Acanthopagrus latus (yellowfin seabream): 119013116
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Entry
119013116 CDS
T08233
Symbol
cul3b
Name
(RefSeq) cullin-3b isoform X1
KO
K03869
cullin 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
alat04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119013116 (cul3b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119013116 (cul3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119013116 (cul3b)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119013116 (cul3b)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
119013116 (cul3b)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
119013116 (cul3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
DUF6655
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
119013116
NCBI-ProteinID:
XP_036943394
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All DBs
Position
2:18554200..18568577
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AA seq
767 aa
AA seq
DB search
MSNLSKGPTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTDDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLG
KHSGRQLTLQHHMGSADLNATFYGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTI
LMLFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTV
NDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNV
LVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatctcagcaaaggccccaccaagaaggacaccaaaatgaggatacgggccttt
cctatgacaatggatgagaagtacgtcaacaatatctgggaccttctgaagaatgccatc
caggagattcagaggaagaacaacagtggcctaagcttcgaggaactgtacaggaacgcc
tacacaatggtcctccacaaacatggagagaagctgtacacgggcctgcgggaggtcgtt
accgaacaccttataaacaaagtacgagaagatgtcctcaactccctaaacaataacttc
ctccaaactctaaatcaggcctggaatgaccatcaaacagcaatggtgatgatcagagac
atcctcatgtatatggaccgggtttacgtacagcagaacaatgttgagaatgtctacaac
ctgggtcttatcatctttagagatcaggtggttcgttatggctgcatcagagaccacctc
cggcagaccctgctggatatgatcgcacgtgagaggaaaggggaggtggtggacaggggg
gccattagaaatgcctgccaaatgttaatgatccttggccttgaagggagatctgtttat
gaagaagactttgaggcaccgttcttagaaatgtctgcagaatttttccagatggagagc
cagaagttccttgcagaaaacagtgcgagtgtgtacataaagaaagtggaagccaggatc
aatgaggagatcgaacgggtgatgcactgcctggacaaatctacagaggagcctattgtc
aaggtggtggaacgtgagctcatttccaaacacatgaagacgatcgtagagatggagaat
tccggcctcgtccacatgctcaaaaacggcaagacagacgacttggcatgcatgtacaag
ctgttcagcagggttcccaatgggctgaagaccatgtgtgagtgcatgagctcatacctg
cgggagcaaggcaaagccctcgtgtcagaggagggggagggaaaaaacccagtagactac
atccagggtttgctggacctgaagtcacgtttcgaccggttcctccaggagtctttcaat
aatgaccggctcttcaaacagactatcgcaggcgactttgagtacttccttaatctcaac
tctcgttcgcctgagtacctctcactcttcattgatgacaagctgaagaaaggagttaaa
gggttgacagagcaagaggtggagtctatactggacaaggccatggtattgttccgcttc
atgcaggaaaaagatgtgtttgagaggtactacaagcagcacctggcccgcaggctgctc
accaacaagagcgtctctgatgactctgagaagaacatgatctccaagctcaagaccgag
tgcggctgtcagttcacctctaaactggagggcatgttccgggacatgagcatctccaac
accactatggatgagtttagacaacatctacagacaactggggtatcactcggaggggtt
gatctcactgtgagagtcctgaccacgggatactggccaacacaatcagcaacacctaag
tgcaacatccctccttcaccacgacatgcatttgaagtctttagaaggttttatcttggt
aagcacagcggcagacaactcacactgcagcaccatatgggctctgcagatctaaacgcc
accttctacggtcccatcaaaaaggaggacggatcagaggtcggcgtaggaggagcccag
gtaaccggttccaacactaggaagcacatcctgcaggtctccaccttccagatgaccatc
ctcatgctttttaacaacagagagaagtcgacctttgaggagatccagcaggagactgac
atcccagagagggagcttgtgcgagcgctgcagtctctagcctgtgggaagccaactcag
agagttctcaccaaggagcccaagtccaaggagattgagaacggccatgtgtttacagtc
aatgaccagtttacctccaaactgcaccgtgtcaaaatccagacagtggccgctaaacag
ggagagtcggacccagagaggaaggagacacgacagaaagtggacgacgacaggaagcat
gagatcgaagctgccatagttcgtatcatgaagtcaagaaagaagatgcagcacaatgtc
ttagtagccgaggtcacacagcagttgcgggcacgattcctccctagtcctgtagtcatc
aagaagcgcattgaaggactcattgagagggaatatttggcacgaacaccggaggaccgc
aaagtgtacacttacgtagcataa
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