Acanthopagrus latus (yellowfin seabream): 119013372
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Entry
119013372 CDS
T08233
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03030
DNA replication
alat03410
Base excision repair
alat03420
Nucleotide excision repair
alat03430
Mismatch repair
alat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119013372 (pold1)
03410 Base excision repair
119013372 (pold1)
03420 Nucleotide excision repair
119013372 (pold1)
03430 Mismatch repair
119013372 (pold1)
03440 Homologous recombination
119013372 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alat03032
]
119013372 (pold1)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119013372 (pold1)
Enzymes [BR:
alat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119013372 (pold1)
DNA replication proteins [BR:
alat03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
119013372 (pold1)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
119013372 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
119013372 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
119013372
NCBI-ProteinID:
XP_036943725
LinkDB
All DBs
Position
23:9901226..9911050
Genome browser
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPFIGGASQAKRGKTAGEWEDSPSQFEEELSMFDEAEMDAEEMEGQAGHDVI
PVGDLFSADLNPRWRRPHAPSLDPSSDSLVFQQIDLDYYLGEAVAGMPGQSQGKVPIVRM
FGVTDSGNSVCCHIHGFAPYFYVPAPSGFTSAHLGEFKKELNSVVLKDMRSNKDNISVTV
LAVDITRKENMYGYHGKRSLDFLRITMAMPRLIAPAKRLLELGFKFAHFPIQSYQPYEAN
IDFEIRFMVDTNVVGCCWIELSKGKYRVREEKSTGETDSRYPGKVSLCQYEVDVGWTDLI
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVN
LFPYLGRVRGIKSVLKDLNFQSKQMGRRENKTINMEGRVQFDLLQILLRDYKLRSYTLNA
VSYHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSAEKNSLAPEDFIKTPTGDMFVKSSVRKGLL
PEILENLLSARKRAKTELKKETDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTISNGFQADAKVIYGDTDSVMVKLGVATVREAMDIGR
EAAEWVSSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHEKMDCKGIETVRRDN
CPLVANLINTCLQKILIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGSAAYMKSEDPIYVLENTIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCK
AVLKTDAAVCDFCKKKESELYQKEIFHLSSLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaagacgcaatggtggcccttttattggtggtgcgtcccaggccaagcgg
ggtaaaacggctggtgaatgggaggacagtccatctcagtttgaagaagaattgtccatg
tttgacgaagcagagatggacgcagaggagatggagggacaggccggccatgatgttatt
cccgtaggtgacctcttctcagctgaccttaaccctcgttggcggcggcctcatgccccc
tcactggacccatcatctgacagtttggtgtttcagcagattgatctggactattattta
ggggaagctgttgcgggcatgcctggccagtcacagggaaaagtgccgatcgttagaatg
tttggggtgacagacagtggcaacagtgtgtgttgccacattcacggttttgcaccttac
ttctatgttcctgcaccaagtggtttcacgtctgcccatctgggtgaatttaaaaaagag
ttgaactctgttgtcctgaaggacatgagatccaacaaagacaacatctctgtcacagta
ttggctgtggacatcactcgcaaagagaacatgtatggttaccacgggaaacgtagtctg
gatttcttgcggataaccatggcgatgccccgtctcattgccccggctaaaagactgctg
gagctgggcttcaagtttgcgcatttccccatacagagttaccaaccctacgaagccaac
atagattttgagatcaggtttatggtggacactaatgtggttggatgctgctggattgaa
ctttccaagggcaagtacagagtacgggaggagaagagcacaggggagacagattctcgg
tacccaggcaaggtgtccttgtgtcagtacgaggtagatgtgggatggacagatttgata
agtcaccctgcggagggagactggcagaggattgctccactcagggtcctcagctttgac
attgagtgtgcaggaagaaaaggaatcttcccagaggcagacaaagaccctgtgattcag
atagcgtctatggtgcagcggcagggtgagacggagcccttcattcgcacagttttcact
ctacagtcctgtgccagcatcgtgggctctcagatattgtgttttacacaagagaaacag
ctactacagagctgggcagagtttttgaggactgtggacccagacatcattactggatac
aacatccagaactttgactttccctacttgctcaacagagcagctgctttaaaggtgaat
ctctttccctacctcggccgtgtgcgaggcatcaagtcagtcctgaaagaccttaacttc
cagagcaagcagatgggccgcagagaaaacaagaccataaatatggagggtcgggttcag
tttgatttactgcagattctcctcagggactacaaactgcgctcatacacactgaatgct
gtgagttatcactttctgcaagaacagaaagaggatgtgcaacactccatcatcactgat
ctgcagaatggcaacgaacagacgcgtcgtcgcttggctgtctactgcctgaaagacgcc
tatctcccgctgcgcttgctgcagaagctgatgtgtgtgatcaactacatggagatggca
agagtgacaggtgtgcctctcacctacctgctctcaagaggacagcagatcaaagttgtc
tctcagctgctgcgacaggccatgaaacaggacctggtcatgcctgttgtaaagaccgag
ggaggagaggactacactggagctactgtcattgagccagaaaaagggtattacagcgtt
cctattgccactttggatttctcctccttgtatccctccatcatgatggctcacaatctg
tgctacaccaccctgctgcagaaaggctcggcagaaaaaaacagtcttgcaccagaggac
ttcatcaagactccaactggtgatatgtttgtgaagagctccgtgaggaaaggacttctc
cctgagatcctggagaacctgctgtctgctaggaagagggccaaaacagagttgaagaag
gaaactgacccttttaagaggcaggtgctggacggccgacagctcgctctcaaaatcagc
gcaaactccgtgtatggcttcacaggtgcccaagttggcaagctgccctgcttagagatc
tcacagagtgtcactggttttggaagacagatgattgagcaaaccaaacagctggtggag
tccaagtacaccatttccaatggtttccaagctgatgccaaggtcatttatggggataca
gattccgtcatggttaagcttggagtcgccacagtcagggaggctatggatatcggaagg
gaggcagcagagtgggtgtcatcccactttgtaccgcccatcaagctggagtttgagaag
gtgtactacccatacctgctgatcaacaagaagcgctacgctggcctctatttctcatcg
agtgcagacacacatgaaaagatggactgtaaaggcattgagactgtccgtagagacaac
tgccccctggtggccaaccttatcaacacctgtctgcagaaaatcctcatagacagggat
ccccagggtgctgtggctcatgctaaagaagtgatctcggatcttctgtgcaaccgcatt
gacatcagccagctggtcatcaccaaggagctaacgcgaaccgcccaggagtatgccggc
aaacaggcacacgtggagctggctgagagaatgaggaaaagagatgctggcagtgccccg
aacctgggagaccgagttccttacgtcatcatcaaggctgcaaagggatcagcagcatac
atgaagtcagaggacccgatctatgtgctggagaacaccattcccatcgacacacaatac
tacctcgagcagcagctgtccaagcccctgctgagaatatttgagcccatcctgggagag
agcaaagcggagagcgtcctgctcaagggcgaccacacgcgctgtaagactgtgttgacc
tcaaaggtcggaggcctcatggcatttgctcagaagaggagcacctgcatcggctgcaaa
gctgtgcttaaaacagatgcggctgtgtgcgatttctgtaagaagaaggagtctgagctg
taccagaaggagatctttcacctgagctcactggaagagcgtttctctcgcctgtggact
cagtgtcagcgttgtcaaggctccctccatgaggatgtgctctgtaccagccgagactgt
cccatcttttacatgaggaagaaggttcagaaagacttggatgatcagagcaagctggtg
tctcgctttggatggtga
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