRMLKGLGGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGA
FDTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQSPYFLKEIPIQDVAVQD
FACEDGNDENSCSPVLRCPAECSCLDTVVRCSNKGLTTLPKGLPKETTELYLDGNHFTQV
PVELSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRL
LSLHGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCAGP
GDMTDKLLLTTPSKKFTCTGPVDVSIQAKCDPCLSSPCKNDGTCSNDPVHYYRCSCPYGF
KGQNCEEPIHACISNPCQNSGTCHLKEGEGSNFWCVCPEGFEGDTCEINIDDCEDNDCEN
NSTCVDGINNYTCMCSPEYTAATNEVERGELCEEKLDFCAPELNPCQHDSKCILTPQGYK
CECTPGYVGEHCELDYDDCEENKCQNGGQCIDAVNGYTCVCPEGYSGLFCEYAPPMVLPR
TSPCDNHECLNGAQCVVVGTDPRCQCLQGYEGESCETLVSVNFVNRESYLQLPSSLLAPE
TNISLQIATDEDSGVLLYKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFH
AVELVAADQTLSLSIDGGPPKSINSISKQSTLNIDSPLYLGGMPERASASGGLSSLQHSS
GGRNGTSFHGCLRNLYINGKLQDLGAGLGSGVAGSGTTQSTTRQWLGHGVEPGCQPCQTG
ACVQGDCHPTGHRGFTCTCHPGWTGTLCDQQVNNPCDGNKCIHGTCLPINSYSYSCRCQP
GFAGVLCDEQDQDPANPCSLSRCKHGKCRVSGLGKAYCECNSGYTGEACDREVACRGERV
RDVYQRQQGYAACQTQEKVSRLECRGSCPGGAEGQGTCCTPLRSKRRKYTFQCTDGSSFV
QEVEKVVKCGCTKCSS
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctctgagccccgttggccctggccgctccccggcgactgcgctggggctg
ctggtggtggctgctctggtcctggtcctgtccggcggagcggacggccagccatgcccg
acccagtgctcctgcaccgggaccacagtggactgtcacggccaagggctccgcagcgtg
ccccgtaacataccccgcaacgcggagagactggatctgaatgcgaacaacctcactaaa
atcaccaaggcggattttgcaggactgagacatctgcgagtgttgcagctaatggagaat
aaaatcagcaccatcgagagaggagccttccaggacctgaaggagctggagagactgcgc
ctgaatcggaataatctggctgtcttccccgagctgcttttcctgggaacgacgaagctc
tacagactggatctcagcgagaaccagattcagggagttccgaggaaagccttcagggga
gctgtggaaatcaagaacctccagttggactacaaccacatcagctgtatagaagatgga
gctttccgagcgttacgtgacctggaagtgctcaccctcaacaacaacaacatcagccga
ctgtctgtggccagtttcaaccacatgccgaagctcaggacctttcgcctgcactccaac
aacctgcagtgtgactgccacgtggcctggctttcggagtggctgcgacagcgcccccgc
ctgggtctctacacacagtgcatggccccgccacacttgaggggacacaacgtggcggag
gtgcagaagaaagagtttgtctgcacaggtcaccagtcgtcatcatcttcctcctgcagt
gtgttacagtgcccagagtcctgcacctgcagtaacaacattgtggactgcagagggaag
ggactgacagaaatacccaccaacctgcccgaaaccattactgagatacgactggagcag
aacgccatcaaggtgatcccagctggggccttttctccttataagaagctgcgcaggata
gatttgagtaataaccagatttcggagttagcgtcggacgccttccaaggtctgcgctcc
ctcaactctctggtactatacgggaacaagatcacggagatttccaagggactgttcgaa
ggattgttttctctgcagctattgttgctgaatgctaataagatagcgtgcctccgtgtg
gacgcatttcaggacctccacaacctcaatctgctctcgctatacgacaacaagctccag
accatcgccaaggggacgttctcgtcgctgagagccatacaaacacttcacttagcccaa
aacccatttatctgcgactgccatctgaagtggctggcagactaccttcaggacaatccc
atcgagacgagtggcgcccgctgcacgagcccccggcggctcgccaacaaacgaatcgga
caaatcaagagcaagaagttccgctgctcagccagagaacagtatttcatcccaggtacg
gaggattaccgcagtaagctaggaggggactgcttcgccgacctggcctgccccgagaag
tgccgttgtgagggcaccacggtcgactgctccaaccagaaactcaccaaaataccagat
cacatcccgcagtacactgcagaactgcgtctgaacaacaatgagttcactgtgctcgag
gcgacggggatcttcaaaaagttgcctcagctgaggaagatcaacctgagcaacaaccgt
atcaccgacatcgaggaggggacatttgaaggagcctcaggggtcaatgagctgattctg
acctccaacagactggagaacatacaccaccgcatgctgaagggactcggcggcctccgc
