Acanthopagrus latus (yellowfin seabream): 119013031
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Entry
119013031 CDS
T08233
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119013031 (stxbp5a)
Membrane trafficking [BR:
alat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119013031 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
119013031 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_VPS8
CFAP43_N
Synaptobrevin
VPS8_N
WD40_like
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
119013031
NCBI-ProteinID:
XP_036943248
LinkDB
All DBs
Position
22:15271963..15370875
Genome browser
AA seq
1143 aa
AA seq
DB search
MKKFNIRKVLDGLKEVSSSTPSVQVGPQENHLIQETIQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHETGAAVIQLQFLINEGALVSALADDSVHL
WNLRQKRPAILHSLKFNRERITFCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKKADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNVRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
NGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKGSTETSDDDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTEVVQLLE
VRMQYELNDMESPEGGGGGGEHSSAHPTPGASPQTSGPPSHPSTSSNNSDGGNIPCLKVR
STPLKQSPGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLVVFGNSNGLAVVDYVQKTVV
LNLGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSATSEDRCKSPTSVLTSNSNLQ
QFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDK
EAKEAVSSFHFSESFARKGDSTLTPCLYVGTSLGTVLALAITLPPAGEQRQLQPVIIAPT
GMLVRVKGSIMRMAFLDSTGALVPHAFEPWFEPNVTADGEEREKVRKRRPVSVSPSTSQD
LNESQYAVVCSEKQAKVISLPSQTCIYKHSITETSFILRADVVQMSQGACVACFCANGHI
MTLSVPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQDICENLQE
MLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGEIAAGKASRSLAQHIPGPGGIE
GMKGAASGIVGDLARARIALDERGQKLGELDERTAAMMASADSFSKHAHDMMLKCKDKKW
YQF
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacggcttgaaagaggtgtcctcctccacc
ccgtccgtccaagtggggccacaggagaaccatctgatccaggagaccatccagtccgag
catttccagctgtgcaagaccgtccgtcatggctttccctatcagccgtcatccatggct
tttgacccggtgcagaagatactggccatcgggacccagagcggggctctcagattgttt
ggtcgtccaggcgtggagtgttactgtcagcatgagactggagcggccgtcatccagcta
cagtttctcatcaatgagggagcgctggtgagtgctctggctgacgacagtgtccacctg
tggaacctgaggcagaagagacccgccatcctccactccctcaagttcaacagagagaga
ataacgttctgccacctgcccttccagagtaaatggttgtacatcggcacagaacgaggg
aacatccacatcgtcaacgtggagtcctttaccctctcaggctacgtcatcatgtggaac
aaagccatcgaactgtcctccaaggctcaccccggaccagtcgtccacataagtgacaac
cctatggatgagggaaagcttataattggatttgagtccgggatcgtggtcctgtgggat
ctgaaatcaaagaaggctgactatcgctacacttatgatgaggcgatccactcagttgcc
tggcatcacgagggcaagcagttcatttgcagtcactcagacgggactctgaccatatgg
aacgtcagaggccagggcaagcccatacagacaatcaccccacacggaaaacagcccaag
gatgggaagaagccagagccttgtaaacccattctcaaagtggagtacaaaaccactaga
aatggggaacccttcataatcctgtctggtggtctgtcgtatgacacggtgggccggcgg
ccttgtctgacggtaatgcatgggaagagtactgctgtgctggagatggactatcctata
gtagacttcctcacactctgtgaaacaccctacccaaatgattttcaggaaccttacgct
gtggtggtccttctagaaaaggatttagtggtgatcgaccttgcacaaaatggttacccc
atattcgagaacccctatcctctgactatccacgagtctcctgtgacctgctgcgagtac
ttcgccgactgccctgtggacctcatacctgcactttactctgttggatcgcggcagaaa
cgacagggctacagcaaaaaggaatggcctattagtggtgggaactggggtcaaggcaca
cagagctacccagagatcatcatcactgggcatgctgatggaactgtgaagttctgggat
gcctctgcaataatgctccaggtgctctataagctcaaaacagccaaggtgtttgacaga
aaccggtccaaggaggacaagggcagcaccgagacgtccgacgacgacccctttgctatt
cagatcatggcctggtgccctgagagccggatgctgtgtgtggccggggtgtcagccaac
gttatcatctaccgcttcagcaagctggaagtaactactgaggtggtgcagctactagag
gtgcgaatgcagtacgagctcaacgacatggagtctccagaaggcgggggtggaggggga
gaacactcgtcggcgcaccccactcccggcgcctcccctcagacgagtggcccgccttcg
cacccctccaccagcagcaacaactctgacggaggcaacataccctgcctcaaagtgcgc
agcactcccctgaagcagtctcccggttaccaggtagatttggtggtccagttagtgtgg
gtgagcggagagcctcctcagcagatcacaagtctcgcgctcaattcctcctacggcctt
gtggtgtttggcaacagtaatggtctggcggtggtggactacgtccagaagacggtggtg
ctcaacttggggacggtcgagctttacggctccaatgacccctaccagagacagccccgc
tcgccaagaaagacacgtcaaccctctggaggtctgtgcgacatcaacgagggctccgcc
acatcggaggaccgctgcaaatcccccacttcagtgttgacgtcaaacagcaatctacag
caattctacaatggaggtggtagaggagcaaagatgtcacggaaattaagcttgcctact
gagctaaagccagacttggtcctcctgtctgtatgcccgccgcggggtgccaacccatta
gaccaccgagacaattccttcagccgctcgcgctcctccagcgtcaccagcatcgacaag
gaggccaaggaggccgtcagctccttccacttcagcgagagcttcgcccggaagggggac
agcaccttgacgccctgcctgtacgtgggcacctccctgggcaccgtgctggctctagcc
atcacgctgccgcccgctggggagcagcggcaactgcagccggtcatcattgcgcctact
ggcatgttggtacgggtcaagggcagcatcatgcggatggctttcctcgactcgactggc
gccctggtgccacacgcgtttgagccgtggtttgagcccaacgtgacagcggatggcgag
gaaagagagaaggtccgcaagcgcaggcccgtctcggtgtccccctccacctcccaggac
ctcaatgagagccagtacgctgtggtgtgctcagaaaaacaggccaaagtcatctccctc
ccctcccagacctgcatctacaaacacagcatcaccgagacctccttcatcctgcgagcg
gacgtggtgcagatgagccagggcgcgtgtgtggcgtgcttctgcgccaacggccacatc
atgaccctcagcgtgccgggtctgagaccgctcatggatgtaaattacctgcctttgacg
gatatgcggatagccaggacgttctgcttcaccaacctgggtcaggccatgtacctctgc
tcccccactgagatccagaggatcacttacagccaggacatctgcgaaaacctacaggag
atgctgggcgaacttttcacaccagtggagacaccggaggcaccgaacagagggttcttc
aaaggtctcttcgggggcggagcacagtctctggacagagaggagctatttggcgagata
gccgctggaaaggcatcccgaagtttggcccagcacatcccaggccccggtggcatcgag
ggaatgaagggggccgcctccggtatagtcggagatctggcgcgcgcccggatagcgctg
gatgagagaggccagaaactgggcgagctggacgagaggacggctgccatgatggccagc
gcggattccttttccaaacatgcccatgatatgatgctgaagtgcaaagacaaaaagtgg
taccagttctga
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integrated database retrieval system
