Acanthopagrus latus (yellowfin seabream): 119012943
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Entry
119012943 CDS
T08233
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
119012943 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
alat03051
]
119012943 (psmc6)
Proteasome [BR:
alat03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
119012943 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_22
AAA_2
RuvB_N
PRS7_OB
AAA_lid_PRS2_C
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_33
AAA_11
TIP49
AAA_18
RNA_helicase
AAA_3
Csa3_N
NPHP3_N
Mg_chelatase
AAA_24
bpMoxR
AAA_28
DUF5906
TsaE
NACHT
AAA_25
AAA_17
ATPase
DUF3829_2nd
Parvo_NS1
IstB_IS21
ATPase_2
GAS
Motif
Other DBs
NCBI-GeneID:
119012943
NCBI-ProteinID:
XP_036943088
LinkDB
All DBs
Position
22:3919288..3927117
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AA seq
389 aa
AA seq
DB search
MADTREKALQDYRKKLLEHKEVDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSSPITKHGEIDFEAIVKLSDGFNGADLRNVCTEAGLFAIRSDRE
YVTQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccagggagaaagcgctgcaggactacaggaaaaaattactcgaacacaaa
gaagttgacgggcggttaaaagaattgagagaacagctgagagaacaaactaaacagtac
gagaagtcagagaatgatctgaaggctcttcagagtgtcggccagattgttggagaagtg
ctcaaacagctgactgaggagaaattcattgttaaggccaccaatggcccccgatacgtg
gttggatgccgccgacagttggacaagtcacagctgaagccaggcaccagagtggctttg
gacatgacaacactcacaataatgaggtacctgcccagagaggtggaccctctggtgtac
aacatgtcccatgaggaccctggcagtgtctcctactctgagattggaggcttgtctgaa
cagatccgtgagctgagagaggtgatagagctgcctctgaccaaccctgagcttttccag
agagtagggatcatcccgcctaaaggctgtctgctctacgggcctccaggcactgggaag
actcttcttgccagagcagtggctagtcagctggactgtaacttcctcaaggtggtgtcc
agctctattgtggacaagtacattggtgagagtgccaggctgatcagagagatgttcaac
tacgctcgagaccaccagccatgcatcatttttatggatgagatcgatgccatcggtggc
cgtcgtttctctgagggaacctctgctgacagagagatccagaggactctgatggagctg
ctgaaccagatggacggcttcgacacactacacagagtcaagatgatcatggccaccaac
agaccggacactttggacccagccttgttgcggcctggaagactggatcgtaaaatccac
atcgaactgcccaatgaacaggctcgtctggacatcctcaagatccactccagtcccatt
accaagcacggagaaatagattttgaagccattgtgaagctgtcagatggtttcaatgga
gctgatctgagaaacgtgtgcacagaagcaggtttgtttgccatccgctctgaccgtgag
tatgtcacccaggaagacttcatgaaggctgtgaggaaggtggctgattctaagaagctg
gagtccaagcttgactacaagcctgtataa
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integrated database retrieval system