acactcatgctgaggagtaaccgcatcagctgtgtgagcaacagcagcttcgtggggttg
agctcagtgcgtctcctgtcgctctacgacaaccagatcacctccatgaacccaggagcc
ttcgacacgctgcactccctgtccacgctcaacctgctggccaatcccttcaactgtaac
tgtcacctggcctggctcggtgactggctgaggaggaagcgtatcgtcaccggtaaccct
cgctgccagagtccttatttcttaaaggagatccccatccaggatgtagctgtccaggac
ttcgcctgtgaagatggtaacgatgagaacagctgctctccggtgctgaggtgtccggca
gagtgttcctgtctggacactgtggtgcgctgcagcaacaagggcctcaccacgctgccc
aaaggcctgcccaaggagaccactgaactgtatctggatggaaaccacttcactcaggtt
cccgtggagctctccaattacaaacacttaacgctcattgatttgagtaacaaccagatc
agcacgttgtccaaccacagcctcagtaacatgtccgagctgcttaccctaatcctgagc
tacaaccgcctgcgctgcataccagtgagggcgtttgacgggctcaagtccctccgtctg
ctgtctctccatggtaacgacatatcactgataccagagggagccttcaaagacctgtca
tcgctctcccacctggctctgggcgccaaccctctgtactgtgactgccacatgcagtgg
ctgtcagactgggtgaagagcggctacaaggagcctggcatcgcccgctgtgccgggccc
ggcgacatgaccgacaaactgctgctcaccacgccttccaagaagttcacctgcacaggt
cccgtagatgtgagtatccaggctaaatgtgatccctgcctgtccagcccctgcaagaac
gatggcacatgctccaacgacccggtgcactactaccgctgcagctgcccctatggattc
aagggacagaactgtgaggagcccattcacgcctgtattagtaacccatgccagaacagc
ggcacctgccacctgaaggaaggagaagggagcaacttttggtgtgtgtgtccagagggc
tttgaaggcgacacctgcgagatcaacatcgacgactgcgaggataacgactgtgagaac
aactccacgtgcgtcgatggaatcaataactacacatgcatgtgctcaccagagtacaca
gctgctaccaatgaggtggagagaggggagctgtgtgaagagaaactggatttctgcgct
ccagagctgaacccatgtcagcatgactcaaagtgcattttgacccctcagggatacaag
tgtgagtgcactcccggctatgtaggtgagcactgtgagctggattatgacgactgtgag
gagaacaagtgtcagaacggaggtcagtgcattgatgccgtcaacggatacacctgcgtc
tgtccagagggatacagcgggttattctgcgagtacgctcccccgatggtccttcctcgc
acgagcccctgtgacaaccacgagtgcctcaacggggcgcagtgcgttgtcgtgggaacg
gacccccgctgccagtgtctccaaggttacgagggcgagagctgcgagacgctcgtcagc
gtcaacttcgtcaaccgtgagtcctacctgcagcttccctccagtctcctcgcaccggag
accaacatcagcctacagattgcgacagatgaggacagtggtgtgctgttgtataaaggg
gacaatgatcacatcgccatggagctgtacagggggcgcctcagggtcagctacgacacc
ggatcttaccctccgtctgccatatacagcgtggagacagtgaacgatggcagcttccac
gctgtggagctggtggcagcagaccagactttgtctctgtccatcgacggcgggccgcca
aaatccatcaactccatcagcaaacagtccacactcaacatagattctccgctttacctg
ggaggtatgccagaacgggcctcggcctccgggggtctctcatccctgcagcacagctca
ggaggacgcaacggcaccagcttccacggctgcctccgaaacctgtacatcaacgggaag
ctccaggacctgggggccgggctgggctcaggggtcgcaggctctgggactacacagagc
accaccagacagtggctgggccacggggtggagccaggctgccagccctgccagacaggc
gcctgcgtccagggtgactgccacccaacggggcaccgtggcttcacctgcacctgccac
ccgggctggacagggacactgtgtgaccagcaggtcaacaacccctgtgatggcaacaag
tgtatccacggcacctgccttccgatcaactcctactcatactcctgccgctgccagcct
ggttttgctggcgtgctgtgtgatgagcaggaccaggatccagcaaacccctgcagtctg
tctcggtgtaaacacggcaaatgccgagtgtcgggcctgggcaaggcgtactgcgagtgt
aacagtggatatacaggagaggcgtgcgacagagaggtggcctgccgaggagaacgggtc
cgagatgtctaccagagacagcaaggctacgcggcgtgccaaacccaggagaaggtctcc
cgcctagagtgtcggggcagctgcccggggggagcagaaggacagggcacctgctgcacc
cccctccgcagcaaacgcaggaaatacaccttccagtgcactgacggctcttctttcgtc
caggaagtggagaaggtggtcaagtgcggctgtacaaagtgttcctcataa
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integrated database retrieval system
